FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6567, 181 aa 1>>>pF1KE6567 181 - 181 aa - 181 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.2925+/-0.000747; mu= 1.9892+/- 0.046 mean_var=227.7682+/-45.925, 0's: 0 Z-trim(117.6): 5 B-trim: 75 in 1/54 Lambda= 0.084982 statistics sampled from 18416 (18419) to 18416 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.849), E-opt: 0.2 (0.566), width: 16 Scan time: 1.530 The best scores are: opt bits E(32554) CCDS14120.1 XG gene_id:7499|Hs108|chrX ( 180) 1316 172.5 1.3e-43 CCDS48073.1 XG gene_id:7499|Hs108|chrX ( 195) 967 129.7 1e-30 >>CCDS14120.1 XG gene_id:7499|Hs108|chrX (180 aa) initn: 1028 init1: 705 opt: 1316 Z-score: 896.6 bits: 172.5 E(32554): 1.3e-43 Smith-Waterman score: 1316; 99.4% identity (99.4% similar) in 181 aa overlap (1-181:1-180) 10 20 30 40 50 60 pF1KE6 MESWWGLPCLAFLCFLMHARGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MESWWGLPCLAFLCFLMHARGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGN ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: CCDS14 SGGNIYPRPKPRPQPQPGNSGNSGG-YFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGN 70 80 90 100 110 130 140 150 160 170 180 pF1KE6 SDNTHGGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNRRNCFRTHEPEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 SDNTHGGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNRRNCFRTHEPEN 120 130 140 150 160 170 pF1KE6 V : CCDS14 V 180 >>CCDS48073.1 XG gene_id:7499|Hs108|chrX (195 aa) initn: 792 init1: 684 opt: 967 Z-score: 664.9 bits: 129.7 E(32554): 1e-30 Smith-Waterman score: 1276; 91.8% identity (91.8% similar) in 196 aa overlap (1-181:1-195) 10 20 30 40 50 60 pF1KE6 MESWWGLPCLAFLCFLMHARGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 MESWWGLPCLAFLCFLMHARGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGN ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: CCDS48 SGGNIYPRPKPRPQPQPGNSGNSGG-YFNDVDRDDGRYPPRPRPRPPAGGGGGGYSSYGN 70 80 90 100 110 130 140 150 160 pF1KE6 SDNTHG---------------GDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFK :::::: ::::::::::::::::::::::::::::::::::::::: CCDS48 SDNTHGRGGYRLNSRYGNTYGGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFK 120 130 140 150 160 170 170 180 pF1KE6 LNNRRNCFRTHEPENV :::::::::::::::: CCDS48 LNNRRNCFRTHEPENV 180 190 181 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:28:32 2016 done: Tue Nov 8 14:28:32 2016 Total Scan time: 1.530 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]