FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6893, 365 aa 1>>>pF1KE6893 365 - 365 aa - 365 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3740+/-0.000355; mu= 16.8240+/- 0.022 mean_var=78.2849+/-15.588, 0's: 0 Z-trim(115.6): 8 B-trim: 170 in 1/53 Lambda= 0.144956 statistics sampled from 26152 (26160) to 26152 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.687), E-opt: 0.2 (0.307), width: 16 Scan time: 5.720 The best scores are: opt bits E(85289) NP_000139 (OMIM: 211100,616754) galactoside 2-alph ( 365) 2569 546.7 3.1e-155 XP_016882042 (OMIM: 211100,616754) PREDICTED: gala ( 365) 2569 546.7 3.1e-155 NP_001316806 (OMIM: 211100,616754) galactoside 2-a ( 365) 2569 546.7 3.1e-155 XP_016882041 (OMIM: 211100,616754) PREDICTED: gala ( 488) 2569 546.8 3.9e-155 XP_006723190 (OMIM: 211100,616754) PREDICTED: gala ( 488) 2569 546.8 3.9e-155 NP_000502 (OMIM: 182100,612542) galactoside 2-alph ( 343) 1413 304.9 1.8e-82 NP_001091107 (OMIM: 182100,612542) galactoside 2-a ( 343) 1413 304.9 1.8e-82 >>NP_000139 (OMIM: 211100,616754) galactoside 2-alpha-L- (365 aa) initn: 2569 init1: 2569 opt: 2569 Z-score: 2907.9 bits: 546.7 E(85289): 3.1e-155 Smith-Waterman score: 2569; 100.0% identity (100.0% similar) in 365 aa overlap (1-365:1-365) 10 20 30 40 50 60 pF1KE6 MWLRSHRQLCLAFLLVCVLSVIFFLHIHQDSFPHGLGLSILCPDRRLVTPPVAIFCLPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MWLRSHRQLCLAFLLVCVLSVIFFLHIHQDSFPHGLGLSILCPDRRLVTPPVAIFCLPGT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQYATLLALAQLNGRRAFILPAMHAAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 AMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQYATLLALAQLNGRRAFILPAMHAAL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 APVFRITLPVLAPEVDSRTPWRELQLHDWMSEEYADLRDPFLKLSGFPCSWTFFHHLREQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 APVFRITLPVLAPEVDSRTPWRELQLHDWMSEEYADLRDPFLKLSGFPCSWTFFHHLREQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 IRREFTLHDHLREEAQSVLGQLRLGRTGDRPRTFVGVHVRRGDYLQVMPQRWKGVVGDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 IRREFTLHDHLREEAQSVLGQLRLGRTGDRPRTFVGVHVRRGDYLQVMPQRWKGVVGDSA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 YLRQAMDWFRARHEAPVFVVTSNGMEWCKENIDTSQGDVTFAGDGQEATPWKDFALLTQC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 YLRQAMDWFRARHEAPVFVVTSNGMEWCKENIDTSQGDVTFAGDGQEATPWKDFALLTQC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 NHTIMTIGTFGFWAAYLAGGDTVYLANFTLPDSEFLKIFKPEAAFLPEWVGINADLSPLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 NHTIMTIGTFGFWAAYLAGGDTVYLANFTLPDSEFLKIFKPEAAFLPEWVGINADLSPLW 310 320 330 340 350 360 pF1KE6 TLAKP ::::: NP_000 TLAKP >>XP_016882042 (OMIM: 211100,616754) PREDICTED: galactos (365 aa) initn: 2569 init1: 2569 opt: 2569 Z-score: 2907.9 bits: 546.7 E(85289): 3.1e-155 Smith-Waterman score: 2569; 100.0% identity (100.0% similar) in 365 aa overlap (1-365:1-365) 10 20 30 40 50 60 pF1KE6 MWLRSHRQLCLAFLLVCVLSVIFFLHIHQDSFPHGLGLSILCPDRRLVTPPVAIFCLPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MWLRSHRQLCLAFLLVCVLSVIFFLHIHQDSFPHGLGLSILCPDRRLVTPPVAIFCLPGT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQYATLLALAQLNGRRAFILPAMHAAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQYATLLALAQLNGRRAFILPAMHAAL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 APVFRITLPVLAPEVDSRTPWRELQLHDWMSEEYADLRDPFLKLSGFPCSWTFFHHLREQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 APVFRITLPVLAPEVDSRTPWRELQLHDWMSEEYADLRDPFLKLSGFPCSWTFFHHLREQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 IRREFTLHDHLREEAQSVLGQLRLGRTGDRPRTFVGVHVRRGDYLQVMPQRWKGVVGDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IRREFTLHDHLREEAQSVLGQLRLGRTGDRPRTFVGVHVRRGDYLQVMPQRWKGVVGDSA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 YLRQAMDWFRARHEAPVFVVTSNGMEWCKENIDTSQGDVTFAGDGQEATPWKDFALLTQC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YLRQAMDWFRARHEAPVFVVTSNGMEWCKENIDTSQGDVTFAGDGQEATPWKDFALLTQC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 NHTIMTIGTFGFWAAYLAGGDTVYLANFTLPDSEFLKIFKPEAAFLPEWVGINADLSPLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NHTIMTIGTFGFWAAYLAGGDTVYLANFTLPDSEFLKIFKPEAAFLPEWVGINADLSPLW 310 320 330 340 350 360 pF1KE6 TLAKP ::::: XP_016 TLAKP >>NP_001316806 (OMIM: 211100,616754) galactoside 2-alpha (365 aa) initn: 2569 init1: 2569 opt: 2569 Z-score: 2907.9 bits: 546.7 E(85289): 3.1e-155 Smith-Waterman score: 2569; 100.0% identity (100.0% similar) in 365 aa overlap (1-365:1-365) 10 20 30 40 50 60 pF1KE6 MWLRSHRQLCLAFLLVCVLSVIFFLHIHQDSFPHGLGLSILCPDRRLVTPPVAIFCLPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MWLRSHRQLCLAFLLVCVLSVIFFLHIHQDSFPHGLGLSILCPDRRLVTPPVAIFCLPGT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQYATLLALAQLNGRRAFILPAMHAAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQYATLLALAQLNGRRAFILPAMHAAL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 APVFRITLPVLAPEVDSRTPWRELQLHDWMSEEYADLRDPFLKLSGFPCSWTFFHHLREQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 APVFRITLPVLAPEVDSRTPWRELQLHDWMSEEYADLRDPFLKLSGFPCSWTFFHHLREQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 IRREFTLHDHLREEAQSVLGQLRLGRTGDRPRTFVGVHVRRGDYLQVMPQRWKGVVGDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IRREFTLHDHLREEAQSVLGQLRLGRTGDRPRTFVGVHVRRGDYLQVMPQRWKGVVGDSA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 YLRQAMDWFRARHEAPVFVVTSNGMEWCKENIDTSQGDVTFAGDGQEATPWKDFALLTQC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YLRQAMDWFRARHEAPVFVVTSNGMEWCKENIDTSQGDVTFAGDGQEATPWKDFALLTQC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 NHTIMTIGTFGFWAAYLAGGDTVYLANFTLPDSEFLKIFKPEAAFLPEWVGINADLSPLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NHTIMTIGTFGFWAAYLAGGDTVYLANFTLPDSEFLKIFKPEAAFLPEWVGINADLSPLW 310 320 330 340 350 360 pF1KE6 TLAKP ::::: NP_001 TLAKP >>XP_016882041 (OMIM: 211100,616754) PREDICTED: galactos (488 aa) initn: 2569 init1: 2569 opt: 2569 Z-score: 2906.1 bits: 546.8 E(85289): 3.9e-155 Smith-Waterman score: 2569; 100.0% identity (100.0% similar) in 365 aa overlap (1-365:124-488) 10 20 30 pF1KE6 MWLRSHRQLCLAFLLVCVLSVIFFLHIHQD :::::::::::::::::::::::::::::: XP_016 GAAGCGLPLRRVRSGHEKRTVDLPPASSSAMWLRSHRQLCLAFLLVCVLSVIFFLHIHQD 100 110 120 130 140 150 40 50 60 70 80 90 pF1KE6 SFPHGLGLSILCPDRRLVTPPVAIFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNGRFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SFPHGLGLSILCPDRRLVTPPVAIFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNGRFG 160 170 180 190 200 210 100 110 120 130 140 150 pF1KE6 NQMGQYATLLALAQLNGRRAFILPAMHAALAPVFRITLPVLAPEVDSRTPWRELQLHDWM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NQMGQYATLLALAQLNGRRAFILPAMHAALAPVFRITLPVLAPEVDSRTPWRELQLHDWM 220 230 240 250 260 270 160 170 180 190 200 210 pF1KE6 SEEYADLRDPFLKLSGFPCSWTFFHHLREQIRREFTLHDHLREEAQSVLGQLRLGRTGDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SEEYADLRDPFLKLSGFPCSWTFFHHLREQIRREFTLHDHLREEAQSVLGQLRLGRTGDR 280 290 300 310 320 330 220 230 240 250 260 270 pF1KE6 PRTFVGVHVRRGDYLQVMPQRWKGVVGDSAYLRQAMDWFRARHEAPVFVVTSNGMEWCKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PRTFVGVHVRRGDYLQVMPQRWKGVVGDSAYLRQAMDWFRARHEAPVFVVTSNGMEWCKE 340 350 360 370 380 390 280 290 300 310 320 330 pF1KE6 NIDTSQGDVTFAGDGQEATPWKDFALLTQCNHTIMTIGTFGFWAAYLAGGDTVYLANFTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NIDTSQGDVTFAGDGQEATPWKDFALLTQCNHTIMTIGTFGFWAAYLAGGDTVYLANFTL 400 410 420 430 440 450 340 350 360 pF1KE6 PDSEFLKIFKPEAAFLPEWVGINADLSPLWTLAKP ::::::::::::::::::::::::::::::::::: XP_016 PDSEFLKIFKPEAAFLPEWVGINADLSPLWTLAKP 460 470 480 >>XP_006723190 (OMIM: 211100,616754) PREDICTED: galactos (488 aa) initn: 2569 init1: 2569 opt: 2569 Z-score: 2906.1 bits: 546.8 E(85289): 3.9e-155 Smith-Waterman score: 2569; 100.0% identity (100.0% similar) in 365 aa overlap (1-365:124-488) 10 20 30 pF1KE6 MWLRSHRQLCLAFLLVCVLSVIFFLHIHQD :::::::::::::::::::::::::::::: XP_006 GAAGCGLPLRRVRSGHEKRTVDLPPASSSAMWLRSHRQLCLAFLLVCVLSVIFFLHIHQD 100 110 120 130 140 150 40 50 60 70 80 90 pF1KE6 SFPHGLGLSILCPDRRLVTPPVAIFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNGRFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SFPHGLGLSILCPDRRLVTPPVAIFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNGRFG 160 170 180 190 200 210 100 110 120 130 140 150 pF1KE6 NQMGQYATLLALAQLNGRRAFILPAMHAALAPVFRITLPVLAPEVDSRTPWRELQLHDWM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 NQMGQYATLLALAQLNGRRAFILPAMHAALAPVFRITLPVLAPEVDSRTPWRELQLHDWM 220 230 240 250 260 270 160 170 180 190 200 210 pF1KE6 SEEYADLRDPFLKLSGFPCSWTFFHHLREQIRREFTLHDHLREEAQSVLGQLRLGRTGDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SEEYADLRDPFLKLSGFPCSWTFFHHLREQIRREFTLHDHLREEAQSVLGQLRLGRTGDR 280 290 300 310 320 330 220 230 240 250 260 270 pF1KE6 PRTFVGVHVRRGDYLQVMPQRWKGVVGDSAYLRQAMDWFRARHEAPVFVVTSNGMEWCKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PRTFVGVHVRRGDYLQVMPQRWKGVVGDSAYLRQAMDWFRARHEAPVFVVTSNGMEWCKE 340 350 360 370 380 390 280 290 300 310 320 330 pF1KE6 NIDTSQGDVTFAGDGQEATPWKDFALLTQCNHTIMTIGTFGFWAAYLAGGDTVYLANFTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 NIDTSQGDVTFAGDGQEATPWKDFALLTQCNHTIMTIGTFGFWAAYLAGGDTVYLANFTL 400 410 420 430 440 450 340 350 360 pF1KE6 PDSEFLKIFKPEAAFLPEWVGINADLSPLWTLAKP ::::::::::::::::::::::::::::::::::: XP_006 PDSEFLKIFKPEAAFLPEWVGINADLSPLWTLAKP 460 470 480 >>NP_000502 (OMIM: 182100,612542) galactoside 2-alpha-L- (343 aa) initn: 1436 init1: 866 opt: 1413 Z-score: 1601.7 bits: 304.9 E(85289): 1.8e-82 Smith-Waterman score: 1413; 67.7% identity (85.4% similar) in 294 aa overlap (66-359:49-340) 40 50 60 70 80 90 pF1KE6 LGLSILCPDRRLVTPPVAIFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQ ::.: :..: : ::. ::.:::::. NP_000 VFTVSTIFHVQQRLAKIQAMWELPVQIPVLASTSKALGPSQLRGMWTINAIGRLGNQMGE 20 30 40 50 60 70 100 110 120 130 140 150 pF1KE6 YATLLALAQLNGRRAFILPAMHAALAPVFRITLPVLAPEVDSRTPWRELQLHDWMSEEYA :::: :::..::: ::: ::..:::.:::::::: . :: ::.. .:.::: ::: NP_000 YATLYALAKMNGRPAFIPAQMHSTLAPIFRITLPVLHSATASRIPWQNYHLNDWMEEEYR 80 90 100 110 120 130 160 170 180 190 200 210 pF1KE6 DLRDPFLKLSGFPCSWTFFHHLREQIRREFTLHDHLREEAQSVLGQLRLGRTGDRPRTFV . .....:.::::::.::::..: .:::::::.:::::. : :... :.:: ::: NP_000 HIPGEYVRFTGYPCSWTFYHHLRQEILQEFTLHDHVREEAQKFLRGLQVN--GSRPGTFV 140 150 160 170 180 190 220 230 240 250 260 270 pF1KE6 GVHVRRGDYLQVMPQRWKGVVGDSAYLRQAMDWFRARHEAPVFVVTSNGMEWCKENIDTS :::::::::..:::. :::::.: ::.::.::::::. . .:::::::: ::.:::::: NP_000 GVHVRRGDYVHVMPKVWKGVVADRRYLQQALDWFRARYSSLIFVVTSNGMAWCRENIDTS 200 210 220 230 240 250 280 290 300 310 320 330 pF1KE6 QGDVTFAGDGQEATPWKDFALLTQCNHTIMTIGTFGFWAAYLAGGDTVYLANFTLPDSEF .:::.::::: :..: ::::::::::::::::::::.:::::.::::.::::.::::: : NP_000 HGDVVFAGDGIEGSPAKDFALLTQCNHTIMTIGTFGIWAAYLTGGDTIYLANYTLPDSPF 260 270 280 290 300 310 340 350 360 pF1KE6 LKIFKPEAAFLPEWVGINADLSPLWTLAKP ::::::::::::::.:: :::::: NP_000 LKIFKPEAAFLPEWTGIAADLSPLLKH 320 330 340 >>NP_001091107 (OMIM: 182100,612542) galactoside 2-alpha (343 aa) initn: 1436 init1: 866 opt: 1413 Z-score: 1601.7 bits: 304.9 E(85289): 1.8e-82 Smith-Waterman score: 1413; 67.7% identity (85.4% similar) in 294 aa overlap (66-359:49-340) 40 50 60 70 80 90 pF1KE6 LGLSILCPDRRLVTPPVAIFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNGRFGNQMGQ ::.: :..: : ::. ::.:::::. NP_001 VFTVSTIFHVQQRLAKIQAMWELPVQIPVLASTSKALGPSQLRGMWTINAIGRLGNQMGE 20 30 40 50 60 70 100 110 120 130 140 150 pF1KE6 YATLLALAQLNGRRAFILPAMHAALAPVFRITLPVLAPEVDSRTPWRELQLHDWMSEEYA :::: :::..::: ::: ::..:::.:::::::: . :: ::.. .:.::: ::: NP_001 YATLYALAKMNGRPAFIPAQMHSTLAPIFRITLPVLHSATASRIPWQNYHLNDWMEEEYR 80 90 100 110 120 130 160 170 180 190 200 210 pF1KE6 DLRDPFLKLSGFPCSWTFFHHLREQIRREFTLHDHLREEAQSVLGQLRLGRTGDRPRTFV . .....:.::::::.::::..: .:::::::.:::::. : :... :.:: ::: NP_001 HIPGEYVRFTGYPCSWTFYHHLRQEILQEFTLHDHVREEAQKFLRGLQVN--GSRPGTFV 140 150 160 170 180 190 220 230 240 250 260 270 pF1KE6 GVHVRRGDYLQVMPQRWKGVVGDSAYLRQAMDWFRARHEAPVFVVTSNGMEWCKENIDTS :::::::::..:::. :::::.: ::.::.::::::. . .:::::::: ::.:::::: NP_001 GVHVRRGDYVHVMPKVWKGVVADRRYLQQALDWFRARYSSLIFVVTSNGMAWCRENIDTS 200 210 220 230 240 250 280 290 300 310 320 330 pF1KE6 QGDVTFAGDGQEATPWKDFALLTQCNHTIMTIGTFGFWAAYLAGGDTVYLANFTLPDSEF .:::.::::: :..: ::::::::::::::::::::.:::::.::::.::::.::::: : NP_001 HGDVVFAGDGIEGSPAKDFALLTQCNHTIMTIGTFGIWAAYLTGGDTIYLANYTLPDSPF 260 270 280 290 300 310 340 350 360 pF1KE6 LKIFKPEAAFLPEWVGINADLSPLWTLAKP ::::::::::::::.:: :::::: NP_001 LKIFKPEAAFLPEWTGIAADLSPLLKH 320 330 340 365 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 03:17:10 2016 done: Tue Nov 8 03:17:11 2016 Total Scan time: 5.720 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]