Result of FASTA (ccds) for
pFN21AE6673
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6673, 309 aa
1>>>pF1KE6673 309 - 309 aa - 309 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8086+/-0.000779; mu= 14.0777+/- 0.047
mean_var=81.8015+/-16.095, 0's: 0 Z-trim(108.9): 42 B-trim: 0 in 0/52
Lambda= 0.141806
statistics sampled from 10611 (10650) to 10611 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.319), width: 16
Scan time: 1.140
The best scores are: opt bits E(33420)
CCDS12053.1 CNN2 gene_id:1265|Hs109|chr19 ( 309) 2108 440.6 7.5e-124
CCDS30775.1 CNN3 gene_id:1266|Hs109|chr1 ( 329) 1324 280.2 1.5e-75
CCDS77204.1 CNN2 gene_id:1265|Hs109|chr19 ( 298) 1258 266.7 1.6e-71
CCDS77205.1 CNN2 gene_id:1265|Hs109|chr19 ( 330) 1254 265.9 3.1e-71
CCDS12263.1 CNN1 gene_id:1264|Hs109|chr19 ( 297) 1217 258.3 5.4e-69
CCDS65592.1 CNN3 gene_id:1266|Hs109|chr1 ( 288) 1129 240.3 1.4e-63
CCDS12054.1 CNN2 gene_id:1265|Hs109|chr19 ( 270) 1010 215.9 2.8e-56
CCDS77238.1 CNN1 gene_id:1264|Hs109|chr19 ( 247) 985 210.8 9e-55
CCDS65593.1 CNN3 gene_id:1266|Hs109|chr1 ( 283) 736 159.9 2.2e-39
CCDS1189.1 TAGLN2 gene_id:8407|Hs109|chr1 ( 199) 390 89.0 3.3e-18
CCDS60314.1 TAGLN2 gene_id:8407|Hs109|chr1 ( 220) 390 89.0 3.6e-18
CCDS33816.1 TAGLN3 gene_id:29114|Hs109|chr3 ( 199) 373 85.5 3.7e-17
CCDS8381.1 TAGLN gene_id:6876|Hs109|chr11 ( 201) 323 75.3 4.5e-14
>>CCDS12053.1 CNN2 gene_id:1265|Hs109|chr19 (309 aa)
initn: 2108 init1: 2108 opt: 2108 Z-score: 2337.2 bits: 440.6 E(33420): 7.5e-124
Smith-Waterman score: 2108; 100.0% identity (100.0% similar) in 309 aa overlap (1-309:1-309)
10 20 30 40 50 60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
250 260 270 280 290 300
pF1KE6 PYYQEEAGY
:::::::::
CCDS12 PYYQEEAGY
>>CCDS30775.1 CNN3 gene_id:1266|Hs109|chr1 (329 aa)
initn: 1503 init1: 1201 opt: 1324 Z-score: 1470.0 bits: 280.2 E(33420): 1.5e-75
Smith-Waterman score: 1324; 65.5% identity (81.6% similar) in 310 aa overlap (4-306:2-311)
10 20 30 40 50 60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
:.:::::::::::::::.. :::: : : .::.::: .::.::::.:: ::::: ::
CCDS30 MTHFNKGPSYGLSAEVKNKIASKYDHQAEEDLRNWIEEVTGMSIGPNFQLGLKDGIIL
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
: :.:::::::: :.:.: :: ::::..:::::. .:::.: :.::::::::.::::::
CCDS30 CELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
:..:.:::: :::::... .::::::.::: : ::.. .:::: ::::::::::::::.:
CCDS30 QTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
:::::::::::::: . :.:..:::::::::: :::.:: :::::: ::: :: .
CCDS30 MTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPV
180 190 200 210 220 230
250 260 270 280 290
pF1KE6 DNSSMSLQMGYTQGANQSGQ-VFGLGRQIYDPKYC--PQGTVADGAPSGTG----DCPDP
:::..::::: .. :.:.:. :.:::::.:::::: : : .. .::: . :
CCDS30 DNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDS
240 250 260 270 280 290
300
pF1KE6 GEVPEYPPYYQEEAGY
::: :. :
CCDS30 DYQAEYPDEYHGEYQDDYPRDYQYSDQGIDY
300 310 320
>>CCDS77204.1 CNN2 gene_id:1265|Hs109|chr19 (298 aa)
initn: 1254 init1: 1254 opt: 1258 Z-score: 1397.7 bits: 266.7 E(33420): 1.6e-71
Smith-Waterman score: 2015; 96.4% identity (96.4% similar) in 309 aa overlap (1-309:1-298)
10 20 30 40 50 60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQ-
70 80 90 100 110
130 140 150 160 170 180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 ----------AKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
120 130 140 150 160
190 200 210 220 230 240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE6 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
230 240 250 260 270 280
pF1KE6 PYYQEEAGY
:::::::::
CCDS77 PYYQEEAGY
290
>>CCDS77205.1 CNN2 gene_id:1265|Hs109|chr19 (330 aa)
initn: 1254 init1: 1254 opt: 1254 Z-score: 1392.6 bits: 265.9 E(33420): 3.1e-71
Smith-Waterman score: 2056; 93.6% identity (93.6% similar) in 330 aa overlap (1-309:1-330)
10 20 30 40 50 60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
70 80 90 100 110 120
130 140 150
pF1KE6 QVSLLALAGK---------------------AKTKGLQSGVDIGVKYSEKQERNFDDATM
:::::::::: :::::::::::::::::::::::::::::
CCDS77 QVSLLALAGKGLDLGSLAALCWYSRPLSLTQAKTKGLQSGVDIGVKYSEKQERNFDDATM
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE6 KAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 KAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQV
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE6 GMTAPGTRRHIYDTKLGTDKCDNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 GMTAPGTRRHIYDTKLGTDKCDNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTV
250 260 270 280 290 300
280 290 300
pF1KE6 ADGAPSGTGDCPDPGEVPEYPPYYQEEAGY
::::::::::::::::::::::::::::::
CCDS77 ADGAPSGTGDCPDPGEVPEYPPYYQEEAGY
310 320 330
>>CCDS12263.1 CNN1 gene_id:1264|Hs109|chr19 (297 aa)
initn: 1449 init1: 636 opt: 1217 Z-score: 1352.4 bits: 258.3 E(33420): 5.4e-69
Smith-Waterman score: 1217; 65.8% identity (85.8% similar) in 275 aa overlap (1-274:1-273)
10 20 30 40 50 60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
:::..::.::.:::::::::.: .::: :.: ::: ::::.:: :: .:. ::::: ::
CCDS12 MSSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
: ..:::::::: :::.: ::::::::..:::::...::..: :.::::::::. : :::
CCDS12 CEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
: .:::::. ::::: . :..::::.:::::.:. . .. :. .::::::::: :::.:
CCDS12 QSTLLALASMAKTKG--NKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQG
130 140 150 160 170
190 200 210 220 230 240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
:::::::::::::: :.:..:::::::::: :::.:::::::.:.:.. :: ..:
CCDS12 MTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHC
180 190 200 210 220 230
250 260 270 280 290
pF1KE6 DNSSMSLQMGYTQGANQSGQ-VFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEY
:. ..::::: ..::.: :. :.:: ::.::::::
CCDS12 DTLNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
240 250 260 270 280 290
300
pF1KE6 PPYYQEEAGY
>>CCDS65592.1 CNN3 gene_id:1266|Hs109|chr1 (288 aa)
initn: 1311 init1: 1009 opt: 1129 Z-score: 1255.3 bits: 240.3 E(33420): 1.4e-63
Smith-Waterman score: 1129; 64.4% identity (80.7% similar) in 270 aa overlap (44-306:1-270)
20 30 40 50 60 70
pF1KE6 LSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTILCTLMNKLQPGSVP
.::::.:: ::::: ::: :.::::::::
CCDS65 MSIGPNFQLGLKDGIILCELINKLQPGSVK
10 20 30
80 90 100 110 120 130
pF1KE6 KINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQVQVSLLALAGKAKT
:.:.: :: ::::..:::::. .:::.: :.::::::::.:::::::..:.:::: :::
CCDS65 KVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKT
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE6 KGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDP
::... .::::::.::: : ::.. .:::: ::::::::::::::.::::::::::::::
CCDS65 KGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDP
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE6 KNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKCDNSSMSLQMGYTQ
: . :.:..:::::::::: :::.:: :::::: ::: :: . :::..::::: ..
CCDS65 KMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNK
160 170 180 190 200 210
260 270 280 290 300
pF1KE6 GANQSGQ-VFGLGRQIYDPKYC--PQGTVADGAPSGTG----DCPDPGEVPEYPPYYQEE
:.:.:. :.:::::.:::::: : : .. .::: . : ::: :. :
CCDS65 VASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGE
220 230 240 250 260 270
pF1KE6 AGY
CCDS65 YQDDYPRDYQYSDQGIDY
280
>>CCDS12054.1 CNN2 gene_id:1265|Hs109|chr19 (270 aa)
initn: 1000 init1: 1000 opt: 1010 Z-score: 1124.1 bits: 215.9 E(33420): 2.8e-56
Smith-Waterman score: 1766; 87.4% identity (87.4% similar) in 309 aa overlap (1-309:1-270)
10 20 30 40 50 60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
:::::::::: :::::::::::
CCDS12 QVSLLALAGK---------------------------------------MGTNKCASQSG
130 140
190 200 210 220 230 240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE6 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 DNSSMSLQMGYTQGANQSGQVFGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYP
210 220 230 240 250 260
pF1KE6 PYYQEEAGY
:::::::::
CCDS12 PYYQEEAGY
270
>>CCDS77238.1 CNN1 gene_id:1264|Hs109|chr19 (247 aa)
initn: 1217 init1: 529 opt: 985 Z-score: 1097.0 bits: 210.8 E(33420): 9e-55
Smith-Waterman score: 985; 65.9% identity (86.1% similar) in 223 aa overlap (53-274:3-223)
30 40 50 60 70 80
pF1KE6 LSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTILCTLMNKLQPGSVPKINRSMQNW
::::: ::: ..:::::::: :::.: :::
CCDS77 MDGLKDGIILCEFINKLQPGSVKKINESTQNW
10 20 30
90 100 110 120 130 140
pF1KE6 HQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQVQVSLLALAGKAKTKGLQSGVDI
:::::..:::::...::..: :.::::::::. : :::: .:::::. ::::: . :..
CCDS77 HQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKG--NKVNV
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE6 GVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSGMTAYGTRRHLYDPKNHILPPMD
::::.:::::.:. . .. :. .::::::::: :::.::::::::::::::: :.:
CCDS77 GVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLD
100 110 120 130 140 150
210 220 230 240 250 260
pF1KE6 HSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKCDNSSMSLQMGYTQGANQSGQ-V
..:::::::::: :::.:::::::.:.:.. :: ..::. ..::::: ..::.: :. :
CCDS77 QATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDTLNVSLQMGSNKGASQRGMTV
160 170 180 190 200 210
270 280 290 300
pF1KE6 FGLGRQIYDPKYCPQGTVADGAPSGTGDCPDPGEVPEYPPYYQEEAGY
.:: ::.::::::
CCDS77 YGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA
220 230 240
>>CCDS65593.1 CNN3 gene_id:1266|Hs109|chr1 (283 aa)
initn: 1271 init1: 589 opt: 736 Z-score: 820.9 bits: 159.9 E(33420): 2.2e-39
Smith-Waterman score: 1004; 54.8% identity (67.7% similar) in 310 aa overlap (4-306:2-265)
10 20 30 40 50 60
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIGPDFQKGLKDGTIL
:.:::::::::::::::.. :::: : : .::.::: .::.::::.:: ::::: ::
CCDS65 MTHFNKGPSYGLSAEVKNKIASKYDHQAEEDLRNWIEEVTGMSIGPNFQLGLKDGIIL
10 20 30 40 50
70 80 90 100 110 120
pF1KE6 CTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNMTQV
: :.:::::::: :.:.: :: :
CCDS65 CELINKLQPGSVKKVNESSLNWPQ------------------------------------
60 70 80
130 140 150 160 170 180
pF1KE6 QVSLLALAGKAKTKGLQSGVDIGVKYSEKQERNFDDATMKAGQCVIGLQMGTNKCASQSG
:::::... .::::::.::: : ::.. .:::: ::::::::::::::.:
CCDS65 ----------AKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAG
90 100 110 120 130
190 200 210 220 230 240
pF1KE6 MTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRRHIYDTKLGTDKC
:::::::::::::: . :.:..:::::::::: :::.:: :::::: ::: :: .
CCDS65 MTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPV
140 150 160 170 180 190
250 260 270 280 290
pF1KE6 DNSSMSLQMGYTQGANQSGQ-VFGLGRQIYDPKYC--PQGTVADGAPSGTG----DCPDP
:::..::::: .. :.:.:. :.:::::.:::::: : : .. .::: . :
CCDS65 DNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDS
200 210 220 230 240 250
300
pF1KE6 GEVPEYPPYYQEEAGY
::: :. :
CCDS65 DYQAEYPDEYHGEYQDDYPRDYQYSDQGIDY
260 270 280
>>CCDS1189.1 TAGLN2 gene_id:8407|Hs109|chr1 (199 aa)
initn: 461 init1: 157 opt: 390 Z-score: 440.6 bits: 89.0 E(33420): 3.3e-18
Smith-Waterman score: 471; 43.4% identity (69.9% similar) in 196 aa overlap (7-190:3-198)
10 20 30 40 50
pF1KE6 MSSTQFNKGPSYGLSAEVKNRLLSKYDPQKEAELRTWIEGLTGLSIG-P-----DFQKGL
:.::.:::: ::.... ..:: . : : :: ..: : .::. :
CCDS11 MANRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWL
10 20 30 40 50
60 70 80 90 100 110
pF1KE6 KDGTILCTLMNKLQP-GSVP--KINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDL
::::.:: :.: : : :..: ::. : . ..:.:..:.:..: ::.: .:.:.. ::
CCDS11 KDGTVLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDL
60 70 80 90 100 110
120 130 140 150 160
pF1KE6 FESGNMTQVQVSLLALAGKA--KTKGLQSG-VDIGVKYSEKQERNFDDATMKAGQCVIGL
.:. ::. :: .:. :.: : . :: :: . : :... :::.: .. :. ::::
CCDS11 WEGKNMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE6 QMGTNKCASQSGMTAYGTRRHLYDPKNHILPPMDHSTISLQMGTNKCASQVGMTAPGTRR
:::::. :::.:::.:: :..
CCDS11 QMGTNRGASQAGMTGYGMPRQIL
180 190
309 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Jul 16 16:09:18 2019 done: Tue Jul 16 16:09:18 2019
Total Scan time: 1.140 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]