FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6650, 234 aa 1>>>pF1KE6650 234 - 234 aa - 234 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6668+/-0.000847; mu= 11.8201+/- 0.051 mean_var=60.5410+/-12.406, 0's: 0 Z-trim(105.8): 25 B-trim: 454 in 1/50 Lambda= 0.164835 statistics sampled from 8577 (8600) to 8577 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.65), E-opt: 0.2 (0.264), width: 16 Scan time: 1.280 The best scores are: opt bits E(32554) CCDS41999.1 INF2 gene_id:64423|Hs108|chr14 ( 234) 1503 365.8 1.4e-101 CCDS45173.1 INF2 gene_id:64423|Hs108|chr14 (1240) 1503 365.9 6.7e-101 CCDS9989.2 INF2 gene_id:64423|Hs108|chr14 (1249) 1503 365.9 6.7e-101 CCDS46429.1 FMNL2 gene_id:114793|Hs108|chr2 (1092) 293 78.2 2.5e-14 CCDS58323.1 DAAM1 gene_id:23002|Hs108|chr14 (1068) 292 77.9 2.9e-14 CCDS9737.1 DAAM1 gene_id:23002|Hs108|chr14 (1078) 292 77.9 2.9e-14 CCDS41780.1 FMNL3 gene_id:91010|Hs108|chr12 ( 976) 291 77.7 3.1e-14 CCDS44874.1 FMNL3 gene_id:91010|Hs108|chr12 (1027) 285 76.2 8.7e-14 CCDS11497.1 FMNL1 gene_id:752|Hs108|chr17 (1100) 285 76.3 9.3e-14 CCDS54999.1 DAAM2 gene_id:23500|Hs108|chr6 (1067) 282 75.5 1.5e-13 CCDS56426.1 DAAM2 gene_id:23500|Hs108|chr6 (1068) 282 75.5 1.5e-13 CCDS58297.1 DIAPH3 gene_id:81624|Hs108|chr13 (1112) 251 68.2 2.6e-11 CCDS58294.1 DIAPH3 gene_id:81624|Hs108|chr13 (1123) 251 68.2 2.6e-11 CCDS58295.1 DIAPH3 gene_id:81624|Hs108|chr13 (1147) 251 68.2 2.6e-11 CCDS58296.1 DIAPH3 gene_id:81624|Hs108|chr13 (1182) 251 68.2 2.7e-11 CCDS41898.1 DIAPH3 gene_id:81624|Hs108|chr13 (1193) 251 68.2 2.7e-11 >>CCDS41999.1 INF2 gene_id:64423|Hs108|chr14 (234 aa) initn: 1503 init1: 1503 opt: 1503 Z-score: 1937.1 bits: 365.8 E(32554): 1.4e-101 Smith-Waterman score: 1503; 100.0% identity (100.0% similar) in 234 aa overlap (1-234:1-234) 10 20 30 40 50 60 pF1KE6 MSVKEGAQRKWAALKEKLGPQDSDPTEANLESADPELCIRLLQMPSVVNYSGLRKRLEGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MSVKEGAQRKWAALKEKLGPQDSDPTEANLESADPELCIRLLQMPSVVNYSGLRKRLEGS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 DGGWMVQFLEQSGLDLLLEALARLSGRGVARISDALLQLTCVSCVRAVMNSRQGIEYILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 DGGWMVQFLEQSGLDLLLEALARLSGRGVARISDALLQLTCVSCVRAVMNSRQGIEYILS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 NQGYVRQLSQALDTSNVMVKKQVFELLAALCIYSPEGHVLTLDALDHYKTVCSQQYRFSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 NQGYVRQLSQALDTSNVMVKKQVFELLAALCIYSPEGHVLTLDALDHYKTVCSQQYRFSI 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 VMNELSGSDNVPYVVTLLSVINAVILGPEDLRARTQLRNEFIGLQLLDVLARLR :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 VMNELSGSDNVPYVVTLLSVINAVILGPEDLRARTQLRNEFIGLQLLDVLARLR 190 200 210 220 230 >>CCDS45173.1 INF2 gene_id:64423|Hs108|chr14 (1240 aa) initn: 1503 init1: 1503 opt: 1503 Z-score: 1925.0 bits: 365.9 E(32554): 6.7e-101 Smith-Waterman score: 1503; 100.0% identity (100.0% similar) in 234 aa overlap (1-234:1-234) 10 20 30 40 50 60 pF1KE6 MSVKEGAQRKWAALKEKLGPQDSDPTEANLESADPELCIRLLQMPSVVNYSGLRKRLEGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MSVKEGAQRKWAALKEKLGPQDSDPTEANLESADPELCIRLLQMPSVVNYSGLRKRLEGS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 DGGWMVQFLEQSGLDLLLEALARLSGRGVARISDALLQLTCVSCVRAVMNSRQGIEYILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 DGGWMVQFLEQSGLDLLLEALARLSGRGVARISDALLQLTCVSCVRAVMNSRQGIEYILS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 NQGYVRQLSQALDTSNVMVKKQVFELLAALCIYSPEGHVLTLDALDHYKTVCSQQYRFSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 NQGYVRQLSQALDTSNVMVKKQVFELLAALCIYSPEGHVLTLDALDHYKTVCSQQYRFSI 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 VMNELSGSDNVPYVVTLLSVINAVILGPEDLRARTQLRNEFIGLQLLDVLARLR :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 VMNELSGSDNVPYVVTLLSVINAVILGPEDLRARTQLRNEFIGLQLLDVLARLRDLEDAD 190 200 210 220 230 240 CCDS45 LLIQLEAFEEAKAEDEEELLRVSGGVDMSSHQEVFASLFHKVSCSPVSAQLLSVLQGLLH 250 260 270 280 290 300 >>CCDS9989.2 INF2 gene_id:64423|Hs108|chr14 (1249 aa) initn: 1503 init1: 1503 opt: 1503 Z-score: 1924.9 bits: 365.9 E(32554): 6.7e-101 Smith-Waterman score: 1503; 100.0% identity (100.0% similar) in 234 aa overlap (1-234:1-234) 10 20 30 40 50 60 pF1KE6 MSVKEGAQRKWAALKEKLGPQDSDPTEANLESADPELCIRLLQMPSVVNYSGLRKRLEGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 MSVKEGAQRKWAALKEKLGPQDSDPTEANLESADPELCIRLLQMPSVVNYSGLRKRLEGS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 DGGWMVQFLEQSGLDLLLEALARLSGRGVARISDALLQLTCVSCVRAVMNSRQGIEYILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 DGGWMVQFLEQSGLDLLLEALARLSGRGVARISDALLQLTCVSCVRAVMNSRQGIEYILS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 NQGYVRQLSQALDTSNVMVKKQVFELLAALCIYSPEGHVLTLDALDHYKTVCSQQYRFSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 NQGYVRQLSQALDTSNVMVKKQVFELLAALCIYSPEGHVLTLDALDHYKTVCSQQYRFSI 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 VMNELSGSDNVPYVVTLLSVINAVILGPEDLRARTQLRNEFIGLQLLDVLARLR :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 VMNELSGSDNVPYVVTLLSVINAVILGPEDLRARTQLRNEFIGLQLLDVLARLRDLEDAD 190 200 210 220 230 240 CCDS99 LLIQLEAFEEAKAEDEEELLRVSGGVDMSSHQEVFASLFHKVSCSPVSAQLLSVLQGLLH 250 260 270 280 290 300 >>CCDS46429.1 FMNL2 gene_id:114793|Hs108|chr2 (1092 aa) initn: 286 init1: 177 opt: 293 Z-score: 370.8 bits: 78.2 E(32554): 2.5e-14 Smith-Waterman score: 293; 34.1% identity (70.4% similar) in 135 aa overlap (101-234:224-357) 80 90 100 110 120 130 pF1KE6 QSGLDLLLEALARLSGRGVARISDALLQLTCVSCVRAVMNSRQGIEYILSNQGYVRQLSQ :. :.::.:: . :.....:. : ... CCDS46 RHSALRYNTLPSRRTLKNSRLVSKKDDVHVCIMCLRAIMNYQYGFNMVMSHPHAVNEIAL 200 210 220 230 240 250 140 150 160 170 180 190 pF1KE6 ALDTSNVMVKKQVFELLAALCIYSPEGHVLTLDALDHYKTVCSQQYRFSIVMNELSGSDN .:...: .: :.:::::.:. :: . :.:.:..: ::... :: .:... . :: CCDS46 SLNNKNPRTKALVLELLAAVCLVRG-GHEIILSAFDNFKEVCGEKQRFEKLMEHFRNEDN 260 270 280 290 300 310 200 210 220 230 pF1KE6 -VPYVVTLLSVINAVILGPEDLRARTQLRNEFIGLQLLDVLARLR . ..:. .. :: :. . ::. :..:. :: : : . : .:. CCDS46 NIDFMVASMQFINIVVHSVEDMNFRVHLQYEFTKLGLDEYLDKLKHTESDKLQVQIQAYL 320 330 340 350 360 370 CCDS46 DNVFDVGALLEDAETKNAALERVEELEENISHLSEKLQDTENEAMSKIVELEKQLMQRNK 380 390 400 410 420 430 >>CCDS58323.1 DAAM1 gene_id:23002|Hs108|chr14 (1068 aa) initn: 116 init1: 78 opt: 292 Z-score: 369.7 bits: 77.9 E(32554): 2.9e-14 Smith-Waterman score: 292; 30.0% identity (65.3% similar) in 190 aa overlap (53-234:137-321) 30 40 50 60 70 80 pF1KE6 SDPTEANLESADPELCIRLLQMPSVVNYSGLRKRLEGSDGGWMVQFLEQSGLDLLLEALA :. :. . ....:.. .::. .:. : CCDS58 IDQLNSMAARKSLLALEKEEEEERSKTIESLKTALRTKPMRFVTRFIDLDGLSCILNFLK 110 120 130 140 150 160 90 100 110 120 130 140 pF1KE6 RLSGRGVARISDALLQLTCVSCVRAVMNSRQGIEYILSNQGYVRQLSQALDTSNVMVKKQ .. . :.. .. . ..:..:.::. :: ..:... . ..:.:.: :. .: CCDS58 TMD----YETSESRIHTSLIGCIKALMNNSQGRAHVLAHSESINVIAQSLSTENIKTKVA 170 180 190 200 210 220 150 160 170 180 190 pF1KE6 VFELLAALCIYSPEGHVLTLDALDHYKTVCSQQYRFSIVMNELSGS-----DNVPYVVTL :.:.:.:.:. : :: .:.:. ::. :.. ::. ..:.:. : :.: ... CCDS58 VLEILGAVCLV-PGGHKKVLQAMLHYQKYASERTRFQTLINDLDKSTGRYRDEVSLKTAI 230 240 250 260 270 280 200 210 220 230 pF1KE6 LSVINAVI---LGPEDLRARTQLRNEFIGLQLLDVLARLR .: ::::. : :.: : .:: ::. : . :. .:: CCDS58 MSFINAVLSQGAGVESLDFRLHLRYEFLMLGIQPVIDKLREHENSTLDRHLDFFEMLRNE 290 300 310 320 330 340 CCDS58 DELEFAKRFELVHIDTKSATQMFELTRKRLTHSEAYPHFMSILHHCLQMPYKRSGNTVQY 350 360 370 380 390 400 >>CCDS9737.1 DAAM1 gene_id:23002|Hs108|chr14 (1078 aa) initn: 116 init1: 78 opt: 292 Z-score: 369.6 bits: 77.9 E(32554): 2.9e-14 Smith-Waterman score: 292; 30.0% identity (65.3% similar) in 190 aa overlap (53-234:137-321) 30 40 50 60 70 80 pF1KE6 SDPTEANLESADPELCIRLLQMPSVVNYSGLRKRLEGSDGGWMVQFLEQSGLDLLLEALA :. :. . ....:.. .::. .:. : CCDS97 IDQLNSMAARKSLLALEKEEEEERSKTIESLKTALRTKPMRFVTRFIDLDGLSCILNFLK 110 120 130 140 150 160 90 100 110 120 130 140 pF1KE6 RLSGRGVARISDALLQLTCVSCVRAVMNSRQGIEYILSNQGYVRQLSQALDTSNVMVKKQ .. . :.. .. . ..:..:.::. :: ..:... . ..:.:.: :. .: CCDS97 TMD----YETSESRIHTSLIGCIKALMNNSQGRAHVLAHSESINVIAQSLSTENIKTKVA 170 180 190 200 210 220 150 160 170 180 190 pF1KE6 VFELLAALCIYSPEGHVLTLDALDHYKTVCSQQYRFSIVMNELSGS-----DNVPYVVTL :.:.:.:.:. : :: .:.:. ::. :.. ::. ..:.:. : :.: ... CCDS97 VLEILGAVCLV-PGGHKKVLQAMLHYQKYASERTRFQTLINDLDKSTGRYRDEVSLKTAI 230 240 250 260 270 280 200 210 220 230 pF1KE6 LSVINAVI---LGPEDLRARTQLRNEFIGLQLLDVLARLR .: ::::. : :.: : .:: ::. : . :. .:: CCDS97 MSFINAVLSQGAGVESLDFRLHLRYEFLMLGIQPVIDKLREHENSTLDRHLDFFEMLRNE 290 300 310 320 330 340 CCDS97 DELEFAKRFELVHIDTKSATQMFELTRKRLTHSEAYPHFMSILHHCLQMPYKRSGNTVQY 350 360 370 380 390 400 >>CCDS41780.1 FMNL3 gene_id:91010|Hs108|chr12 (976 aa) initn: 235 init1: 161 opt: 291 Z-score: 369.1 bits: 77.7 E(32554): 3.1e-14 Smith-Waterman score: 320; 28.0% identity (59.2% similar) in 250 aa overlap (8-234:61-309) 10 20 30 pF1KE6 MSVKEGAQRKWAALKEKLGPQDSDPTEANLESA---- ..:: . .. : ..: .. ... CCDS41 PCELEERFALVLSSMNLPPDKARLLRQYDNEKKWDLICDQERFQVKNPPHTYIQKLQSFL 40 50 60 70 80 90 40 50 60 70 80 pF1KE6 DPELCIRLLQMPSVVNYSGLRK---RLEGSDGGWMVQFL--EQSGLDLLLEALA------ :: . . .. . . ::. :. . ::. .:: :..:::.:.. :. CCDS41 DPSVTRKKFRRRVQESTKVLRELEISLRTNHIGWVREFLNDENKGLDVLVDYLSFAQCSV 100 110 120 130 140 150 90 100 110 120 130 pF1KE6 ---RLSGRGVARISDALLQL----TCVSCVRAVMNSRQGIEYILSNQGYVRQLSQALDTS : :: . . : . : .:. :.::.:: . :.. ..:. : ... .:... CCDS41 MYSTLPGRRALKNSRLVSQKDDVHVCILCLRAIMNYQYGFNLVMSHPHAVNEIALSLNNK 160 170 180 190 200 210 140 150 160 170 180 190 pF1KE6 NVMVKKQVFELLAALCIYSPEGHVLTLDALDHYKTVCSQQYRFSIVMNELSGSD-NVPYV : .: :.:::::.:. :: . : :.:..: ::.. .:: .:. . . : :. .. CCDS41 NPRTKALVLELLAAVCLVRG-GHEIILAAFDNFKEVCKELHRFEKLMEYFRNEDSNIDFM 220 230 240 250 260 200 210 220 230 pF1KE6 VTLLSVINAVILGPEDLRARTQLRNEFIGLQLLDVLARLR :. .. :: :. . ::. :..:. :: : : . : . : CCDS41 VACMQFINIVVHSVEDMNFRVHLQYEFTKLGLEEFLQKSRHTESEKLQVQIQAYLDNVFD 270 280 290 300 310 320 CCDS41 VGGLLEDAETKNVALEKVEELEEHVSHLTEKLLDLENENMMRVAELEKQLLQREKELESI 330 340 350 360 370 380 >>CCDS44874.1 FMNL3 gene_id:91010|Hs108|chr12 (1027 aa) initn: 235 init1: 161 opt: 285 Z-score: 361.0 bits: 76.2 E(32554): 8.7e-14 Smith-Waterman score: 285; 34.1% identity (67.4% similar) in 135 aa overlap (101-234:227-360) 80 90 100 110 120 130 pF1KE6 QSGLDLLLEALARLSGRGVARISDALLQLTCVSCVRAVMNSRQGIEYILSNQGYVRQLSQ :. :.::.:: . :.. ..:. : ... CCDS44 RQSVLRYSTLPGRRALKNSRLVSQKDDVHVCILCLRAIMNYQYGFNLVMSHPHAVNEIAL 200 210 220 230 240 250 140 150 160 170 180 pF1KE6 ALDTSNVMVKKQVFELLAALCIYSPEGHVLTLDALDHYKTVCSQQYRFSIVMNELSGSD- .:...: .: :.:::::.:. :: . : :.:..: ::.. .:: .:. . . : CCDS44 SLNNKNPRTKALVLELLAAVCLVRG-GHEIILAAFDNFKEVCKELHRFEKLMEYFRNEDS 260 270 280 290 300 310 190 200 210 220 230 pF1KE6 NVPYVVTLLSVINAVILGPEDLRARTQLRNEFIGLQLLDVLARLR :. ..:. .. :: :. . ::. :..:. :: : : . : . : CCDS44 NIDFMVACMQFINIVVHSVEDMNFRVHLQYEFTKLGLEEFLQKSRHTESEKLQVQIQAYL 320 330 340 350 360 370 CCDS44 DNVFDVGGLLEDAETKNVALEKVEELEEHVSHLTEKLLDLENENMMRVAELEKQLLQREK 380 390 400 410 420 430 >>CCDS11497.1 FMNL1 gene_id:752|Hs108|chr17 (1100 aa) initn: 250 init1: 189 opt: 285 Z-score: 360.5 bits: 76.3 E(32554): 9.3e-14 Smith-Waterman score: 285; 34.8% identity (68.1% similar) in 135 aa overlap (101-234:230-363) 80 90 100 110 120 130 pF1KE6 QSGLDLLLEALARLSGRGVARISDALLQLTCVSCVRAVMNSRQGIEYILSNQGYVRQLSQ :. :.::.:: ..:. .... . : ... CCDS11 RHLTIKLTPAHSRKALRNSRIVSQKDDVHVCIMCLRAIMNYQSGFSLVMNHPACVNEIAL 200 210 220 230 240 250 140 150 160 170 180 pF1KE6 ALDTSNVMVKKQVFELLAALCIYSPEGHVLTLDALDHYKTVCSQQYRFSIVMNELSGSD- .:...: .: :.:::::.:. :: . : :.:..: ::..:.:: .:. . . : CCDS11 SLNNKNPRTKALVLELLAAVCLVRG-GHDIILAAFDNFKEVCGEQHRFEKLMEYFRNEDS 260 270 280 290 300 310 190 200 210 220 230 pF1KE6 NVPYVVTLLSVINAVILGPEDLRARTQLRNEFIGLQLLDVLARLR :. ..:. .. :: :. . :.. :. :. :: : : : ::: CCDS11 NIDFMVACMQFINIVVHSVENMNFRVFLQYEFTHLGLDLYLERLRLTESDKLQVQIQAYL 320 330 340 350 360 370 CCDS11 DNIFDVGALLEDTETKNAVLEHMEELQEQVALLTERLRDAENESMAKIAELEKQLSQARK 380 390 400 410 420 430 >>CCDS54999.1 DAAM2 gene_id:23500|Hs108|chr6 (1067 aa) initn: 184 init1: 86 opt: 282 Z-score: 356.8 bits: 75.5 E(32554): 1.5e-13 Smith-Waterman score: 282; 30.0% identity (62.6% similar) in 190 aa overlap (53-234:133-317) 30 40 50 60 70 80 pF1KE6 SDPTEANLESADPELCIRLLQMPSVVNYSGLRKRLEGSDGGWMVQFLEQSGLDLLLEALA :. :. . ....:.: :: ::. : CCDS54 IDRINSMAAMQSLYAFDEEETEMRNQVVEDLKTALRTQPMRFVTRFIELEGLTCLLNFLR 110 120 130 140 150 160 90 100 110 120 130 140 pF1KE6 RLSGRGVARISDALLQLTCVSCVRAVMNSRQGIEYILSNQGYVRQLSQALDTSNVMVKKQ .. .. .. . ..:..:.::. :: ..:.. . ..:.: : : .: CCDS54 SMDHA----TCESRIHTSLIGCIKALMNNSQGRAHVLAQPEAISTIAQSLRTENSKTKVA 170 180 190 200 210 150 160 170 180 190 pF1KE6 VFELLAALCIYSPEGHVLTLDALDHYKTVCSQQYRFSIVMNELSGS-----DNVPYVVTL :.:.:.:.:. : :: .:.:. ::.. ... ::. ..:::. : :.: ... CCDS54 VLEILGAVCLV-PGGHKKVLQAMLHYQVYAAERTRFQTLLNELDRSLGRYRDEVNLKTAI 220 230 240 250 260 270 200 210 220 230 pF1KE6 LSVINAVI---LGPEDLRARTQLRNEFIGLQLLDVLARLR .: ::::. : ..:. : .:: ::. : . :. .:: CCDS54 MSFINAVLNAGAGEDNLEFRLHLRYEFLMLGIQPVIDKLRQHENAILDKHLDFFEMVRNE 280 290 300 310 320 330 CCDS54 DDLELARRFDMVHIDTKSASQMFELIHKKLKYTEAYPCLLSVLHHCLQMPYKRNGGYFQQ 340 350 360 370 380 390 234 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:07:28 2016 done: Tue Nov 8 15:07:28 2016 Total Scan time: 1.280 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]