FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1631, 147 aa 1>>>pF1KE1631 147 - 147 aa - 147 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0495+/-0.000589; mu= 12.8587+/- 0.035 mean_var=59.8947+/-11.881, 0's: 0 Z-trim(111.7): 15 B-trim: 81 in 1/51 Lambda= 0.165722 statistics sampled from 12589 (12604) to 12589 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.777), E-opt: 0.2 (0.387), width: 16 Scan time: 1.630 The best scores are: opt bits E(32554) CCDS9554.1 ANG gene_id:283|Hs108|chr14 ( 147) 1030 253.8 2.9e-68 CCDS9555.1 RNASE4 gene_id:6038|Hs108|chr14 ( 147) 343 89.5 8e-19 CCDS9559.1 RNASE1 gene_id:6035|Hs108|chr14 ( 156) 311 81.9 1.7e-16 >>CCDS9554.1 ANG gene_id:283|Hs108|chr14 (147 aa) initn: 1030 init1: 1030 opt: 1030 Z-score: 1339.1 bits: 253.8 E(32554): 2.9e-68 Smith-Waterman score: 1030; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:1-147) 10 20 30 40 50 60 pF1KE1 MVMGLGVLLLVFVLGLGLTPPTLAQDNSRYTHFLTQHYDAKPQGRDDRYCESIMRRRGLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 MVMGLGVLLLVFVLGLGLTPPTLAQDNSRYTHFLTQHYDAKPQGRDDRYCESIMRRRGLT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SPCKDINTFIHGNKRSIKAICENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 SPCKDINTFIHGNKRSIKAICENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRA 70 80 90 100 110 120 130 140 pF1KE1 TAGFRNVVVACENGLPVHLDQSIFRRP ::::::::::::::::::::::::::: CCDS95 TAGFRNVVVACENGLPVHLDQSIFRRP 130 140 >>CCDS9555.1 RNASE4 gene_id:6038|Hs108|chr14 (147 aa) initn: 270 init1: 250 opt: 343 Z-score: 451.4 bits: 89.5 E(32554): 8e-19 Smith-Waterman score: 343; 41.7% identity (67.6% similar) in 139 aa overlap (5-140:9-146) 10 20 30 40 50 pF1KE1 MVMGLGVLLLVFVLGLGLTPPTLAQDNSRYTHFLTQHYDAKPQGRDDRYCESIMRR : .:::. .:::::. :. .::. : .:: :: . : .::::. .:.: CCDS95 MALQRTHSLLLLLLLTLLGLGLVQPSYGQDGM-YQRFLRQHVHPEETGGSDRYCNLMMQR 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 RGLT-SPCKDINTFIHGNKRSIKAICENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPP : .: :: .::::: . .:..:: . : . . .. .. .:: :. :.: : CCDS95 RKMTLYHCKRFNTFIHEDIWNIRSICSTTNIQCKNGKMNCHEGVVKVTDCRDTGSSRAPN 60 70 80 90 100 110 120 130 140 pF1KE1 CQYRATAGFRNVVVACENG--LPVHLDQSIFRRP :.::: :. : ::.:::.. .:::.: CCDS95 CRYRAIASTRRVVIACEGNPQVPVHFDG 120 130 140 >>CCDS9559.1 RNASE1 gene_id:6035|Hs108|chr14 (156 aa) initn: 259 init1: 131 opt: 311 Z-score: 409.7 bits: 81.9 E(32554): 1.7e-16 Smith-Waterman score: 311; 36.3% identity (69.2% similar) in 146 aa overlap (7-143:11-152) 10 20 30 40 50 pF1KE1 MVMGLGVLLLVFVLGLGLTPPTLAQDNSRYTHFLTQHYDAKPQ-GRDDRYCESIMR .::....: :: . :.:... :: .: ::.:. . . .. ::...:: CCDS95 MALEKSLVRLLLLVLILLVLGWVQPSLGKE-SRAKKFQRQHMDSDSSPSSSSTYCNQMMR 10 20 30 40 50 60 70 80 90 100 pF1KE1 RRGLTSP-CKDINTFIHGNKRSIKAICEN-----KNGNPHRENLRISKSSFQVTTCKLHG ::..:. :: .:::.: ... .: . :::. : :.::...: :.: . CCDS95 RRNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQG---NCYKSNSSMHITDCRLTN 60 70 80 90 100 110 110 120 130 140 pF1KE1 GSPWPPCQYRATAGFRNVVVACENG--LPVHLDQSIFRRP :: .: : ::.. :...::::.. .:::.: :. CCDS95 GSRYPNCAYRTSPKERHIIVACEGSPYVPVHFDASVEDST 120 130 140 150 147 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:51:04 2016 done: Sun Nov 6 09:51:04 2016 Total Scan time: 1.630 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]