FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1781, 289 aa 1>>>pF1KE1781 289 - 289 aa - 289 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1153+/-0.000362; mu= 16.5302+/- 0.022 mean_var=64.3681+/-13.507, 0's: 0 Z-trim(113.6): 2 B-trim: 1227 in 1/54 Lambda= 0.159860 statistics sampled from 23062 (23064) to 23062 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.27), width: 16 Scan time: 6.950 The best scores are: opt bits E(85289) NP_000261 (OMIM: 164050,613179) purine nucleoside ( 289) 1953 459.0 4.8e-129 NP_002442 (OMIM: 156540) S-methyl-5'-thioadenosine ( 283) 274 71.8 1.7e-12 >>NP_000261 (OMIM: 164050,613179) purine nucleoside phos (289 aa) initn: 1953 init1: 1953 opt: 1953 Z-score: 2437.7 bits: 459.0 E(85289): 4.8e-129 Smith-Waterman score: 1953; 100.0% identity (100.0% similar) in 289 aa overlap (1-289:1-289) 10 20 30 40 50 60 pF1KE1 MENGYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLGGLTDKLTQAQIFDYGEIPNFPRST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MENGYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLGGLTDKLTQAQIFDYGEIPNFPRST 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VPGHAGRLVFGFLNGRACVMMQGRFHMYEGYPLWKVTFPVRVFHLLGVDTLVVTNAAGGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 VPGHAGRLVFGFLNGRACVMMQGRFHMYEGYPLWKVTFPVRVFHLLGVDTLVVTNAAGGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 NPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 NPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 MGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSL 190 200 210 220 230 240 250 260 270 280 pF1KE1 ITNKVIMDYESLEKANHEEVLAAGKQAAQKLEQFVSILMASIPLPDKAS ::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 ITNKVIMDYESLEKANHEEVLAAGKQAAQKLEQFVSILMASIPLPDKAS 250 260 270 280 >>NP_002442 (OMIM: 156540) S-methyl-5'-thioadenosine pho (283 aa) initn: 181 init1: 137 opt: 274 Z-score: 345.1 bits: 71.8 E(85289): 1.7e-12 Smith-Waterman score: 274; 27.5% identity (58.8% similar) in 262 aa overlap (26-283:11-256) 10 20 30 40 50 60 pF1KE1 MENGYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLGGLTDKLTQAQIFDYGEIPNFPRST ...:: :.:: .. ... : . : : . NP_002 MASGTTTTAVKIGIIGGTGLD--DPEILEGRTEKYVDTP-FGK-- 10 20 30 40 70 80 90 100 110 pF1KE1 VPGHAGRLVFGFLNGRACVMM--QGRFHMYEGYPLWKVTFPVRVFHLL--GVDTLVVTNA :. : :..: ... ::.. .:: : .: ::.. . .. : : ..::.: NP_002 -PSDA--LILGKIKNVDCVLLARHGRQHTI--MPS-KVNYQANIWALKEEGCTHVIVTTA 50 60 70 80 90 120 130 140 150 160 170 pF1KE1 AGGLNPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALS :.: ... :::..: . :. . :. : .. : :.. . :. . NP_002 CGSLREEIQPGDIVIIDQFIDRTTMRPQSFYDGSHSCARGVCHIPMAEPFCPKTREVLIE 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 TWKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVF : :..: : ..::.: . :: : . :: ... :::...:.:::::..:.. :. NP_002 TAKKLG-LRCHSKGTMVTIEGPRFSSRAESFMFRTWGADVINMTTVPEVVLAKEAGICYA 160 170 180 190 200 210 240 250 260 270 280 pF1KE1 GFSLITNKVIMDYESLEKANHEEVLAAGKQAAQKLEQFVSILMASIPLPDKAS .... :. : : .. ..:: . :. :.: . :.:...:: NP_002 SIAMATDYDCWK-EHEEAVSVDRVLKTLKENANKAK---SLLLTTIPQIGSTEWSETLHN 220 230 240 250 260 NP_002 LKNMAQFSVLLPRH 270 280 289 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:51:45 2016 done: Sun Nov 6 09:51:46 2016 Total Scan time: 6.950 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]