Result of FASTA (omim) for pFN21AB3007
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3007, 1249 aa
  1>>>pF1KB3007 1249 - 1249 aa - 1249 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4292+/-0.000409; mu= 22.5451+/- 0.026
 mean_var=76.8004+/-15.413, 0's: 0 Z-trim(111.2): 19  B-trim: 14 in 2/55
 Lambda= 0.146350
 statistics sampled from 19750 (19762) to 19750 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.598), E-opt: 0.2 (0.232), width:  16
 Scan time:  9.980

The best scores are:                                      opt bits E(85289)
NP_003282 (OMIM: 190470) tripeptidyl-peptidase 2 i (1249) 8400 1784.1       0
XP_005254128 (OMIM: 190470) PREDICTED: tripeptidyl (1291) 7432 1579.8       0
NP_001317517 (OMIM: 190470) tripeptidyl-peptidase  (1262) 6621 1408.5       0
XP_005254127 (OMIM: 190470) PREDICTED: tripeptidyl (1304) 6620 1408.3       0


>>NP_003282 (OMIM: 190470) tripeptidyl-peptidase 2 isofo  (1249 aa)
 initn: 8400 init1: 8400 opt: 8400  Z-score: 9576.6  bits: 1784.1 E(85289):    0
Smith-Waterman score: 8400; 100.0% identity (100.0% similar) in 1249 aa overlap (1-1249:1-1249)

               10        20        30        40        50        60
pF1KB3 MATAATEEPFPFHGLLPKKETGAASFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MATAATEEPFPFHGLLPKKETGAASFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 KPKIVDIIDTTGSGDVNTATEVEPKDGEIVGLSGRVLKIPASWTNPSGKYHIGIKNGYDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KPKIVDIIDTTGSGDVNTATEVEPKDGEIVGLSGRVLKIPASWTNPSGKYHIGIKNGYDF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 YPKALKERIQKERKEKIWDPVHRVALAEACRKQEEFDVANNGSSQANKLIKEELQSQVEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YPKALKERIQKERKEKIWDPVHRVALAEACRKQEEFDVANNGSSQANKLIKEELQSQVEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 LNSFEKKYSDPGPVYDCLVWHDGEVWRACIDSNEDGDLSKSTVLRNYKEAQEYGSFGTAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LNSFEKKYSDPGPVYDCLVWHDGEVWRACIDSNEDGDLSKSTVLRNYKEAQEYGSFGTAE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 MLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 LSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVINEAVWKHNIIYVSSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVINEAVWKHNIIYVSSA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 GNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGAL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 GVSISAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALILSGLKANNIDYTVHSVRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GVSISAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALILSGLKANNIDYTVHSVRR
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB3 ALENTAVKADNIEVFAQGHGIIQVDKAYDYLVQNTSFANKLGFTVTVGNNRGIYLRDPVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ALENTAVKADNIEVFAQGHGIIQVDKAYDYLVQNTSFANKLGFTVTVGNNRGIYLRDPVQ
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB3 VAAPSDHGVGIEPVFPENTENSEKISLQLHLALTSNSSWVQCPSHLELMNQCRHINIRVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VAAPSDHGVGIEPVFPENTENSEKISLQLHLALTSNSSWVQCPSHLELMNQCRHINIRVD
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB3 PRGLREGLHYTEVCGYDIASPNAGPLFRVPITAVIAAKVNESSHYDLAFTDVHFKPGQIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PRGLREGLHYTEVCGYDIASPNAGPLFRVPITAVIAAKVNESSHYDLAFTDVHFKPGQIR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB3 RHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRAYRSHEFYKFCSLPEKGTLTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 RHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRAYRSHEFYKFCSLPEKGTLTE
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB3 AFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 AFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLK
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB3 YEDLAPCITLKNWVQTLRPVSAKTKPLGSRDVLPNNRQLYEMVLTYNFHQPKSGEVTPSC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 YEDLAPCITLKNWVQTLRPVSAKTKPLGSRDVLPNNRQLYEMVLTYNFHQPKSGEVTPSC
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB3 PLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDL
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KB3 ERLKDLPFIVSHRLSNTLSLDIHENHSFALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ERLKDLPFIVSHRLSNTLSLDIHENHSFALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIP
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KB3 KGAGPGCYLAGSLTLSKTELGKKADVIPVHYYLIPPPTKTKNGSKDKEKDSEKEKDLKEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KGAGPGCYLAGSLTLSKTELGKKADVIPVHYYLIPPPTKTKNGSKDKEKDSEKEKDLKEE
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KB3 FTEALRDLKIQWMTKLDSSDIYNELKETYPNYLPLYVARLHQLDAEKERMKRLNEIVDAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FTEALRDLKIQWMTKLDSSDIYNELKETYPNYLPLYVARLHQLDAEKERMKRLNEIVDAA
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KB3 NAVISHIDQTALAVYIAMKTDPRPDAATIKNDMDKQKSTLVDALCRKGCALADHLLHTQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 NAVISHIDQTALAVYIAMKTDPRPDAATIKNDMDKQKSTLVDALCRKGCALADHLLHTQA
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KB3 QDGAISTDAEGKEEEGESPLDSLAETFWETTKWTDLFDNKVLTFAYKHALVNKMYGRGLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 QDGAISTDAEGKEEEGESPLDSLAETFWETTKWTDLFDNKVLTFAYKHALVNKMYGRGLK
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240         
pF1KB3 FATKLVEEKPTKENWKNCIQLMKLLGWTHCASFTENWLPIMYPPDYCVF
       :::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FATKLVEEKPTKENWKNCIQLMKLLGWTHCASFTENWLPIMYPPDYCVF
             1210      1220      1230      1240         

>>XP_005254128 (OMIM: 190470) PREDICTED: tripeptidyl-pep  (1291 aa)
 initn: 8380 init1: 7432 opt: 7432  Z-score: 8471.8  bits: 1579.8 E(85289):    0
Smith-Waterman score: 8218; 96.6% identity (96.7% similar) in 1281 aa overlap (1-1239:1-1281)

               10        20        30        40        50        60
pF1KB3 MATAATEEPFPFHGLLPKKETGAASFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MATAATEEPFPFHGLLPKKETGAASFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 KPKIVDIIDTTGSGDVNTATEVEPKDGEIVGLSGRVLKIPASWTNPSGKYHIGIKNGYDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KPKIVDIIDTTGSGDVNTATEVEPKDGEIVGLSGRVLKIPASWTNPSGKYHIGIKNGYDF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 YPKALKERIQKERKEKIWDPVHRVALAEACRKQEEFDVANNGSSQANKLIKEELQSQVEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YPKALKERIQKERKEKIWDPVHRVALAEACRKQEEFDVANNGSSQANKLIKEELQSQVEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 LNSFEKKYSDPGPVYDCLVWHDGEVWRACIDSNEDGDLSKSTVLRNYKEAQEYGSFGTAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNSFEKKYSDPGPVYDCLVWHDGEVWRACIDSNEDGDLSKSTVLRNYKEAQEYGSFGTAE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 MLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 LSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVINEAVWKHNIIYVSSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVINEAVWKHNIIYVSSA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 GNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGAL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 GVSISAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALILSGLKANNIDYTVHSVRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVSISAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALILSGLKANNIDYTVHSVRR
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB3 ALENTAVKADNIEVFAQGHGIIQVDKAYDYLVQNTSFANKLGFTVTVGNNRGIYLRDPVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALENTAVKADNIEVFAQGHGIIQVDKAYDYLVQNTSFANKLGFTVTVGNNRGIYLRDPVQ
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB3 VAAPSDHGVGIEPVFPENTENSEKISLQLHLALTSNSSWVQCPSHLELMNQCRHINIRVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VAAPSDHGVGIEPVFPENTENSEKISLQLHLALTSNSSWVQCPSHLELMNQCRHINIRVD
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB3 PRGLREGLHYTEVCGYDIASPNAGPLFRVPITAVIAAKVNESSHYDLAFTDVHFKPGQIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PRGLREGLHYTEVCGYDIASPNAGPLFRVPITAVIAAKVNESSHYDLAFTDVHFKPGQIR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB3 RHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRAYRSHEFYKFCSLPEKGTLTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRAYRSHEFYKFCSLPEKGTLTE
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB3 AFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLK
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB3 YEDLAPCITLKNWVQTLRPVSAKTKPLGSRDVLPNNRQLYEMVLTYNFHQPKSGEVTPSC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YEDLAPCITLKNWVQTLRPVSAKTKPLGSRDVLPNNRQLYEMVLTYNFHQPKSGEVTPSC
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB3 PLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDL
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KB3 ERLKDLPFIVSHRLSNTLSLDIHENHSFALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERLKDLPFIVSHRLSNTLSLDIHENHSFALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIP
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KB3 KGAGPGCYLAGSLTLSKTELGKKADVIPVHYYLIPPPTKTKNGSKDKEKDSEKEKDLKEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGAGPGCYLAGSLTLSKTELGKKADVIPVHYYLIPPPTKTKNGSKDKEKDSEKEKDLKEE
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KB3 FTEALRDLKIQWMTKLDSSDIYNELKETYPNYLPLYVARLHQLDAEKERMKRLNEIVDAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FTEALRDLKIQWMTKLDSSDIYNELKETYPNYLPLYVARLHQLDAEKERMKRLNEIVDAA
             1030      1040      1050      1060      1070      1080

             1090      1100      1110                              
pF1KB3 NAVISHIDQTALAVYIAMKTDPRPDAATIK------------------------------
       ::::::::::::::::::::::::::::::                              
XP_005 NAVISHIDQTALAVYIAMKTDPRPDAATIKKLPSDFCIIPALLWAARIHQAAFAESALQT
             1090      1100      1110      1120      1130      1140

                         1120      1130      1140      1150        
pF1KB3 ------------NDMDKQKSTLVDALCRKGCALADHLLHTQAQDGAISTDAEGKEEEGES
                   .:::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAERRMKGVLRHSDMDKQKSTLVDALCRKGCALADHLLHTQAQDGAISTDAEGKEEEGES
             1150      1160      1170      1180      1190      1200

     1160      1170      1180      1190      1200      1210        
pF1KB3 PLDSLAETFWETTKWTDLFDNKVLTFAYKHALVNKMYGRGLKFATKLVEEKPTKENWKNC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLDSLAETFWETTKWTDLFDNKVLTFAYKHALVNKMYGRGLKFATKLVEEKPTKENWKNC
             1210      1220      1230      1240      1250      1260

     1220      1230      1240         
pF1KB3 IQLMKLLGWTHCASFTENWLPIMYPPDYCVF
       :::::::::::::::::::::          
XP_005 IQLMKLLGWTHCASFTENWLPIMYPPDYCVF
             1270      1280      1290 

>>NP_001317517 (OMIM: 190470) tripeptidyl-peptidase 2 is  (1262 aa)
 initn: 6616 init1: 6616 opt: 6621  Z-score: 7546.6  bits: 1408.5 E(85289):    0
Smith-Waterman score: 8364; 99.0% identity (99.0% similar) in 1262 aa overlap (1-1249:1-1262)

               10        20        30        40        50        60
pF1KB3 MATAATEEPFPFHGLLPKKETGAASFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MATAATEEPFPFHGLLPKKETGAASFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 KPKIVDIIDTTGSGDVNTATEVEPKDGEIVGLSGRVLKIPASWTNPSGKYHIGIKNGYDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KPKIVDIIDTTGSGDVNTATEVEPKDGEIVGLSGRVLKIPASWTNPSGKYHIGIKNGYDF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 YPKALKERIQKERKEKIWDPVHRVALAEACRKQEEFDVANNGSSQANKLIKEELQSQVEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YPKALKERIQKERKEKIWDPVHRVALAEACRKQEEFDVANNGSSQANKLIKEELQSQVEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 LNSFEKKYSDPGPVYDCLVWHDGEVWRACIDSNEDGDLSKSTVLRNYKEAQEYGSFGTAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LNSFEKKYSDPGPVYDCLVWHDGEVWRACIDSNEDGDLSKSTVLRNYKEAQEYGSFGTAE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 MLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 LSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVINEAVWKHNIIYVSSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVINEAVWKHNIIYVSSA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 GNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGAL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 GVSISAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALILSGLKANNIDYTVHSVRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVSISAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALILSGLKANNIDYTVHSVRR
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB3 ALENTAVKADNIEVFAQGHGIIQVDKAYDYLVQNTSFANKLGFTVTVGNNRGIYLRDPVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALENTAVKADNIEVFAQGHGIIQVDKAYDYLVQNTSFANKLGFTVTVGNNRGIYLRDPVQ
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB3 VAAPSDHGVGIEPVFPENTENSEKISLQLHLALTSNSSWVQCPSHLELMNQCRHINIRVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAAPSDHGVGIEPVFPENTENSEKISLQLHLALTSNSSWVQCPSHLELMNQCRHINIRVD
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB3 PRGLREGLHYTEVCGYDIASPNAGPLFRVPITAVIAAKVNESSHYDLAFTDVHFKPGQIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRGLREGLHYTEVCGYDIASPNAGPLFRVPITAVIAAKVNESSHYDLAFTDVHFKPGQIR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB3 RHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRAYRSHEFYKFCSLPEKGTLTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRAYRSHEFYKFCSLPEKGTLTE
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB3 AFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLK
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB3 YEDLAPCITLKNWVQTLRPVSAKTKPLGSRDVLPNNRQLYEMVLTYNFHQPKSGEVTPSC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YEDLAPCITLKNWVQTLRPVSAKTKPLGSRDVLPNNRQLYEMVLTYNFHQPKSGEVTPSC
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB3 PLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDL
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KB3 ERLKDLPFIVSHRLSNTLSLDIHENHSFALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERLKDLPFIVSHRLSNTLSLDIHENHSFALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIP
              910       920       930       940       950       960

              970       980                    990      1000       
pF1KB3 KGAGPGCYLAGSLTLSKTELGKKA-------------DVIPVHYYLIPPPTKTKNGSKDK
       ::::::::::::::::::::::::             :::::::::::::::::::::::
NP_001 KGAGPGCYLAGSLTLSKTELGKKAGQSAAKRQGKFKKDVIPVHYYLIPPPTKTKNGSKDK
              970       980       990      1000      1010      1020

      1010      1020      1030      1040      1050      1060       
pF1KB3 EKDSEKEKDLKEEFTEALRDLKIQWMTKLDSSDIYNELKETYPNYLPLYVARLHQLDAEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKDSEKEKDLKEEFTEALRDLKIQWMTKLDSSDIYNELKETYPNYLPLYVARLHQLDAEK
             1030      1040      1050      1060      1070      1080

      1070      1080      1090      1100      1110      1120       
pF1KB3 ERMKRLNEIVDAANAVISHIDQTALAVYIAMKTDPRPDAATIKNDMDKQKSTLVDALCRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERMKRLNEIVDAANAVISHIDQTALAVYIAMKTDPRPDAATIKNDMDKQKSTLVDALCRK
             1090      1100      1110      1120      1130      1140

      1130      1140      1150      1160      1170      1180       
pF1KB3 GCALADHLLHTQAQDGAISTDAEGKEEEGESPLDSLAETFWETTKWTDLFDNKVLTFAYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GCALADHLLHTQAQDGAISTDAEGKEEEGESPLDSLAETFWETTKWTDLFDNKVLTFAYK
             1150      1160      1170      1180      1190      1200

      1190      1200      1210      1220      1230      1240       
pF1KB3 HALVNKMYGRGLKFATKLVEEKPTKENWKNCIQLMKLLGWTHCASFTENWLPIMYPPDYC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HALVNKMYGRGLKFATKLVEEKPTKENWKNCIQLMKLLGWTHCASFTENWLPIMYPPDYC
             1210      1220      1230      1240      1250      1260

         
pF1KB3 VF
       ::
NP_001 VF
         

>>XP_005254127 (OMIM: 190470) PREDICTED: tripeptidyl-pep  (1304 aa)
 initn: 7564 init1: 6616 opt: 6620  Z-score: 7545.2  bits: 1408.3 E(85289):    0
Smith-Waterman score: 8073; 95.6% identity (95.7% similar) in 1281 aa overlap (1-1226:1-1281)

               10        20        30        40        50        60
pF1KB3 MATAATEEPFPFHGLLPKKETGAASFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MATAATEEPFPFHGLLPKKETGAASFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 KPKIVDIIDTTGSGDVNTATEVEPKDGEIVGLSGRVLKIPASWTNPSGKYHIGIKNGYDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KPKIVDIIDTTGSGDVNTATEVEPKDGEIVGLSGRVLKIPASWTNPSGKYHIGIKNGYDF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 YPKALKERIQKERKEKIWDPVHRVALAEACRKQEEFDVANNGSSQANKLIKEELQSQVEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YPKALKERIQKERKEKIWDPVHRVALAEACRKQEEFDVANNGSSQANKLIKEELQSQVEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 LNSFEKKYSDPGPVYDCLVWHDGEVWRACIDSNEDGDLSKSTVLRNYKEAQEYGSFGTAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNSFEKKYSDPGPVYDCLVWHDGEVWRACIDSNEDGDLSKSTVLRNYKEAQEYGSFGTAE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 MLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEPERNGVAPGAQILSIKIGDTR
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 LSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVINEAVWKHNIIYVSSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVINEAVWKHNIIYVSSA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 GNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGAL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 GVSISAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALILSGLKANNIDYTVHSVRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVSISAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALILSGLKANNIDYTVHSVRR
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB3 ALENTAVKADNIEVFAQGHGIIQVDKAYDYLVQNTSFANKLGFTVTVGNNRGIYLRDPVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALENTAVKADNIEVFAQGHGIIQVDKAYDYLVQNTSFANKLGFTVTVGNNRGIYLRDPVQ
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB3 VAAPSDHGVGIEPVFPENTENSEKISLQLHLALTSNSSWVQCPSHLELMNQCRHINIRVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VAAPSDHGVGIEPVFPENTENSEKISLQLHLALTSNSSWVQCPSHLELMNQCRHINIRVD
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB3 PRGLREGLHYTEVCGYDIASPNAGPLFRVPITAVIAAKVNESSHYDLAFTDVHFKPGQIR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PRGLREGLHYTEVCGYDIASPNAGPLFRVPITAVIAAKVNESSHYDLAFTDVHFKPGQIR
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB3 RHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRAYRSHEFYKFCSLPEKGTLTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RHFIEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRAYRSHEFYKFCSLPEKGTLTE
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB3 AFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGINRFDVQSSLK
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KB3 YEDLAPCITLKNWVQTLRPVSAKTKPLGSRDVLPNNRQLYEMVLTYNFHQPKSGEVTPSC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YEDLAPCITLKNWVQTLRPVSAKTKPLGSRDVLPNNRQLYEMVLTYNFHQPKSGEVTPSC
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KB3 PLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDL
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KB3 ERLKDLPFIVSHRLSNTLSLDIHENHSFALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERLKDLPFIVSHRLSNTLSLDIHENHSFALLGKKKSSNLTLPPKYNQPFFVTSLPDDKIP
              910       920       930       940       950       960

              970       980                    990      1000       
pF1KB3 KGAGPGCYLAGSLTLSKTELGKKA-------------DVIPVHYYLIPPPTKTKNGSKDK
       ::::::::::::::::::::::::             :::::::::::::::::::::::
XP_005 KGAGPGCYLAGSLTLSKTELGKKAGQSAAKRQGKFKKDVIPVHYYLIPPPTKTKNGSKDK
              970       980       990      1000      1010      1020

      1010      1020      1030      1040      1050      1060       
pF1KB3 EKDSEKEKDLKEEFTEALRDLKIQWMTKLDSSDIYNELKETYPNYLPLYVARLHQLDAEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EKDSEKEKDLKEEFTEALRDLKIQWMTKLDSSDIYNELKETYPNYLPLYVARLHQLDAEK
             1030      1040      1050      1060      1070      1080

      1070      1080      1090      1100      1110                 
pF1KB3 ERMKRLNEIVDAANAVISHIDQTALAVYIAMKTDPRPDAATIK-----------------
       :::::::::::::::::::::::::::::::::::::::::::                 
XP_005 ERMKRLNEIVDAANAVISHIDQTALAVYIAMKTDPRPDAATIKKLPSDFCIIPALLWAAR
             1090      1100      1110      1120      1130      1140

                                      1120      1130      1140     
pF1KB3 -------------------------NDMDKQKSTLVDALCRKGCALADHLLHTQAQDGAI
                                .::::::::::::::::::::::::::::::::::
XP_005 IHQAAFAESALQTLAERRMKGVLRHSDMDKQKSTLVDALCRKGCALADHLLHTQAQDGAI
             1150      1160      1170      1180      1190      1200

        1150      1160      1170      1180      1190      1200     
pF1KB3 STDAEGKEEEGESPLDSLAETFWETTKWTDLFDNKVLTFAYKHALVNKMYGRGLKFATKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 STDAEGKEEEGESPLDSLAETFWETTKWTDLFDNKVLTFAYKHALVNKMYGRGLKFATKL
             1210      1220      1230      1240      1250      1260

        1210      1220      1230      1240         
pF1KB3 VEEKPTKENWKNCIQLMKLLGWTHCASFTENWLPIMYPPDYCVF
       :::::::::::::::::::::                       
XP_005 VEEKPTKENWKNCIQLMKLLGWTHCASFTENWLPIMYPPDYCVF
             1270      1280      1290      1300    




1249 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 07:00:25 2016 done: Tue Nov  8 07:00:27 2016
 Total Scan time:  9.980 Total Display time:  0.110

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com