FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5132, 110 aa 1>>>pF1KE5132 110 - 110 aa - 110 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6134+/-0.000553; mu= 10.4675+/- 0.034 mean_var=86.6022+/-17.154, 0's: 0 Z-trim(116.0): 4 B-trim: 291 in 1/50 Lambda= 0.137819 statistics sampled from 16578 (16582) to 16578 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.841), E-opt: 0.2 (0.509), width: 16 Scan time: 1.830 The best scores are: opt bits E(32554) CCDS8884.1 DCD gene_id:117159|Hs108|chr12 ( 110) 717 150.6 1.8e-37 CCDS73478.1 DCD gene_id:117159|Hs108|chr12 ( 121) 637 134.7 1.2e-32 >>CCDS8884.1 DCD gene_id:117159|Hs108|chr12 (110 aa) initn: 717 init1: 717 opt: 717 Z-score: 786.1 bits: 150.6 E(32554): 1.8e-37 Smith-Waterman score: 717; 100.0% identity (100.0% similar) in 110 aa overlap (1-110:1-110) 10 20 30 40 50 60 pF1KE5 MRFMTLLFLTALAGALVCAYDPEAASAPGSGNPCHEASAAQKENAGEDPGLARQAPKPRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS88 MRFMTLLFLTALAGALVCAYDPEAASAPGSGNPCHEASAAQKENAGEDPGLARQAPKPRK 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 QRSSLLEKGLDGAKKAVGGLGKLGKDAVEDLESVGKGAVHDVKDVLDSVL :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS88 QRSSLLEKGLDGAKKAVGGLGKLGKDAVEDLESVGKGAVHDVKDVLDSVL 70 80 90 100 110 >>CCDS73478.1 DCD gene_id:117159|Hs108|chr12 (121 aa) initn: 637 init1: 637 opt: 637 Z-score: 699.6 bits: 134.7 E(32554): 1.2e-32 Smith-Waterman score: 637; 100.0% identity (100.0% similar) in 97 aa overlap (1-97:1-97) 10 20 30 40 50 60 pF1KE5 MRFMTLLFLTALAGALVCAYDPEAASAPGSGNPCHEASAAQKENAGEDPGLARQAPKPRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 MRFMTLLFLTALAGALVCAYDPEAASAPGSGNPCHEASAAQKENAGEDPGLARQAPKPRK 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 QRSSLLEKGLDGAKKAVGGLGKLGKDAVEDLESVGKGAVHDVKDVLDSVL ::::::::::::::::::::::::::::::::::::: CCDS73 QRSSLLEKGLDGAKKAVGGLGKLGKDAVEDLESVGKGGEERLVFGAPVNLTSIPLTSVSR 70 80 90 100 110 120 CCDS73 P 110 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 21:40:57 2016 done: Mon Nov 7 21:40:57 2016 Total Scan time: 1.830 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]