FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2425, 329 aa 1>>>pF1KE2425 329 - 329 aa - 329 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.5167+/-0.000664; mu= 20.8223+/- 0.040 mean_var=65.9267+/-13.499, 0's: 0 Z-trim(110.3): 12 B-trim: 65 in 1/50 Lambda= 0.157959 statistics sampled from 11539 (11542) to 11539 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.717), E-opt: 0.2 (0.355), width: 16 Scan time: 2.060 The best scores are: opt bits E(32554) CCDS8151.1 RCE1 gene_id:9986|Hs108|chr11 ( 329) 2269 525.4 2.4e-149 >>CCDS8151.1 RCE1 gene_id:9986|Hs108|chr11 (329 aa) initn: 2269 init1: 2269 opt: 2269 Z-score: 2794.7 bits: 525.4 E(32554): 2.4e-149 Smith-Waterman score: 2269; 100.0% identity (100.0% similar) in 329 aa overlap (1-329:1-329) 10 20 30 40 50 60 pF1KE2 MAALGGDGLRLLSVSRPERPPESAALGGLGPGLCCWVSVFSCLSLACSYVGSLYVWKSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MAALGGDGLRLLSVSRPERPPESAALGGLGPGLCCWVSVFSCLSLACSYVGSLYVWKSEL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 PRDHPAVIKRRFTSVLVVSSLSPLCVLLWRELTGIQPGTSLLTLMGFRLEGIFPAALLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 PRDHPAVIKRRFTSVLVVSSLSPLCVLLWRELTGIQPGTSLLTLMGFRLEGIFPAALLPL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 LLTMILFLGPLMQLSMDCPCDLADGLKVVLAPRSWARCLTDMRWLRNQVIAPLTEELVFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 LLTMILFLGPLMQLSMDCPCDLADGLKVVLAPRSWARCLTDMRWLRNQVIAPLTEELVFR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 ACMLPMLAPCMGLGPAVFTCPLFFGVAHFHHIIEQLRFRQSSVGNIFLSAAFQFSYTAVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 ACMLPMLAPCMGLGPAVFTCPLFFGVAHFHHIIEQLRFRQSSVGNIFLSAAFQFSYTAVF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 GAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEHPQRRPLLAGYALGVGLFLLLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 GAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEHPQRRPLLAGYALGVGLFLLLLQ 250 260 270 280 290 300 310 320 pF1KE2 PLTDPKLYGSLPLCVLLERAGDSEAPLCS ::::::::::::::::::::::::::::: CCDS81 PLTDPKLYGSLPLCVLLERAGDSEAPLCS 310 320 329 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 19:53:07 2016 done: Mon Nov 7 19:53:07 2016 Total Scan time: 2.060 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]