FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4318, 324 aa 1>>>pF1KE4318 324 - 324 aa - 324 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4026+/-0.000299; mu= 11.6389+/- 0.019 mean_var=97.8238+/-19.672, 0's: 0 Z-trim(118.3): 20 B-trim: 0 in 0/54 Lambda= 0.129674 statistics sampled from 31005 (31025) to 31005 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.737), E-opt: 0.2 (0.364), width: 16 Scan time: 8.630 The best scores are: opt bits E(85289) NP_872577 (OMIM: 203300,604982) Hermansky-Pudlak s ( 324) 2129 408.2 1.2e-113 NP_000186 (OMIM: 203300,604982) Hermansky-Pudlak s ( 700) 2058 395.1 2.3e-109 XP_005269814 (OMIM: 203300,604982) PREDICTED: Herm ( 700) 2058 395.1 2.3e-109 NP_001309405 (OMIM: 203300,604982) Hermansky-Pudla ( 700) 2058 395.1 2.3e-109 NP_001309406 (OMIM: 203300,604982) Hermansky-Pudla ( 700) 2058 395.1 2.3e-109 NP_001309420 (OMIM: 203300,604982) Hermansky-Pudla ( 291) 1667 321.7 1.2e-87 NP_001309407 (OMIM: 203300,604982) Hermansky-Pudla ( 667) 1665 321.5 3e-87 NP_001309408 (OMIM: 203300,604982) Hermansky-Pudla ( 667) 1665 321.5 3e-87 NP_001309412 (OMIM: 203300,604982) Hermansky-Pudla ( 577) 1209 236.2 1.3e-61 NP_001309413 (OMIM: 203300,604982) Hermansky-Pudla ( 577) 1209 236.2 1.3e-61 NP_001309421 (OMIM: 203300,604982) Hermansky-Pudla ( 275) 1121 219.5 6.2e-57 XP_016871662 (OMIM: 203300,604982) PREDICTED: Herm ( 275) 1121 219.5 6.2e-57 NP_001309419 (OMIM: 203300,604982) Hermansky-Pudla ( 308) 1110 217.5 2.8e-56 NP_001309414 (OMIM: 203300,604982) Hermansky-Pudla ( 544) 816 162.7 1.6e-39 XP_016871660 (OMIM: 203300,604982) PREDICTED: Herm ( 544) 816 162.7 1.6e-39 NP_001309409 (OMIM: 203300,604982) Hermansky-Pudla ( 613) 606 123.4 1.2e-27 NP_001309410 (OMIM: 203300,604982) Hermansky-Pudla ( 613) 606 123.4 1.2e-27 XP_016871659 (OMIM: 203300,604982) PREDICTED: Herm ( 580) 528 108.8 2.9e-23 NP_001309411 (OMIM: 203300,604982) Hermansky-Pudla ( 580) 528 108.8 2.9e-23 >>NP_872577 (OMIM: 203300,604982) Hermansky-Pudlak syndr (324 aa) initn: 2129 init1: 2129 opt: 2129 Z-score: 2161.2 bits: 408.2 E(85289): 1.2e-113 Smith-Waterman score: 2129; 99.7% identity (99.7% similar) in 324 aa overlap (1-324:1-324) 10 20 30 40 50 60 pF1KE4 MKGVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_872 MKCVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_872 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_872 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_872 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTGGSSAETETDSFSLPEEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_872 VQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTGGSSAETETDSFSLPEEY 250 260 270 280 290 300 310 320 pF1KE4 FTPAPSPGDQSSGEDRRKAGGNNS :::::::::::::::::::::::: NP_872 FTPAPSPGDQSSGEDRRKAGGNNS 310 320 >>NP_000186 (OMIM: 203300,604982) Hermansky-Pudlak syndr (700 aa) initn: 2058 init1: 2058 opt: 2058 Z-score: 2084.5 bits: 395.1 E(85289): 2.3e-109 Smith-Waterman score: 2058; 97.8% identity (97.8% similar) in 321 aa overlap (1-321:1-321) 10 20 30 40 50 60 pF1KE4 MKGVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MKCVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTGGSSAETETDSFSLPEEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 VQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTGGSSAETETDSFSLPEEY 250 260 270 280 290 300 310 320 pF1KE4 FTPAPSPGDQSSGEDRRKAGGNNS ::::::::::::: :: NP_000 FTPAPSPGDQSSGSTIWLEGGTPPMDALQIAEDTLQTLVPHCPVPSGPRRIFLDANVKES 310 320 330 340 350 360 >>XP_005269814 (OMIM: 203300,604982) PREDICTED: Hermansk (700 aa) initn: 2058 init1: 2058 opt: 2058 Z-score: 2084.5 bits: 395.1 E(85289): 2.3e-109 Smith-Waterman score: 2058; 97.8% identity (97.8% similar) in 321 aa overlap (1-321:1-321) 10 20 30 40 50 60 pF1KE4 MKGVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MKCVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTGGSSAETETDSFSLPEEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTGGSSAETETDSFSLPEEY 250 260 270 280 290 300 310 320 pF1KE4 FTPAPSPGDQSSGEDRRKAGGNNS ::::::::::::: :: XP_005 FTPAPSPGDQSSGSTIWLEGGTPPMDALQIAEDTLQTLVPHCPVPSGPRRIFLDANVKES 310 320 330 340 350 360 >>NP_001309405 (OMIM: 203300,604982) Hermansky-Pudlak sy (700 aa) initn: 2058 init1: 2058 opt: 2058 Z-score: 2084.5 bits: 395.1 E(85289): 2.3e-109 Smith-Waterman score: 2058; 97.8% identity (97.8% similar) in 321 aa overlap (1-321:1-321) 10 20 30 40 50 60 pF1KE4 MKGVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKCVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTGGSSAETETDSFSLPEEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTGGSSAETETDSFSLPEEY 250 260 270 280 290 300 310 320 pF1KE4 FTPAPSPGDQSSGEDRRKAGGNNS ::::::::::::: :: NP_001 FTPAPSPGDQSSGSTIWLEGGTPPMDALQIAEDTLQTLVPHCPVPSGPRRIFLDANVKES 310 320 330 340 350 360 >>NP_001309406 (OMIM: 203300,604982) Hermansky-Pudlak sy (700 aa) initn: 2058 init1: 2058 opt: 2058 Z-score: 2084.5 bits: 395.1 E(85289): 2.3e-109 Smith-Waterman score: 2058; 97.8% identity (97.8% similar) in 321 aa overlap (1-321:1-321) 10 20 30 40 50 60 pF1KE4 MKGVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKCVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTGGSSAETETDSFSLPEEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTGGSSAETETDSFSLPEEY 250 260 270 280 290 300 310 320 pF1KE4 FTPAPSPGDQSSGEDRRKAGGNNS ::::::::::::: :: NP_001 FTPAPSPGDQSSGSTIWLEGGTPPMDALQIAEDTLQTLVPHCPVPSGPRRIFLDANVKES 310 320 330 340 350 360 >>NP_001309420 (OMIM: 203300,604982) Hermansky-Pudlak sy (291 aa) initn: 1685 init1: 1661 opt: 1667 Z-score: 1694.8 bits: 321.7 E(85289): 1.2e-87 Smith-Waterman score: 1824; 89.5% identity (89.5% similar) in 324 aa overlap (1-324:1-291) 10 20 30 40 50 60 pF1KE4 MKGVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKCVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTGGSSAETETDSFSLPEEY :::::::::::::::: ::::::::::: NP_001 VQDLYPSESTAEDDIQ---------------------------------ETDSFSLPEEY 250 260 310 320 pF1KE4 FTPAPSPGDQSSGEDRRKAGGNNS :::::::::::::::::::::::: NP_001 FTPAPSPGDQSSGEDRRKAGGNNS 270 280 290 >>NP_001309407 (OMIM: 203300,604982) Hermansky-Pudlak sy (667 aa) initn: 1662 init1: 1662 opt: 1665 Z-score: 1687.4 bits: 321.5 E(85289): 3e-87 Smith-Waterman score: 1753; 87.5% identity (87.5% similar) in 321 aa overlap (1-321:1-288) 10 20 30 40 50 60 pF1KE4 MKGVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKCVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTGGSSAETETDSFSLPEEY :::::::::::::::: ::::::::::: NP_001 VQDLYPSESTAEDDIQ---------------------------------ETDSFSLPEEY 250 260 310 320 pF1KE4 FTPAPSPGDQSSGEDRRKAGGNNS ::::::::::::: :: NP_001 FTPAPSPGDQSSGSTIWLEGGTPPMDALQIAEDTLQTLVPHCPVPSGPRRIFLDANVKES 270 280 290 300 310 320 >>NP_001309408 (OMIM: 203300,604982) Hermansky-Pudlak sy (667 aa) initn: 1662 init1: 1662 opt: 1665 Z-score: 1687.4 bits: 321.5 E(85289): 3e-87 Smith-Waterman score: 1753; 87.5% identity (87.5% similar) in 321 aa overlap (1-321:1-288) 10 20 30 40 50 60 pF1KE4 MKGVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKCVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MLEKLSDTYTCFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSSHSASSLRPADLLALILL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTGGSSAETETDSFSLPEEY :::::::::::::::: ::::::::::: NP_001 VQDLYPSESTAEDDIQ---------------------------------ETDSFSLPEEY 250 260 310 320 pF1KE4 FTPAPSPGDQSSGEDRRKAGGNNS ::::::::::::: :: NP_001 FTPAPSPGDQSSGSTIWLEGGTPPMDALQIAEDTLQTLVPHCPVPSGPRRIFLDANVKES 270 280 290 300 310 320 >>NP_001309412 (OMIM: 203300,604982) Hermansky-Pudlak sy (577 aa) initn: 1209 init1: 1209 opt: 1209 Z-score: 1227.3 bits: 236.2 E(85289): 1.3e-61 Smith-Waterman score: 1209; 96.8% identity (96.8% similar) in 188 aa overlap (134-321:11-198) 110 120 130 140 150 160 pF1KE4 DLRRKLYVLKYLFEVHFGLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQE :::::::::::::::::::::::::::::: NP_001 MATSCMSFTWLRPPDLAQRVQLWEHFQSLLWTYSRLREQE 10 20 30 40 170 180 190 200 210 220 pF1KE4 QCFAVEALERLIHPQLCELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QCFAVEALERLIHPQLCELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSS 50 60 70 80 90 100 230 240 250 260 270 280 pF1KE4 HSASSLRPADLLALILLVQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HSASSLRPADLLALILLVQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTG 110 120 130 140 150 160 290 300 310 320 pF1KE4 GSSAETETDSFSLPEEYFTPAPSPGDQSSGEDRRKAGGNNS :::::::::::::::::::::::::::::: :: NP_001 GSSAETETDSFSLPEEYFTPAPSPGDQSSGSTIWLEGGTPPMDALQIAEDTLQTLVPHCP 170 180 190 200 210 220 NP_001 VPSGPRRIFLDANVKESYCPLVPHTMYCLPLWQGINLVLLTRSPSAPLALVLSQLMDGFS 230 240 250 260 270 280 >>NP_001309413 (OMIM: 203300,604982) Hermansky-Pudlak sy (577 aa) initn: 1209 init1: 1209 opt: 1209 Z-score: 1227.3 bits: 236.2 E(85289): 1.3e-61 Smith-Waterman score: 1209; 96.8% identity (96.8% similar) in 188 aa overlap (134-321:11-198) 110 120 130 140 150 160 pF1KE4 DLRRKLYVLKYLFEVHFGLVTVDGHLIRKELRPPDLAQRVQLWEHFQSLLWTYSRLREQE :::::::::::::::::::::::::::::: NP_001 MATSCMSFTWLRPPDLAQRVQLWEHFQSLLWTYSRLREQE 10 20 30 40 170 180 190 200 210 220 pF1KE4 QCFAVEALERLIHPQLCELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QCFAVEALERLIHPQLCELCIEALERHVIQAVNTSPERGGEEALHAFLLVHSKLLAFYSS 50 60 70 80 90 100 230 240 250 260 270 280 pF1KE4 HSASSLRPADLLALILLVQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HSASSLRPADLLALILLVQDLYPSESTAEDDIQPSPRRARSSQNIPVQQAWSPHSTGPTG 110 120 130 140 150 160 290 300 310 320 pF1KE4 GSSAETETDSFSLPEEYFTPAPSPGDQSSGEDRRKAGGNNS :::::::::::::::::::::::::::::: :: NP_001 GSSAETETDSFSLPEEYFTPAPSPGDQSSGSTIWLEGGTPPMDALQIAEDTLQTLVPHCP 170 180 190 200 210 220 NP_001 VPSGPRRIFLDANVKESYCPLVPHTMYCLPLWQGINLVLLTRSPSAPLALVLSQLMDGFS 230 240 250 260 270 280 324 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:12:26 2016 done: Sat Nov 5 23:12:27 2016 Total Scan time: 8.630 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]