FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6680, 338 aa 1>>>pF1KE6680 338 - 338 aa - 338 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4321+/-0.000858; mu= 14.8004+/- 0.052 mean_var=58.0519+/-11.902, 0's: 0 Z-trim(103.9): 23 B-trim: 417 in 1/52 Lambda= 0.168332 statistics sampled from 7642 (7649) to 7642 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.235), width: 16 Scan time: 2.250 The best scores are: opt bits E(32554) CCDS6712.1 FBP1 gene_id:2203|Hs108|chr9 ( 338) 2214 546.1 1.5e-155 CCDS6711.1 FBP2 gene_id:8789|Hs108|chr9 ( 339) 1738 430.5 9.4e-121 >>CCDS6712.1 FBP1 gene_id:2203|Hs108|chr9 (338 aa) initn: 2214 init1: 2214 opt: 2214 Z-score: 2906.2 bits: 546.1 E(32554): 1.5e-155 Smith-Waterman score: 2214; 100.0% identity (100.0% similar) in 338 aa overlap (1-338:1-338) 10 20 30 40 50 60 pF1KE6 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK 250 260 270 280 290 300 310 320 330 pF1KE6 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ :::::::::::::::::::::::::::::::::::::: CCDS67 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ 310 320 330 >>CCDS6711.1 FBP2 gene_id:8789|Hs108|chr9 (339 aa) initn: 1744 init1: 1721 opt: 1738 Z-score: 2281.4 bits: 430.5 E(32554): 9.4e-121 Smith-Waterman score: 1738; 76.9% identity (92.9% similar) in 337 aa overlap (1-337:1-337) 10 20 30 40 50 60 pF1KE6 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI :.:..::.::. ::::.:::.::.:.:::::::::::. ::.:::::::::::.:::::: CCDS67 MTDRSPFETDMLTLTRYVMEKGRQAKGTGELTQLLNSMLTAIKAISSAVRKAGLAHLYGI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP :::.:::::.:::::::::.::.::..::..::::::::.: :::. :::::::::::: CCDS67 AGSVNVTGDEVKKLDVLSNSLVINMVQSSYSTCVLVSEENKDAIITAKEKRGKYVVCFDP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC ::::::::::.:.::::.:::: : :::::::::: :::.::::::::::::...:. CCDS67 LDGSSNIDCLASIGTIFAIYRKTSEDEPSEKDALQCGRNIVAAGYALYGSATLVALSTGQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAP ::. ::::::.:::.::.:::::::::::::::::::. :: :.:::.:.:::: :.::: CCDS67 GVDLFMLDPALGEFVLVEKDVKIKKKGKIYSLNEGYAKYFDAATTEYVQKKKFPEDGSAP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK ::::::::::::::::::::::::::::.:::.:::::::::::.::..:.:::.:::: CCDS67 YGARYVGSMVADVHRTLVYGGIFLYPANQKSPKGKLRLLYECNPVAYIIEQAGGLATTGT 250 260 270 280 290 300 310 320 330 pF1KE6 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ . :::: : ::::.:.:::::.:: :.: .:..: CCDS67 QPVLDVKPEAIHQRVPLILGSPEDVQEYLTCVQKNQAGS 310 320 330 338 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:21:34 2016 done: Tue Nov 8 15:21:34 2016 Total Scan time: 2.250 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]