FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4360, 379 aa 1>>>pF1KE4360 379 - 379 aa - 379 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3349+/-0.000319; mu= 18.1987+/- 0.020 mean_var=92.0702+/-18.617, 0's: 0 Z-trim(118.3): 10 B-trim: 45 in 1/51 Lambda= 0.133664 statistics sampled from 31042 (31051) to 31042 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.723), E-opt: 0.2 (0.364), width: 16 Scan time: 8.370 The best scores are: opt bits E(85289) NP_000146 (OMIM: 230400,606999) galactose-1-phosph ( 379) 2663 523.3 3.6e-148 NP_001245261 (OMIM: 230400,606999) galactose-1-pho ( 270) 1763 349.6 4.9e-96 >>NP_000146 (OMIM: 230400,606999) galactose-1-phosphate (379 aa) initn: 2663 init1: 2663 opt: 2663 Z-score: 2781.2 bits: 523.3 E(85289): 3.6e-148 Smith-Waterman score: 2663; 99.7% identity (100.0% similar) in 379 aa overlap (1-379:1-379) 10 20 30 40 50 60 pF1KE4 MSRSGTDPQQRQQASEADAAAATFRANDHQHIRYNPLQDEWVLVSAHRMKRPWQGQVEPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MSRSGTDPQQRQQASEADAAAATFRANDHQHIRYNPLQDEWVLVSAHRMKRPWQGQVEPQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 LLKTVPRHDPLNPLCPGAIRANGEVNPQYDSTFLFDNDFPALQPDAPSPGPSDHPLFQAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 LLKTVPRHDPLNPLCPGAIRANGEVNPQYDSTFLFDNDFPALQPDAPSPGPSDHPLFQAK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 SARGVCKVMCFHPWSDVTLPLMSVPEIRAVVDAWASVTEELGAQYPWVQIFENKGAMMGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 SARGVCKVMCFHPWSDVTLPLMSVPEIRAVVDAWASVTEELGAQYPWVQIFENKGAMMGC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 SNPHPHCQVWASSFLPDIAQREERSQQAYKSQHGEPLLMEYSRQELLRKERLVLTSEHWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 SNPHPHCQVWASSFLPDIAQREERSQQAYKSQHGEPLLMEYSRQELLRKERLVLTSEHWL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 VLVPFWATWPYQTLLLPRRHVRRLPELTPAERDDLASIMKKLLTKYDNLFETSFPYSMGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 VLVPFWATWPYQTLLLPRRHVRRLPELTPAERDDLASIMKKLLTKYDNLFETSFPYSMGW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 HGAPTGSEAGANWDHWQLHAHYYPPLLRSATVRKFMVGYEMLAQAQRDLTPEQAAERLRA :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: NP_000 HGAPTGSEAGANWNHWQLHAHYYPPLLRSATVRKFMVGYEMLAQAQRDLTPEQAAERLRA 310 320 330 340 350 360 370 pF1KE4 LPEVHYHLGQKDRETATIA ::::::::::::::::::: NP_000 LPEVHYHLGQKDRETATIA 370 >>NP_001245261 (OMIM: 230400,606999) galactose-1-phospha (270 aa) initn: 1763 init1: 1763 opt: 1763 Z-score: 1845.1 bits: 349.6 E(85289): 4.9e-96 Smith-Waterman score: 1763; 99.6% identity (100.0% similar) in 253 aa overlap (127-379:18-270) 100 110 120 130 140 150 pF1KE4 NDFPALQPDAPSPGPSDHPLFQAKSARGVCKVMCFHPWSDVTLPLMSVPEIRAVVDAWAS :::::::::::::::::::::::::::::: NP_001 MTLSTLCVLGPSEPTESKVMCFHPWSDVTLPLMSVPEIRAVVDAWAS 10 20 30 40 160 170 180 190 200 210 pF1KE4 VTEELGAQYPWVQIFENKGAMMGCSNPHPHCQVWASSFLPDIAQREERSQQAYKSQHGEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VTEELGAQYPWVQIFENKGAMMGCSNPHPHCQVWASSFLPDIAQREERSQQAYKSQHGEP 50 60 70 80 90 100 220 230 240 250 260 270 pF1KE4 LLMEYSRQELLRKERLVLTSEHWLVLVPFWATWPYQTLLLPRRHVRRLPELTPAERDDLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LLMEYSRQELLRKERLVLTSEHWLVLVPFWATWPYQTLLLPRRHVRRLPELTPAERDDLA 110 120 130 140 150 160 280 290 300 310 320 330 pF1KE4 SIMKKLLTKYDNLFETSFPYSMGWHGAPTGSEAGANWDHWQLHAHYYPPLLRSATVRKFM :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: NP_001 SIMKKLLTKYDNLFETSFPYSMGWHGAPTGSEAGANWNHWQLHAHYYPPLLRSATVRKFM 170 180 190 200 210 220 340 350 360 370 pF1KE4 VGYEMLAQAQRDLTPEQAAERLRALPEVHYHLGQKDRETATIA ::::::::::::::::::::::::::::::::::::::::::: NP_001 VGYEMLAQAQRDLTPEQAAERLRALPEVHYHLGQKDRETATIA 230 240 250 260 270 379 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:07:45 2016 done: Sat Nov 5 23:07:46 2016 Total Scan time: 8.370 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]