FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1838, 354 aa 1>>>pF1KE1838 354 - 354 aa - 354 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5892+/-0.000861; mu= 14.2050+/- 0.052 mean_var=59.5316+/-11.852, 0's: 0 Z-trim(105.3): 16 B-trim: 0 in 0/49 Lambda= 0.166227 statistics sampled from 8339 (8348) to 8339 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.639), E-opt: 0.2 (0.256), width: 16 Scan time: 2.720 The best scores are: opt bits E(32554) CCDS5640.1 PON2 gene_id:5445|Hs108|chr7 ( 354) 2334 568.2 3.7e-162 CCDS5638.1 PON1 gene_id:5444|Hs108|chr7 ( 355) 1634 400.3 1.3e-111 CCDS5639.1 PON3 gene_id:5446|Hs108|chr7 ( 354) 1608 394.1 9.6e-110 CCDS47644.1 PON2 gene_id:5445|Hs108|chr7 ( 342) 1455 357.4 1e-98 >>CCDS5640.1 PON2 gene_id:5445|Hs108|chr7 (354 aa) initn: 2334 init1: 2334 opt: 2334 Z-score: 3024.7 bits: 568.2 E(32554): 3.7e-162 Smith-Waterman score: 2334; 100.0% identity (100.0% similar) in 354 aa overlap (1-354:1-354) 10 20 30 40 50 60 pF1KE1 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 DNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 DNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS 250 260 270 280 290 300 310 320 330 340 350 pF1KE1 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL 310 320 330 340 350 >>CCDS5638.1 PON1 gene_id:5444|Hs108|chr7 (355 aa) initn: 1642 init1: 1258 opt: 1634 Z-score: 2117.4 bits: 400.3 E(32554): 1.3e-111 Smith-Waterman score: 1634; 65.9% identity (89.3% similar) in 355 aa overlap (1-354:1-355) 10 20 30 40 50 60 pF1KE1 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN :..:.:. :::..:::. .. . ..::.: :::. :.::.:.:.::::.::::..:::: CCDS56 MAKLIALTLLGMGLALFRNHQSSYQTRLNALREVQPVELPNCNLVKGIETGSEDLEILPN 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRG-FDLASFNPHGISTF ::::.: :::.::..:: :..:: ::.:::.:: : . :: :. . ::..:::::::::: CCDS56 GLAFISSGLKYPGIKSFNPNSPGKILLMDLNEEDPTVLELGITGSKFDVSSFNPHGISTF 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 IDNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYA :.:...::.:::::. :.:::.:::.: :.:::::::..:.:::..:::.:::: :::. CCDS56 TDEDNAMYLLVVNHPDAKSTVELFKFQEEEKSLLHLKTIRHKLLPNLNDIVAVGPEHFYG 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE1 TNDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADI :::::: ::.:. : ::.: :. ::::::.::.::::::: ::::::::: ::.:.:.. CCDS56 TNDHYFLDPYLQSWEMYLGLAWSYVVYYSPSEVRVVAEGFDFANGINISPDGKYVYIAEL 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE1 LAHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPP :::.::: :::.: .:: :: :...:::::.:.:: .::.::::::::.:.: :: .::: CCDS56 LAHKIHVYEKHANWTLTPLKSLDFNTLVDNISVDPETGDLWVGCHPNGMKIFFYDSENPP 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE1 SSEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL .::::::::::.:.: :: :::.::.:::::.::::: :::::::..:.:::::: CCDS56 ASEVLRIQNILTEEPKVTQVYAENGTVLQGSTVASVYKGKLLIGTVFHKALYCEL 310 320 330 340 350 >>CCDS5639.1 PON3 gene_id:5446|Hs108|chr7 (354 aa) initn: 1608 init1: 1608 opt: 1608 Z-score: 2083.8 bits: 394.1 E(32554): 9.6e-110 Smith-Waterman score: 1608; 65.5% identity (89.8% similar) in 354 aa overlap (1-354:1-354) 10 20 30 40 50 60 pF1KE1 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN ::.:::. :::..:.:.:: .::.:.:..:::::: :. .::::. .:.:::::::::. CCDS56 MGKLVALVLLGVGLSLVGEMFLAFRERVNASREVEPVEPENCHLIEELESGSEDIDILPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI ::::.: :::.::. .::::.:: :..:::.:..:::. :.:: ::: ::::::: :: CCDS56 GLAFISSGLKYPGMPNFAPDEPGKIFLMDLNEQNPRAQALEISGGFDKELFNPHGISIFI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 DNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT :.:.::::.:::::..:.::::::::: . ::..:::.::::: :::::...:: .:::: CCDS56 DKDNTVYLYVVNHPHMKSTVEIFKFEEQQRSLVYLKTIKHELLKSVNDIVVLGPEQFYAT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL ::::.. .:...: :.:.:. :..::: ::::::.:: :::::..: :.::.::::. CCDS56 RDHYFTNSLLSFFEMILDLRWTYVLFYSPREVKVVAKGFCSANGITVSADQKYVYVADVA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS :..::..::: : .::::::..: ::::::..::..::: .::::: .::. :.:..::. CCDS56 AKNIHIMEKHDNWDLTQLKVIQLGTLVDNLTVDPATGDILAGCHPNPMKLLNYNPEDPPG 250 260 270 280 290 300 310 320 330 340 350 pF1KE1 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL ::::::::.::::: :.::::::::::::.:::::: ::.::::..:..::::: CCDS56 SEVLRIQNVLSEKPRVSTVYANNGSVLQGTSVASVYHGKILIGTVFHKTLYCEL 310 320 330 340 350 >>CCDS47644.1 PON2 gene_id:5445|Hs108|chr7 (342 aa) initn: 2267 init1: 1450 opt: 1455 Z-score: 1885.7 bits: 357.4 E(32554): 1e-98 Smith-Waterman score: 2216; 96.6% identity (96.6% similar) in 354 aa overlap (1-354:1-342) 10 20 30 40 50 60 pF1KE1 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 DNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT :: :::::::::::::::::::::::::::::::::::::::::::::: CCDS47 DN------------EFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT 130 140 150 160 190 200 210 220 230 240 pF1KE1 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE1 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS 230 240 250 260 270 280 310 320 330 340 350 pF1KE1 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL 290 300 310 320 330 340 354 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:57:26 2016 done: Sun Nov 6 09:57:27 2016 Total Scan time: 2.720 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]