FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3016, 114 aa 1>>>pF1KE3016 114 - 114 aa - 114 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4814+/-0.000281; mu= 10.1165+/- 0.018 mean_var=66.5762+/-12.930, 0's: 0 Z-trim(118.6): 15 B-trim: 0 in 0/58 Lambda= 0.157186 statistics sampled from 31636 (31651) to 31636 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.756), E-opt: 0.2 (0.371), width: 16 Scan time: 4.380 The best scores are: opt bits E(85289) NP_001035198 (OMIM: 158270) promotilin isoform 2 p ( 114) 724 171.9 1.9e-43 NP_002409 (OMIM: 158270) promotilin isoform 1 prep ( 115) 718 170.6 5e-43 NP_001171627 (OMIM: 158270) promotilin isoform 3 p ( 108) 665 158.5 2e-39 NP_001128417 (OMIM: 601665,605353) appetite-regula ( 104) 128 36.8 0.0087 XP_016862102 (OMIM: 601665,605353) PREDICTED: appe ( 116) 128 36.8 0.0096 NP_001128413 (OMIM: 601665,605353) appetite-regula ( 116) 128 36.8 0.0096 NP_001289752 (OMIM: 601665,605353) appetite-regula ( 116) 128 36.8 0.0096 >>NP_001035198 (OMIM: 158270) promotilin isoform 2 prepr (114 aa) initn: 724 init1: 724 opt: 724 Z-score: 900.8 bits: 171.9 E(85289): 1.9e-43 Smith-Waterman score: 724; 99.1% identity (100.0% similar) in 114 aa overlap (1-114:1-114) 10 20 30 40 50 60 pF1KE3 MVSRKAVAALLVVHAAAMLASQTEAFVPIFTYGELQRMQEKERNKGQKKSLSVWQRSGEE ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: NP_001 MVSRKAVAALLVVHVAAMLASQTEAFVPIFTYGELQRMQEKERNKGQKKSLSVWQRSGEE 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 GPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLSEMLPQHAK :::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLSEMLPQHAK 70 80 90 100 110 >>NP_002409 (OMIM: 158270) promotilin isoform 1 prepropr (115 aa) initn: 718 init1: 718 opt: 718 Z-score: 893.4 bits: 170.6 E(85289): 5e-43 Smith-Waterman score: 718; 99.1% identity (100.0% similar) in 113 aa overlap (1-113:1-113) 10 20 30 40 50 60 pF1KE3 MVSRKAVAALLVVHAAAMLASQTEAFVPIFTYGELQRMQEKERNKGQKKSLSVWQRSGEE ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: NP_002 MVSRKAVAALLVVHVAAMLASQTEAFVPIFTYGELQRMQEKERNKGQKKSLSVWQRSGEE 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 GPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLSEMLPQHAK ::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 GPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLSEMLPQHAAK 70 80 90 100 110 >>NP_001171627 (OMIM: 158270) promotilin isoform 3 prepr (108 aa) initn: 678 init1: 665 opt: 665 Z-score: 828.9 bits: 158.5 E(85289): 2e-39 Smith-Waterman score: 665; 98.1% identity (100.0% similar) in 106 aa overlap (1-106:1-106) 10 20 30 40 50 60 pF1KE3 MVSRKAVAALLVVHAAAMLASQTEAFVPIFTYGELQRMQEKERNKGQKKSLSVWQRSGEE ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: NP_001 MVSRKAVAALLVVHVAAMLASQTEAFVPIFTYGELQRMQEKERNKGQKKSLSVWQRSGEE 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 GPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLSEMLPQHAK :::::::::::::::::::::::::::::::::::::::::::::. NP_001 GPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLTAK 70 80 90 100 >>NP_001128417 (OMIM: 601665,605353) appetite-regulating (104 aa) initn: 83 init1: 51 opt: 128 Z-score: 171.0 bits: 36.8 E(85289): 0.0087 Smith-Waterman score: 128; 30.2% identity (64.6% similar) in 96 aa overlap (23-114:12-98) 10 20 30 40 50 pF1KE3 MVSRKAVAALLVVHAAAMLASQTEAFVPIFTYGELQRMQEKERNKG----QKKSLSVWQR : : :: :: .:.:.:: .: : ..:. : : NP_001 MFTCWWSYLRSTLAAVP----GEASRVQRKESKKPPAKLQPRALAGWLR 10 20 30 40 60 70 80 90 100 110 pF1KE3 SGEEGPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLSEMLPQHAK . : .. :: .: : ....::...:..... : ... .: .:...: ..:: NP_001 PEDGGQAEGAE----DELE-VRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEA 50 60 70 80 90 100 NP_001 PADK >>XP_016862102 (OMIM: 601665,605353) PREDICTED: appetite (116 aa) initn: 84 init1: 51 opt: 128 Z-score: 170.3 bits: 36.8 E(85289): 0.0096 Smith-Waterman score: 128; 29.2% identity (65.2% similar) in 89 aa overlap (30-114:27-110) 10 20 30 40 50 pF1KE3 MVSRKAVAALLVVHAAAMLASQTEAFVPIFTYGELQRMQEKERNKG----QKKSLSVWQR : : ::.:.:: .: : ..:. : : XP_016 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQRKESKKPPAKLQPRALAGWLR 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 SGEEGPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLSEMLPQHAK . : .. :: .: : ....::...:..... : ... .: .:...: ..:: XP_016 PEDGGQAEGAE----DELE-VRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEA 60 70 80 90 100 110 XP_016 PADK >>NP_001128413 (OMIM: 601665,605353) appetite-regulating (116 aa) initn: 84 init1: 51 opt: 128 Z-score: 170.3 bits: 36.8 E(85289): 0.0096 Smith-Waterman score: 128; 29.2% identity (65.2% similar) in 89 aa overlap (30-114:27-110) 10 20 30 40 50 pF1KE3 MVSRKAVAALLVVHAAAMLASQTEAFVPIFTYGELQRMQEKERNKG----QKKSLSVWQR : : ::.:.:: .: : ..:. : : NP_001 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQRKESKKPPAKLQPRALAGWLR 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 SGEEGPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLSEMLPQHAK . : .. :: .: : ....::...:..... : ... .: .:...: ..:: NP_001 PEDGGQAEGAE----DELE-VRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEA 60 70 80 90 100 110 NP_001 PADK >>NP_001289752 (OMIM: 601665,605353) appetite-regulating (116 aa) initn: 84 init1: 51 opt: 128 Z-score: 170.3 bits: 36.8 E(85289): 0.0096 Smith-Waterman score: 128; 29.2% identity (65.2% similar) in 89 aa overlap (30-114:27-110) 10 20 30 40 50 pF1KE3 MVSRKAVAALLVVHAAAMLASQTEAFVPIFTYGELQRMQEKERNKG----QKKSLSVWQR : : ::.:.:: .: : ..:. : : NP_001 MPSPGTVCSLLLLGMLWLDLAMAGSSFLSPEHQRVQRKESKKPPAKLQPRALAGWLR 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 SGEEGPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLSEMLPQHAK . : .. :: .: : ....::...:..... : ... .: .:...: ..:: NP_001 PEDGGQAEGAE----DELE-VRFNAPFDVGIKLSGVQYQQHSQALGKFLQDILWEEAKEA 60 70 80 90 100 110 NP_001 PADK 114 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:58:46 2016 done: Sun Nov 6 04:58:46 2016 Total Scan time: 4.380 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]