FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3016, 114 aa 1>>>pF1KE3016 114 - 114 aa - 114 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5680+/-0.000628; mu= 9.5901+/- 0.038 mean_var=66.7430+/-13.117, 0's: 0 Z-trim(111.4): 14 B-trim: 6 in 1/50 Lambda= 0.156990 statistics sampled from 12303 (12311) to 12303 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.761), E-opt: 0.2 (0.378), width: 16 Scan time: 1.670 The best scores are: opt bits E(32554) CCDS47412.1 MLN gene_id:4295|Hs108|chr6 ( 114) 724 171.7 8.5e-44 CCDS4786.1 MLN gene_id:4295|Hs108|chr6 ( 115) 718 170.4 2.2e-43 CCDS54993.1 MLN gene_id:4295|Hs108|chr6 ( 108) 665 158.4 8.5e-40 >>CCDS47412.1 MLN gene_id:4295|Hs108|chr6 (114 aa) initn: 724 init1: 724 opt: 724 Z-score: 899.8 bits: 171.7 E(32554): 8.5e-44 Smith-Waterman score: 724; 99.1% identity (100.0% similar) in 114 aa overlap (1-114:1-114) 10 20 30 40 50 60 pF1KE3 MVSRKAVAALLVVHAAAMLASQTEAFVPIFTYGELQRMQEKERNKGQKKSLSVWQRSGEE ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MVSRKAVAALLVVHVAAMLASQTEAFVPIFTYGELQRMQEKERNKGQKKSLSVWQRSGEE 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 GPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLSEMLPQHAK :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 GPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLSEMLPQHAK 70 80 90 100 110 >>CCDS4786.1 MLN gene_id:4295|Hs108|chr6 (115 aa) initn: 718 init1: 718 opt: 718 Z-score: 892.4 bits: 170.4 E(32554): 2.2e-43 Smith-Waterman score: 718; 99.1% identity (100.0% similar) in 113 aa overlap (1-113:1-113) 10 20 30 40 50 60 pF1KE3 MVSRKAVAALLVVHAAAMLASQTEAFVPIFTYGELQRMQEKERNKGQKKSLSVWQRSGEE ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MVSRKAVAALLVVHVAAMLASQTEAFVPIFTYGELQRMQEKERNKGQKKSLSVWQRSGEE 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 GPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLSEMLPQHAK ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 GPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLSEMLPQHAAK 70 80 90 100 110 >>CCDS54993.1 MLN gene_id:4295|Hs108|chr6 (108 aa) initn: 678 init1: 665 opt: 665 Z-score: 827.9 bits: 158.4 E(32554): 8.5e-40 Smith-Waterman score: 665; 98.1% identity (100.0% similar) in 106 aa overlap (1-106:1-106) 10 20 30 40 50 60 pF1KE3 MVSRKAVAALLVVHAAAMLASQTEAFVPIFTYGELQRMQEKERNKGQKKSLSVWQRSGEE ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MVSRKAVAALLVVHVAAMLASQTEAFVPIFTYGELQRMQEKERNKGQKKSLSVWQRSGEE 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 GPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLSEMLPQHAK :::::::::::::::::::::::::::::::::::::::::::::. CCDS54 GPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGLLTAK 70 80 90 100 114 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:58:45 2016 done: Sun Nov 6 04:58:45 2016 Total Scan time: 1.670 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]