FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6784, 153 aa 1>>>pF1KB6784 153 - 153 aa - 153 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0371+/-0.000346; mu= 12.6399+/- 0.021 mean_var=58.3398+/-11.743, 0's: 0 Z-trim(114.1): 30 B-trim: 22 in 1/53 Lambda= 0.167916 statistics sampled from 23728 (23746) to 23728 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.682), E-opt: 0.2 (0.278), width: 16 Scan time: 5.180 The best scores are: opt bits E(85289) NP_000580 (OMIM: 147780) interleukin-4 isoform 1 p ( 153) 1013 253.4 1.1e-67 NP_758858 (OMIM: 147780) interleukin-4 isoform 2 p ( 137) 625 159.4 1.9e-39 >>NP_000580 (OMIM: 147780) interleukin-4 isoform 1 precu (153 aa) initn: 1013 init1: 1013 opt: 1013 Z-score: 1336.5 bits: 253.4 E(85289): 1.1e-67 Smith-Waterman score: 1013; 100.0% identity (100.0% similar) in 153 aa overlap (1-153:1-153) 10 20 30 40 50 60 pF1KB6 MGLTSQLLPPLFFLLACAGNFVHGHKCDITLQEIIKTLNSLTEQKTLCTELTVTDIFAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MGLTSQLLPPLFFLLACAGNFVHGHKCDITLQEIIKTLNSLTEQKTLCTELTVTDIFAAS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 KNTTEKETFCRAATVLRQFYSHHEKDTRCLGATAQQFHRHKQLIRFLKRLDRNLWGLAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 KNTTEKETFCRAATVLRQFYSHHEKDTRCLGATAQQFHRHKQLIRFLKRLDRNLWGLAGL 70 80 90 100 110 120 130 140 150 pF1KB6 NSCPVKEANQSTLENFLERLKTIMREKYSKCSS ::::::::::::::::::::::::::::::::: NP_000 NSCPVKEANQSTLENFLERLKTIMREKYSKCSS 130 140 150 >>NP_758858 (OMIM: 147780) interleukin-4 isoform 2 precu (137 aa) initn: 625 init1: 625 opt: 625 Z-score: 829.2 bits: 159.4 E(85289): 1.9e-39 Smith-Waterman score: 875; 89.5% identity (89.5% similar) in 153 aa overlap (1-153:1-137) 10 20 30 40 50 60 pF1KB6 MGLTSQLLPPLFFLLACAGNFVHGHKCDITLQEIIKTLNSLTEQKTLCTELTVTDIFAAS ::::::::::::::::::::::::::::::::::::::::::::: NP_758 MGLTSQLLPPLFFLLACAGNFVHGHKCDITLQEIIKTLNSLTEQK--------------- 10 20 30 40 70 80 90 100 110 120 pF1KB6 KNTTEKETFCRAATVLRQFYSHHEKDTRCLGATAQQFHRHKQLIRFLKRLDRNLWGLAGL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_758 -NTTEKETFCRAATVLRQFYSHHEKDTRCLGATAQQFHRHKQLIRFLKRLDRNLWGLAGL 50 60 70 80 90 100 130 140 150 pF1KB6 NSCPVKEANQSTLENFLERLKTIMREKYSKCSS ::::::::::::::::::::::::::::::::: NP_758 NSCPVKEANQSTLENFLERLKTIMREKYSKCSS 110 120 130 153 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 22:29:47 2016 done: Sat Nov 5 22:29:48 2016 Total Scan time: 5.180 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]