FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1628, 144 aa 1>>>pF1KE1628 144 - 144 aa - 144 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0136+/-0.000522; mu= 14.1174+/- 0.032 mean_var=63.4866+/-12.383, 0's: 0 Z-trim(114.4): 2 B-trim: 0 in 0/53 Lambda= 0.160966 statistics sampled from 14959 (14961) to 14959 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.813), E-opt: 0.2 (0.46), width: 16 Scan time: 1.730 The best scores are: opt bits E(32554) CCDS4150.1 CSF2 gene_id:1437|Hs108|chr5 ( 144) 972 233.0 5.1e-62 >>CCDS4150.1 CSF2 gene_id:1437|Hs108|chr5 (144 aa) initn: 972 init1: 972 opt: 972 Z-score: 1227.0 bits: 233.0 E(32554): 5.1e-62 Smith-Waterman score: 972; 100.0% identity (100.0% similar) in 144 aa overlap (1-144:1-144) 10 20 30 40 50 60 pF1KE1 MWLQSLLLLGTVACSISAPARSPSPSTQPWEHVNAIQEARRLLNLSRDTAAEMNETVEVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MWLQSLLLLGTVACSISAPARSPSPSTQPWEHVNAIQEARRLLNLSRDTAAEMNETVEVI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SEMFDLQEPTCLQTRLELYKQGLRGSLTKLKGPLTMMASHYKQHCPPTPETSCATQIITF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 SEMFDLQEPTCLQTRLELYKQGLRGSLTKLKGPLTMMASHYKQHCPPTPETSCATQIITF 70 80 90 100 110 120 130 140 pF1KE1 ESFKENLKDFLLVIPFDCWEPVQE :::::::::::::::::::::::: CCDS41 ESFKENLKDFLLVIPFDCWEPVQE 130 140 144 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 10:00:25 2016 done: Sun Nov 6 10:00:25 2016 Total Scan time: 1.730 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]