FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3017, 116 aa 1>>>pF1KE3017 116 - 116 aa - 116 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2411+/-0.00027; mu= 11.5202+/- 0.017 mean_var=70.2246+/-13.849, 0's: 0 Z-trim(120.4): 5 B-trim: 38 in 2/54 Lambda= 0.153049 statistics sampled from 35524 (35529) to 35524 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.794), E-opt: 0.2 (0.417), width: 16 Scan time: 5.130 The best scores are: opt bits E(85289) NP_001039 (OMIM: 182450) somatostatin preproprotei ( 116) 764 176.5 8.7e-45 >>NP_001039 (OMIM: 182450) somatostatin preproprotein [H (116 aa) initn: 764 init1: 764 opt: 764 Z-score: 925.0 bits: 176.5 E(85289): 8.7e-45 Smith-Waterman score: 764; 100.0% identity (100.0% similar) in 116 aa overlap (1-116:1-116) 10 20 30 40 50 60 pF1KE3 MLSCRLQCALAALSIVLALGCVTGAPSDPRLRQFLQKSLAAAAGKQELAKYFLAELLSEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MLSCRLQCALAALSIVLALGCVTGAPSDPRLRQFLQKSLAAAAGKQELAKYFLAELLSEP 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 NQTENDALEPEDLSQAAEQDEMRLELQRSANSNPAMAPRERKAGCKNFFWKTFTSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NQTENDALEPEDLSQAAEQDEMRLELQRSANSNPAMAPRERKAGCKNFFWKTFTSC 70 80 90 100 110 116 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:13:01 2016 done: Sun Nov 6 09:13:02 2016 Total Scan time: 5.130 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]