FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5282, 252 aa 1>>>pF1KE5282 252 - 252 aa - 252 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8217+/-0.000799; mu= 12.4050+/- 0.048 mean_var=70.6871+/-14.367, 0's: 0 Z-trim(107.7): 7 B-trim: 460 in 1/51 Lambda= 0.152547 statistics sampled from 9763 (9764) to 9763 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.3), width: 16 Scan time: 2.340 The best scores are: opt bits E(32554) CCDS1885.1 PNO1 gene_id:56902|Hs108|chr2 ( 252) 1628 367.0 6.9e-102 >>CCDS1885.1 PNO1 gene_id:56902|Hs108|chr2 (252 aa) initn: 1628 init1: 1628 opt: 1628 Z-score: 1942.7 bits: 367.0 E(32554): 6.9e-102 Smith-Waterman score: 1628; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252) 10 20 30 40 50 60 pF1KE5 MESEMETQSARAEEGFTQVTRKGGRRAKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 MESEMETQSARAEEGFTQVTRKGGRRAKKRQAEQLSAAGEGGDAGRMDTEEARPAKRPVF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PPLCGDGLLSGKEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 PPLCGDGLLSGKEETRKIPVPANRYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 CKETKDVSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 CKETKDVSALTKAADFVKAFILGFQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 GRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 GRIAGKGGKTKFTIENVTRTRIVLADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGN 190 200 210 220 230 240 250 pF1KE5 IRAVASRSADRF :::::::::::: CCDS18 IRAVASRSADRF 250 252 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 23:23:42 2016 done: Mon Nov 7 23:23:42 2016 Total Scan time: 2.340 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]