FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3079, 239 aa 1>>>pF1KE3079 239 - 239 aa - 239 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2275+/-0.000704; mu= 15.8219+/- 0.043 mean_var=75.5270+/-15.261, 0's: 0 Z-trim(110.6): 21 B-trim: 0 in 0/51 Lambda= 0.147579 statistics sampled from 11704 (11725) to 11704 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.731), E-opt: 0.2 (0.36), width: 16 Scan time: 2.360 The best scores are: opt bits E(32554) CCDS374.1 AK2 gene_id:204|Hs108|chr1 ( 239) 1571 343.1 9.5e-95 CCDS81296.1 AK2 gene_id:204|Hs108|chr1 ( 232) 1527 333.7 6.1e-92 CCDS373.1 AK2 gene_id:204|Hs108|chr1 ( 232) 1514 331.0 4.2e-91 CCDS81294.1 AK2 gene_id:204|Hs108|chr1 ( 190) 1033 228.5 2.4e-60 CCDS81295.1 AK2 gene_id:204|Hs108|chr1 ( 133) 738 165.6 1.5e-41 CCDS6455.1 AK3 gene_id:50808|Hs108|chr9 ( 227) 580 132.1 3e-31 CCDS629.1 AK4 gene_id:205|Hs108|chr1 ( 223) 522 119.8 1.5e-27 CCDS56561.1 AK3 gene_id:50808|Hs108|chr9 ( 157) 386 90.7 6.1e-19 CCDS56562.1 AK3 gene_id:50808|Hs108|chr9 ( 187) 371 87.6 6.4e-18 CCDS81340.1 AK4 gene_id:205|Hs108|chr1 ( 171) 357 84.5 4.7e-17 CCDS6881.1 AK1 gene_id:203|Hs108|chr9 ( 194) 264 64.8 4.8e-11 CCDS83419.1 AK1 gene_id:203|Hs108|chr9 ( 210) 264 64.8 5.1e-11 >>CCDS374.1 AK2 gene_id:204|Hs108|chr1 (239 aa) initn: 1571 init1: 1571 opt: 1571 Z-score: 1814.5 bits: 343.1 E(32554): 9.5e-95 Smith-Waterman score: 1571; 100.0% identity (100.0% similar) in 239 aa overlap (1-239:1-239) 10 20 30 40 50 60 pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI 190 200 210 220 230 >>CCDS81296.1 AK2 gene_id:204|Hs108|chr1 (232 aa) initn: 1527 init1: 1527 opt: 1527 Z-score: 1764.1 bits: 333.7 E(32554): 6.1e-92 Smith-Waterman score: 1527; 100.0% identity (100.0% similar) in 232 aa overlap (1-232:1-232) 10 20 30 40 50 60 pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATC 190 200 210 220 230 >>CCDS373.1 AK2 gene_id:204|Hs108|chr1 (232 aa) initn: 1514 init1: 1514 opt: 1514 Z-score: 1749.1 bits: 331.0 E(32554): 4.2e-91 Smith-Waterman score: 1514; 100.0% identity (100.0% similar) in 231 aa overlap (1-231:1-231) 10 20 30 40 50 60 pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATS 190 200 210 220 230 >>CCDS81294.1 AK2 gene_id:204|Hs108|chr1 (190 aa) initn: 1031 init1: 1031 opt: 1033 Z-score: 1196.8 bits: 228.5 E(32554): 2.4e-60 Smith-Waterman score: 1145; 81.8% identity (81.8% similar) in 231 aa overlap (1-231:1-189) 10 20 30 40 50 60 pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL ::::::::::::::::::::::::::::::: CCDS81 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQ----------------------------- 10 20 30 70 80 90 100 110 120 pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE ::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 -------------VSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE 40 50 60 70 130 140 150 160 170 180 pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE 80 90 100 110 120 130 190 200 210 220 230 pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATS 140 150 160 170 180 190 >>CCDS81295.1 AK2 gene_id:204|Hs108|chr1 (133 aa) initn: 738 init1: 738 opt: 738 Z-score: 859.5 bits: 165.6 E(32554): 1.5e-41 Smith-Waterman score: 738; 96.6% identity (98.3% similar) in 116 aa overlap (1-116:1-116) 10 20 30 40 50 60 pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE :::::::::::::::::::::::::::::::::::::::::::::::::: :. .: CCDS81 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMADSPQEWPFL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE CCDS81 PRGVQPSKRAHER 130 >>CCDS6455.1 AK3 gene_id:50808|Hs108|chr9 (227 aa) initn: 613 init1: 299 opt: 580 Z-score: 674.5 bits: 132.1 E(32554): 3e-31 Smith-Waterman score: 580; 43.8% identity (74.9% similar) in 203 aa overlap (16-218:8-204) 10 20 30 40 50 60 pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL .:::..: ::.:::: . :.. .: . ::..::.:: . :.:. CCDS64 MGASARLLRAVIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGTEI 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE : :: .: :::. :.....: ..:.. : . ..::::::::. ::: :: : CCDS64 GVLAKAFIDQGKLIPDDVMTRLALHELKN-LTQYSWLLDGFPRTLPQAEALD-----RAY 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE ..:.::....: .. .:.:.: ::: ::: :. :::::: ::.::::::.: ::. CCDS64 QIDTVINLNVPFEVIKQRLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKP 110 120 130 140 150 160 190 200 210 220 230 pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI ... ::.::. :: :..:::.:.:. ......: . CCDS64 ETVIKRLKAYEDQTKPVLEYYQKKGVLETFSGTETNKIWPYVYAFLQTKVPQRSQKASVT 170 180 190 200 210 220 CCDS64 P >>CCDS629.1 AK4 gene_id:205|Hs108|chr1 (223 aa) initn: 518 init1: 251 opt: 522 Z-score: 607.9 bits: 119.8 E(32554): 1.5e-27 Smith-Waterman score: 522; 40.0% identity (69.8% similar) in 215 aa overlap (14-228:4-211) 10 20 30 40 50 60 pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL : .:::.:::::.:::: :.:.:: . ::..: .:: . ...:. CCDS62 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEV 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE :. : .. . :: :.....:. ..::. .. .::::::::. ::: :: . : CCDS62 GEMAKQYIEKSLLVPDHVITRLMMSELENRRGQH-WLLDGFPRTLGQAEALDKICE---- 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE .: :: ..:: : :.. : ::: ::: :. .::::. ::.:::::... ::. CCDS62 -VDLVISLNIPFETLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKP 110 120 130 140 150 160 190 200 210 220 230 pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI .:. ::. :. . :.:: :..::. .....: . .. . . :: CCDS62 EAVAARLRQYKDVAKPVIELYKSRGVLHQFSGTET-NKIWPYVYTLFSNKITPIQSKEAY 170 180 190 200 210 220 >>CCDS56561.1 AK3 gene_id:50808|Hs108|chr9 (157 aa) initn: 401 init1: 299 opt: 386 Z-score: 453.5 bits: 90.7 E(32554): 6.1e-19 Smith-Waterman score: 386; 46.1% identity (75.0% similar) in 128 aa overlap (91-218:12-134) 70 80 90 100 110 120 pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE : . ..::::::::. ::: :: : CCDS56 MTRLALHELKNLTQYSWLLDGFPRTLPQAEALD-----RAY 10 20 30 130 140 150 160 170 180 pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE ..:.::....: .. .:.:.: ::: ::: :. :::::: ::.::::::.: ::. CCDS56 QIDTVINLNVPFEVIKQRLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKP 40 50 60 70 80 90 190 200 210 220 230 pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI ... ::.::. :: :..:::.:.:. ......: . CCDS56 ETVIKRLKAYEDQTKPVLEYYQKKGVLETFSGTETNKIWPYVYAFLQTKVPQRSQKASVT 100 110 120 130 140 150 CCDS56 P >>CCDS56562.1 AK3 gene_id:50808|Hs108|chr9 (187 aa) initn: 499 init1: 299 opt: 371 Z-score: 435.2 bits: 87.6 E(32554): 6.4e-18 Smith-Waterman score: 410; 36.5% identity (60.1% similar) in 203 aa overlap (16-218:8-164) 10 20 30 40 50 60 pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL .:::..: ::.:::: . :.. .: . ::..::.:: . :. CCDS56 MGASARLLRAVIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGT-- 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE :::::. ::: :: : CCDS56 ---------------------------------------GFPRTLPQAEALD-----RAY 60 130 140 150 160 170 180 pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE ..:.::....: .. .:.:.: ::: ::: :. :::::: ::.::::::.: ::. CCDS56 QIDTVINLNVPFEVIKQRLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKP 70 80 90 100 110 120 190 200 210 220 230 pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI ... ::.::. :: :..:::.:.:. ......: . CCDS56 ETVIKRLKAYEDQTKPVLEYYQKKGVLETFSGTETNKIWPYVYAFLQTKVPQRSQKASVT 130 140 150 160 170 180 CCDS56 P >>CCDS81340.1 AK4 gene_id:205|Hs108|chr1 (171 aa) initn: 326 init1: 251 opt: 357 Z-score: 419.6 bits: 84.5 E(32554): 4.7e-17 Smith-Waterman score: 357; 37.8% identity (67.7% similar) in 164 aa overlap (65-228:3-159) 40 50 60 70 80 90 pF1KE3 LAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKN : .. . :: :.....:. ..::. .. CCDS81 MAKQYIEKSLLVPDHVITRLMMSELENRRGQH 10 20 30 100 110 120 130 140 150 pF1KE3 GFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHE .::::::::. ::: :: . : .: :: ..:: : :.. : ::: ::: :. CCDS81 -WLLDGFPRTLGQAEALDKICE-----VDLVISLNIPFETLKDRLSRRWIHPPSGRVYNL 40 50 60 70 80 160 170 180 190 200 210 pF1KE3 EFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQ .::::. ::.:::::... ::. .:. ::. :. . :.:: :..::. ..... CCDS81 DFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKPVIELYKSRGVLHQFSGTE 90 100 110 120 130 140 220 230 pF1KE3 TPDVVFASILAAFSKATCKDLVMFI : . .. . . :: CCDS81 T-NKIWPYVYTLFSNKITPIQSKEAY 150 160 170 239 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:16:50 2016 done: Sun Nov 6 05:16:50 2016 Total Scan time: 2.360 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]