FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9634, 1374 aa 1>>>pF1KE9634 1374 - 1374 aa - 1374 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 12.9133+/-0.00132; mu= -8.0376+/- 0.080 mean_var=707.5752+/-144.272, 0's: 0 Z-trim(114.8): 72 B-trim: 0 in 0/55 Lambda= 0.048216 statistics sampled from 15278 (15331) to 15278 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.758), E-opt: 0.2 (0.471), width: 16 Scan time: 5.180 The best scores are: opt bits E(32554) CCDS47195.1 DROSHA gene_id:29102|Hs108|chr5 (1374) 9674 689.8 1.4e-197 CCDS47194.1 DROSHA gene_id:29102|Hs108|chr5 (1337) 7279 523.2 2e-147 >>CCDS47195.1 DROSHA gene_id:29102|Hs108|chr5 (1374 aa) initn: 9674 init1: 9674 opt: 9674 Z-score: 3660.6 bits: 689.8 E(32554): 1.4e-197 Smith-Waterman score: 9674; 99.9% identity (99.9% similar) in 1374 aa overlap (1-1374:1-1374) 10 20 30 40 50 60 pF1KE9 MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 PSLERSYKKEYKRSGRSYGLLVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHRSPSREK :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: CCDS47 PSLERSYKKEYKRSGRSYGLSVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHRSPSREK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE9 KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSEN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE9 YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE9 SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE9 KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE9 FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE9 DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE9 NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE9 QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE9 ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE9 SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE9 RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE9 FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE9 YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KE9 GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KE9 ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KE9 PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 pF1KE9 EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK 1330 1340 1350 1360 1370 >>CCDS47194.1 DROSHA gene_id:29102|Hs108|chr5 (1337 aa) initn: 9399 init1: 6986 opt: 7279 Z-score: 2760.4 bits: 523.2 E(32554): 2e-147 Smith-Waterman score: 9328; 97.2% identity (97.2% similar) in 1374 aa overlap (1-1374:1-1337) 10 20 30 40 50 60 pF1KE9 MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 PSLERSYKKEYKRSGRSYGLLVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHRSPSREK ::::::::::::::: ::::::: CCDS47 PSLERSYKKEYKRSGS-------------------------------------RSPSREK 310 320 370 380 390 400 410 420 pF1KE9 KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSEN 330 340 350 360 370 380 430 440 450 460 470 480 pF1KE9 YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS 390 400 410 420 430 440 490 500 510 520 530 540 pF1KE9 SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA 450 460 470 480 490 500 550 560 570 580 590 600 pF1KE9 KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI 510 520 530 540 550 560 610 620 630 640 650 660 pF1KE9 FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY 570 580 590 600 610 620 670 680 690 700 710 720 pF1KE9 DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA 630 640 650 660 670 680 730 740 750 760 770 780 pF1KE9 NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA 690 700 710 720 730 740 790 800 810 820 830 840 pF1KE9 QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV 750 760 770 780 790 800 850 860 870 880 890 900 pF1KE9 ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP 810 820 830 840 850 860 910 920 930 940 950 960 pF1KE9 SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS 870 880 890 900 910 920 970 980 990 1000 1010 1020 pF1KE9 RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR 930 940 950 960 970 980 1030 1040 1050 1060 1070 1080 pF1KE9 FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN 990 1000 1010 1020 1030 1040 1090 1100 1110 1120 1130 1140 pF1KE9 YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL 1050 1060 1070 1080 1090 1100 1150 1160 1170 1180 1190 1200 pF1KE9 GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA 1110 1120 1130 1140 1150 1160 1210 1220 1230 1240 1250 1260 pF1KE9 ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND 1170 1180 1190 1200 1210 1220 1270 1280 1290 1300 1310 1320 pF1KE9 PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA 1230 1240 1250 1260 1270 1280 1330 1340 1350 1360 1370 pF1KE9 EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK 1290 1300 1310 1320 1330 1374 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 10:28:39 2016 done: Sun Nov 6 10:28:40 2016 Total Scan time: 5.180 Total Display time: 0.180 Function used was FASTA [36.3.4 Apr, 2011]