FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3675, 366 aa 1>>>pF1KE3675 366 - 366 aa - 366 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7928+/-0.00101; mu= 14.3091+/- 0.060 mean_var=78.9211+/-15.395, 0's: 0 Z-trim(105.2): 104 B-trim: 0 in 0/52 Lambda= 0.144370 statistics sampled from 8201 (8313) to 8201 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.255), width: 16 Scan time: 2.480 The best scores are: opt bits E(32554) CCDS47053.1 USP46 gene_id:64854|Hs108|chr4 ( 366) 2454 520.9 7e-148 CCDS47054.1 USP46 gene_id:64854|Hs108|chr4 ( 359) 2385 506.5 1.5e-143 CCDS31952.1 USP12 gene_id:219333|Hs108|chr13 ( 370) 2201 468.2 5.2e-132 CCDS61632.1 USP8 gene_id:9101|Hs108|chr15 (1012) 414 96.2 1.3e-19 CCDS10137.1 USP8 gene_id:9101|Hs108|chr15 (1118) 414 96.2 1.4e-19 CCDS53944.1 USP50 gene_id:373509|Hs108|chr15 ( 334) 340 80.5 2.3e-15 CCDS44084.1 USP48 gene_id:84196|Hs108|chr1 ( 485) 321 76.7 4.9e-14 CCDS81277.1 USP48 gene_id:84196|Hs108|chr1 ( 983) 321 76.8 8.8e-14 CCDS30623.1 USP48 gene_id:84196|Hs108|chr1 (1035) 321 76.8 9.1e-14 CCDS2418.1 USP37 gene_id:57695|Hs108|chr2 ( 979) 316 75.8 1.8e-13 CCDS77901.1 USP17L15 gene_id:100288520|Hs108|chr4 ( 559) 312 74.8 2e-13 CCDS32755.1 USP36 gene_id:57602|Hs108|chr17 (1123) 316 75.8 2e-13 CCDS59459.1 USP17L18 gene_id:100287364|Hs108|chr4 ( 530) 301 72.5 9.4e-13 CCDS59455.1 USP17L11 gene_id:100287178|Hs108|chr4 ( 530) 301 72.5 9.4e-13 CCDS59460.1 USP17L19 gene_id:100287404|Hs108|chr4 ( 530) 301 72.5 9.4e-13 CCDS43713.1 USP17L2 gene_id:377630|Hs108|chr8 ( 530) 301 72.5 9.4e-13 CCDS59467.1 USP17L5 gene_id:728386|Hs108|chr4 ( 530) 301 72.5 9.4e-13 CCDS47535.1 USP42 gene_id:84132|Hs108|chr7 (1316) 305 73.6 1.1e-12 CCDS59463.1 USP17L22 gene_id:100287513|Hs108|chr4 ( 530) 299 72.1 1.3e-12 CCDS59458.1 USP17L17 gene_id:100287327|Hs108|chr4 ( 530) 299 72.1 1.3e-12 CCDS59471.1 USP17L30 gene_id:728419|Hs108|chr4 ( 530) 298 71.9 1.4e-12 CCDS59470.1 USP17L29 gene_id:728405|Hs108|chr4 ( 530) 298 71.9 1.4e-12 CCDS59466.1 USP17L26 gene_id:728379|Hs108|chr4 ( 530) 298 71.9 1.4e-12 CCDS59461.1 USP17L20 gene_id:100287441|Hs108|chr4 ( 530) 298 71.9 1.4e-12 CCDS59465.1 USP17L25 gene_id:728373|Hs108|chr4 ( 530) 298 71.9 1.4e-12 CCDS59469.1 USP17L28 gene_id:728400|Hs108|chr4 ( 530) 298 71.9 1.4e-12 CCDS59464.1 USP17L24 gene_id:728369|Hs108|chr4 ( 530) 298 71.9 1.4e-12 CCDS59468.1 USP17L27 gene_id:728393|Hs108|chr4 ( 530) 298 71.9 1.4e-12 CCDS58370.1 USP3 gene_id:9960|Hs108|chr15 ( 476) 296 71.4 1.8e-12 CCDS32265.1 USP3 gene_id:9960|Hs108|chr15 ( 520) 296 71.5 1.9e-12 CCDS59457.1 USP17L13 gene_id:100287238|Hs108|chr4 ( 530) 296 71.5 1.9e-12 CCDS78301.1 USP17L3 gene_id:645836|Hs108|chr8 ( 530) 295 71.3 2.2e-12 CCDS59456.1 USP17L12 gene_id:100287205|Hs108|chr4 ( 530) 294 71.1 2.6e-12 CCDS59454.1 USP17L10 gene_id:100287144|Hs108|chr4 ( 530) 294 71.1 2.6e-12 CCDS59462.1 USP17L21 gene_id:100287478|Hs108|chr4 ( 530) 294 71.1 2.6e-12 CCDS58189.1 USP2 gene_id:9099|Hs108|chr11 ( 362) 286 69.3 5.9e-12 CCDS78298.1 USP17L1 gene_id:401447|Hs108|chr8 ( 530) 288 69.8 6.1e-12 CCDS8423.1 USP2 gene_id:9099|Hs108|chr11 ( 396) 286 69.3 6.4e-12 CCDS78299.1 USP17L4 gene_id:645402|Hs108|chr8 ( 530) 287 69.6 7.1e-12 CCDS8422.1 USP2 gene_id:9099|Hs108|chr11 ( 605) 286 69.4 9.1e-12 CCDS46547.1 USP40 gene_id:55230|Hs108|chr2 (1247) 288 70.0 1.3e-11 CCDS78300.1 USP17L8 gene_id:392188|Hs108|chr8 ( 530) 280 68.1 1.9e-11 CCDS66941.1 USP7 gene_id:7874|Hs108|chr16 (1086) 282 68.7 2.7e-11 CCDS32385.1 USP7 gene_id:7874|Hs108|chr16 (1102) 282 68.7 2.7e-11 >>CCDS47053.1 USP46 gene_id:64854|Hs108|chr4 (366 aa) initn: 2454 init1: 2454 opt: 2454 Z-score: 2768.4 bits: 520.9 E(32554): 7e-148 Smith-Waterman score: 2454; 100.0% identity (100.0% similar) in 366 aa overlap (1-366:1-366) 10 20 30 40 50 60 pF1KE3 MTVRNIASICNMGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MTVRNIASICNMGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ENVLAYKAQQKKKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ENVLAYKAQQKKKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 AHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 AHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNET 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 RCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 RCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 RMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 RMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 VVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 VVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYIL 310 320 330 340 350 360 pF1KE3 FYQSRE :::::: CCDS47 FYQSRE >>CCDS47054.1 USP46 gene_id:64854|Hs108|chr4 (359 aa) initn: 2385 init1: 2385 opt: 2385 Z-score: 2690.8 bits: 506.5 E(32554): 1.5e-143 Smith-Waterman score: 2385; 99.4% identity (99.7% similar) in 357 aa overlap (10-366:3-359) 10 20 30 40 50 60 pF1KE3 MTVRNIASICNMGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFR : .:::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MNCFQGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFR 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 ENVLAYKAQQKKKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ENVLAYKAQQKKKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQD 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 AHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 AHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNET 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE3 RCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 RCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQK 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE3 RMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 RMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVA 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE3 VVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 VVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYIL 300 310 320 330 340 350 pF1KE3 FYQSRE :::::: CCDS47 FYQSRE >>CCDS31952.1 USP12 gene_id:219333|Hs108|chr13 (370 aa) initn: 2253 init1: 2201 opt: 2201 Z-score: 2483.5 bits: 468.2 E(32554): 5.2e-132 Smith-Waterman score: 2201; 88.5% identity (96.4% similar) in 366 aa overlap (1-366:5-370) 10 20 30 40 50 pF1KE3 MTVRNIASICNMGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFC ::: ..::::.::.:::::::.:::::::.:::::::::::::::::::::::::: CCDS31 MEILMTVSKFASICTMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFC 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE3 RPFRENVLAYKAQQKKKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNY :::::.:::::.: .:::.::::::::::::::::::::::::::::.::::::.::::: CCDS31 RPFREKVLAYKSQPRKKESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE3 MQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTL :::::::::::::::::::::::.:::::::.: :::... .:. :. ::::::::::: CCDS31 MQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGNIDNENNNSTPDPTWVHEIFQGTL 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE3 TNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ :::::::.:::.::::::::::::::::::::::::: :::::::::: ::::: : ::: CCDS31 TNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQ 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE3 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMY ::.:::.::::::::::::::::::.::::::::::::::::::::::::.::.: :::: CCDS31 EAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMY 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE3 DLVAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES :::::::::::::::::::.::::: :::::::::::::::::::::::::::::::::: CCDS31 DLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 310 320 330 340 350 360 360 pF1KE3 GYILFYQSRE :::::::::. CCDS31 GYILFYQSRD 370 >>CCDS61632.1 USP8 gene_id:9101|Hs108|chr15 (1012 aa) initn: 320 init1: 166 opt: 414 Z-score: 465.4 bits: 96.2 E(32554): 1.3e-19 Smith-Waterman score: 464; 31.9% identity (57.5% similar) in 348 aa overlap (36-364:672-1002) 10 20 30 40 50 60 pF1KE3 IASICNMGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCR-PFRENVL :: :.::::: ::.:: : : : . . CCDS61 CYPKAEISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCL--CNAPHLADYF 650 660 670 680 690 70 80 90 100 110 pF1KE3 AYKAQQK--KKENLLTC---LADLFHSI--ATQKKKVGVIPPKKFISRLRKENDLFDNYM . : .. ::: .:. : : : . : :: : . : :: : .: CCDS61 NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYS 700 710 720 730 740 750 120 130 140 150 160 170 pF1KE3 QQDAHEFLNYLLNTIADILQE----EKKQEKQNGKLKNGNMNEPAENNKPEL--TWVHEI :::..:.: .:.. . . :.. .. .:..: .: . . : : ... .: . . . CCDS61 QQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVAL 760 770 780 790 800 810 180 190 200 210 220 pF1KE3 FQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSIT--HCLRDFSNTETLCSEQKYYC ::: . . ..::.:. : : :. ::. . .... : ::: ::. : : .....:: CCDS61 FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYC 820 830 840 850 860 870 230 240 250 260 270 280 pF1KE3 ETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLE-LRLFNTSSD : ..... :.... ::: .: .:::::.: . .. ::. : :::: : : . CCDS61 SHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ--KLQTSVDFPLENLDLSQYVIG 880 890 900 910 920 930 290 300 310 320 330 340 pF1KE3 AVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSHGF--WLLFDDDIVEKIDAQAIEEFYGL : . :.: .: : : : . ::: . :. . :. ::: : :...... CCDS61 PKNNLKKYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVK----- 940 950 960 970 980 990 350 360 pF1KE3 TSDISKNSESGYILFYQSRE : ..::::: : CCDS61 -------SSAAYILFYTSLGPRVTDVAT 1000 1010 >>CCDS10137.1 USP8 gene_id:9101|Hs108|chr15 (1118 aa) initn: 320 init1: 166 opt: 414 Z-score: 464.8 bits: 96.2 E(32554): 1.4e-19 Smith-Waterman score: 464; 31.9% identity (57.5% similar) in 348 aa overlap (36-364:778-1108) 10 20 30 40 50 60 pF1KE3 IASICNMGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCR-PFRENVL :: :.::::: ::.:: : : : . . CCDS10 CYPKAEISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCL--CNAPHLADYF 750 760 770 780 790 800 70 80 90 100 110 pF1KE3 AYKAQQK--KKENLLTC---LADLFHSI--ATQKKKVGVIPPKKFISRLRKENDLFDNYM . : .. ::: .:. : : : . : :: : . : :: : .: CCDS10 NRNCYQDDINRSNLLGHKGEVAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYS 810 820 830 840 850 860 120 130 140 150 160 170 pF1KE3 QQDAHEFLNYLLNTIADILQE----EKKQEKQNGKLKNGNMNEPAENNKPEL--TWVHEI :::..:.: .:.. . . :.. .. .:..: .: . . : : ... .: . . . CCDS10 QQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVAL 870 880 890 900 910 920 180 190 200 210 220 pF1KE3 FQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSIT--HCLRDFSNTETLCSEQKYYC ::: . . ..::.:. : : :. ::. . .... : ::: ::. : : .....:: CCDS10 FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYC 930 940 950 960 970 980 230 240 250 260 270 280 pF1KE3 ETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLE-LRLFNTSSD : ..... :.... ::: .: .:::::.: . .. ::. : :::: : : . CCDS10 SHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ--KLQTSVDFPLENLDLSQYVIG 990 1000 1010 1020 1030 1040 290 300 310 320 330 340 pF1KE3 AVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSHGF--WLLFDDDIVEKIDAQAIEEFYGL : . :.: .: : : : . ::: . :. . :. ::: : :...... CCDS10 PKNNLKKYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVK----- 1050 1060 1070 1080 1090 350 360 pF1KE3 TSDISKNSESGYILFYQSRE : ..::::: : CCDS10 -------SSAAYILFYTSLGPRVTDVAT 1100 1110 >>CCDS53944.1 USP50 gene_id:373509|Hs108|chr15 (334 aa) initn: 282 init1: 134 opt: 340 Z-score: 389.4 bits: 80.5 E(32554): 2.3e-15 Smith-Waterman score: 340; 28.9% identity (55.0% similar) in 291 aa overlap (36-320:45-329) 10 20 30 40 50 60 pF1KE3 IASICNMGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLA :: :.:::: :.. : : :. : :. CCDS53 YHVLAECTDYYDTLPVKEADGNQPHFQGVTGLWNLGNTCCVNAISQCLCSILPLVEYFLT 20 30 40 50 60 70 70 80 90 100 110 120 pF1KE3 YK---AQQKKKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAH : : :. .. : .: :. .. . . :. : : : . : . :::::. CCDS53 GKYITALQNDCSEVATAFAYLMTDMWLGDSDC--VSPEIFWSALGNLYPAFTKKMQQDAQ 80 90 100 110 120 130 130 140 150 160 170 180 pF1KE3 EFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRC ::: .:: . . :.. . ..... . :.... . : . . ..:. :. : CCDS53 EFLICVLNELHEALKKYHYSRRRSYE-KGSTQRCCRKWITTETSIITQLFEEQLNYSIVC 140 150 160 170 180 190 190 200 210 220 230 240 pF1KE3 LNCETVSSKDEDF--LDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQK :.:: . :.: : ..: . . . :. ::. : . ..: ... .: : .:::. CCDS53 LKCEKCTYKNEVFTVFSLPIPSKYECSLRDCLQCFFQQDALTWNNEIHCSFCETKQETAV 200 210 220 230 240 250 250 260 270 280 290 pF1KE3 RMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPL-ELRLFNTSSDAVNLDRMYDLV : ..: : :. .::::: . .: :: . .:: .: : . :.: CCDS53 RASISKAPKIIIFHLKRFDIQGTTKR--KLRTDIHYPLTNLDLTPYICSIFRKYPKYNLC 260 270 280 290 300 300 310 320 330 340 350 pF1KE3 AVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI ::: : :. . ::: .. :. CCDS53 AVVNHFGDL-DGGHYTAFCKNSVTQA 310 320 330 >>CCDS44084.1 USP48 gene_id:84196|Hs108|chr1 (485 aa) initn: 298 init1: 119 opt: 321 Z-score: 365.5 bits: 76.7 E(32554): 4.9e-14 Smith-Waterman score: 410; 27.7% identity (55.8% similar) in 339 aa overlap (34-356:88-396) 10 20 30 40 50 pF1KE3 RNIASICNMGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQ----------AL . ::.:.: ::: :. :: :: CCDS44 IGEHIWLGEIDENSFHNIDDPNCERRKKNSFVGLTNLGATCYVNTFLQVWFLNLELRQAL 60 70 80 90 100 110 60 70 80 90 100 pF1KE3 YFC-RPFRENVLAYKAQQKKK-ENLLTC--LADLFHSIATQKKKVGVIPPKKFISRLRKE :.: . .:. :..: : : : :: . ..... : :. :.. : CCDS44 YLCPSTCSDYMLGDGIQEEKDYEPQTICEHLQYLFALLQNSNRR--YIDPSGFVKALG-- 120 130 140 150 160 170 110 120 130 140 150 160 pF1KE3 NDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKPELTWVH .:. .::::.:: . ... . : :...:. . .: :. CCDS44 ---LDTGQQQDAQEFSKLFMSLLEDTLSKQKNPDVRN--------------------IVQ 180 190 200 210 170 180 190 200 210 220 pF1KE3 EIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYC . : : . : : .: :. : .: .... . ..: :. .: . : : ....:.: CCDS44 QQFCGEYAYVTVCNQCGRESKLLSKFYELELNIQGHKQLTDCISEFLKEEKLEGDNRYFC 220 230 240 250 260 270 230 240 250 260 270 280 pF1KE3 ETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDA :.: :::.: ...:. .:: : :.: :: . .: . ::. . : :. .. . CCDS44 ENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNTYIGFS-EILDMEPYVEH 280 290 300 310 320 290 300 310 320 330 340 pF1KE3 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS--HGFWLLFDDDIVEKIDAQAIEEFYGLT . . .:.: ::..: : . ::::. ::. : : :.:. .::.... .. :. CCDS44 KGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEWYKFNDEDIEKMEGKKLQ--LGIE 330 340 350 360 370 380 350 360 pF1KE3 SDISKNSESGYILFYQSRE :... :.: CCDS44 EDLAEPSKSQTRKPKCGKGTHCSRNAYMLVYRLQTQEKPNTTVQVPAFLQELVDRDNSKF 390 400 410 420 430 440 >>CCDS81277.1 USP48 gene_id:84196|Hs108|chr1 (983 aa) initn: 298 init1: 119 opt: 321 Z-score: 360.9 bits: 76.8 E(32554): 8.8e-14 Smith-Waterman score: 410; 27.7% identity (55.8% similar) in 339 aa overlap (34-356:88-396) 10 20 30 40 50 pF1KE3 RNIASICNMGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQ----------AL . ::.:.: ::: :. :: :: CCDS81 IGEHIWLGEIDENSFHNIDDPNCERRKKNSFVGLTNLGATCYVNTFLQVWFLNLELRQAL 60 70 80 90 100 110 60 70 80 90 100 pF1KE3 YFC-RPFRENVLAYKAQQKKK-ENLLTC--LADLFHSIATQKKKVGVIPPKKFISRLRKE :.: . .:. :..: : : : :: . ..... : :. :.. : CCDS81 YLCPSTCSDYMLGDGIQEEKDYEPQTICEHLQYLFALLQNSNRR--YIDPSGFVKALG-- 120 130 140 150 160 170 110 120 130 140 150 160 pF1KE3 NDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKPELTWVH .:. .::::.:: . ... . : :...:. . .: :. CCDS81 ---LDTGQQQDAQEFSKLFMSLLEDTLSKQKNPDVRN--------------------IVQ 180 190 200 210 170 180 190 200 210 220 pF1KE3 EIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYC . : : . : : .: :. : .: .... . ..: :. .: . : : ....:.: CCDS81 QQFCGEYAYVTVCNQCGRESKLLSKFYELELNIQGHKQLTDCISEFLKEEKLEGDNRYFC 220 230 240 250 260 270 230 240 250 260 270 280 pF1KE3 ETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDA :.: :::.: ...:. .:: : :.: :: . .: . ::. . : :. .. . CCDS81 ENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNTYIGFS-EILDMEPYVEH 280 290 300 310 320 290 300 310 320 330 340 pF1KE3 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS--HGFWLLFDDDIVEKIDAQAIEEFYGLT . . .:.: ::..: : . ::::. ::. : : :.:. .::.... .. :. CCDS81 KGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEWYKFNDEDIEKMEGKKLQ--LGIE 330 340 350 360 370 380 350 360 pF1KE3 SDISKNSESGYILFYQSRE :... :.: CCDS81 EDLAEPSKSQTRKPKCGKGTHCSRNAYMLVYRLQTQEKPNTTVQVPAFLQELVDRDNSKF 390 400 410 420 430 440 >>CCDS30623.1 USP48 gene_id:84196|Hs108|chr1 (1035 aa) initn: 298 init1: 119 opt: 321 Z-score: 360.6 bits: 76.8 E(32554): 9.1e-14 Smith-Waterman score: 410; 27.7% identity (55.8% similar) in 339 aa overlap (34-356:88-396) 10 20 30 40 50 pF1KE3 RNIASICNMGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQ----------AL . ::.:.: ::: :. :: :: CCDS30 IGEHIWLGEIDENSFHNIDDPNCERRKKNSFVGLTNLGATCYVNTFLQVWFLNLELRQAL 60 70 80 90 100 110 60 70 80 90 100 pF1KE3 YFC-RPFRENVLAYKAQQKKK-ENLLTC--LADLFHSIATQKKKVGVIPPKKFISRLRKE :.: . .:. :..: : : : :: . ..... : :. :.. : CCDS30 YLCPSTCSDYMLGDGIQEEKDYEPQTICEHLQYLFALLQNSNRR--YIDPSGFVKALG-- 120 130 140 150 160 170 110 120 130 140 150 160 pF1KE3 NDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKPELTWVH .:. .::::.:: . ... . : :...:. . .: :. CCDS30 ---LDTGQQQDAQEFSKLFMSLLEDTLSKQKNPDVRN--------------------IVQ 180 190 200 210 170 180 190 200 210 220 pF1KE3 EIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYC . : : . : : .: :. : .: .... . ..: :. .: . : : ....:.: CCDS30 QQFCGEYAYVTVCNQCGRESKLLSKFYELELNIQGHKQLTDCISEFLKEEKLEGDNRYFC 220 230 240 250 260 270 230 240 250 260 270 280 pF1KE3 ETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDA :.: :::.: ...:. .:: : :.: :: . .: . ::. . : :. .. . CCDS30 ENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNTYIGFS-EILDMEPYVEH 280 290 300 310 320 290 300 310 320 330 340 pF1KE3 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS--HGFWLLFDDDIVEKIDAQAIEEFYGLT . . .:.: ::..: : . ::::. ::. : : :.:. .::.... .. :. CCDS30 KGGSYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEWYKFNDEDIEKMEGKKLQ--LGIE 330 340 350 360 370 380 350 360 pF1KE3 SDISKNSESGYILFYQSRE :... :.: CCDS30 EDLAEPSKSQTRKPKCGKGTHCSRNAYMLVYRLQTQEKPNTTVQVPAFLQELVDRDNSKF 390 400 410 420 430 440 >>CCDS2418.1 USP37 gene_id:57695|Hs108|chr2 (979 aa) initn: 286 init1: 102 opt: 316 Z-score: 355.3 bits: 75.8 E(32554): 1.8e-13 Smith-Waterman score: 316; 30.5% identity (56.9% similar) in 262 aa overlap (36-282:342-590) 10 20 30 40 50 60 pF1KE3 IASICNMGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLA :. :.::::: :..::.:. . : ...: CCDS24 SVKKLRCNQDYTGWNKPRVPLSSHQQQQLQGFSNLGNTCYMNAILQSLFSLQSFANDLLK 320 330 340 350 360 370 70 80 90 100 110 120 pF1KE3 YKAQQKKK--ENLLTCLADLF--HSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDA :: . :. .: :. ..: ... : .. :: . . . :..:::.:: CCDS24 QGIPWKKIPLNALIRRFAHLLVKKDICNSETKKDLL--KKVKNAISATAERFSGYMQNDA 380 390 400 410 420 130 140 150 160 170 pF1KE3 HEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPA--ENNKPELTWVHEIFQGTLTN- ::::. : : :.:. .:: : : .::. :.:.:... .. ..:: CCDS24 HEFLSQCL----DQLKED--MEKLNKTWK----TEPVSGEENSPDISATRAYTCPVITNL 430 440 450 460 470 180 190 200 210 220 230 pF1KE3 --ETR----CLNCETVSSKDEDFLDLSVDVEQNTSIT--HCLRDFSNTETLCSEQKYYCE :.. : : . : :.: :::.:. . . . ..: . : .: :: CCDS24 EFEVQHSIICKACGEIIPKREQFNDLSIDLPRRKKPLPPRSIQDSLDLFFRAEELEYSCE 480 490 500 510 520 530 240 250 260 270 280 290 pF1KE3 TCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAV : .: : : . ..:: .: :::::... : .:.. .:..: : : CCDS24 KCGGKC-ALVRHKFNRLPRVLILHLKRYSFNVALSLNNKIGQQVIIPRYLTLSSHCTENT 540 550 560 570 580 590 300 310 320 330 340 350 pF1KE3 NLDRMYDLVAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDI CCDS24 KPPFTLGWSAHMAISRPLKASQMVNSCITSPSTPSKKFTFKSKSSLALCLDSDSEDELKR 600 610 620 630 640 650 366 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 01:28:20 2016 done: Tue Nov 8 01:28:21 2016 Total Scan time: 2.480 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]