FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3113, 286 aa 1>>>pF1KE3113 286 - 286 aa - 286 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0474+/-0.00101; mu= 9.1442+/- 0.061 mean_var=182.2006+/-37.461, 0's: 0 Z-trim(111.2): 24 B-trim: 0 in 0/52 Lambda= 0.095017 statistics sampled from 12149 (12161) to 12149 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.715), E-opt: 0.2 (0.374), width: 16 Scan time: 2.220 The best scores are: opt bits E(32554) CCDS46985.1 FBXO45 gene_id:200933|Hs108|chr3 ( 286) 1974 282.5 2.5e-76 CCDS8567.1 SPSB2 gene_id:84727|Hs108|chr12 ( 263) 540 85.8 3.5e-17 CCDS3115.1 SPSB4 gene_id:92369|Hs108|chr3 ( 273) 516 82.6 3.5e-16 CCDS102.1 SPSB1 gene_id:80176|Hs108|chr1 ( 273) 490 79.0 4.2e-15 >>CCDS46985.1 FBXO45 gene_id:200933|Hs108|chr3 (286 aa) initn: 1974 init1: 1974 opt: 1974 Z-score: 1483.8 bits: 282.5 E(32554): 2.5e-76 Smith-Waterman score: 1974; 100.0% identity (100.0% similar) in 286 aa overlap (1-286:1-286) 10 20 30 40 50 60 pF1KE3 MAAPAPGAGAASGGAGCSGGGAGAGAGSGSGAAGAGGRLPSRVLELVFSYLELSELRSCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MAAPAPGAGAASGGAGCSGGGAGAGAGSGSGAAGAGGRLPSRVLELVFSYLELSELRSCA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LVCKHWYRCLHGDENSEVWRSLCARSLAEEALRTDILCNLPSYKAKIRAFQHAFSTNDCS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LVCKHWYRCLHGDENSEVWRSLCARSLAEEALRTDILCNLPSYKAKIRAFQHAFSTNDCS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RNVYIKKNGFTLHRNPIAQSTDGARTKIGFSEGRHAWEVWWEGPLGTVAVIGIATKRAPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 RNVYIKKNGFTLHRNPIAQSTDGARTKIGFSEGRHAWEVWWEGPLGTVAVIGIATKRAPM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QCQGYVALLGSDDQSWGWNLVDNNLLHNGEVNGSFPQCNNAPKYQIGERIRVILDMEDKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 QCQGYVALLGSDDQSWGWNLVDNNLLHNGEVNGSFPQCNNAPKYQIGERIRVILDMEDKT 190 200 210 220 230 240 250 260 270 280 pF1KE3 LAFERGYEFLGVAFRGLPKVCLYPAVSAVYGNTEVTLVYLGKPLDG :::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LAFERGYEFLGVAFRGLPKVCLYPAVSAVYGNTEVTLVYLGKPLDG 250 260 270 280 >>CCDS8567.1 SPSB2 gene_id:84727|Hs108|chr12 (263 aa) initn: 515 init1: 209 opt: 540 Z-score: 421.9 bits: 85.8 E(32554): 3.5e-17 Smith-Waterman score: 540; 46.3% identity (75.1% similar) in 177 aa overlap (111-282:45-219) 90 100 110 120 130 140 pF1KE3 SLCARSLAEEALRTDILCNLPSYKAKIRAFQHAFSTNDCSRNVYIKKNGFTLHRNPIAQS .:... .:::.:. .:..:. ..: :.::: CCDS85 TPQALYPDLSCPEGLEELLSAPPPDLGAQRRHGWNPKDCSENIEVKEGGLYFERRPVAQS 20 30 40 50 60 70 150 160 170 180 190 pF1KE3 TDGARTKIGFSEGRHAWEVWWEGPL---GTVAVIGIATKRAPMQCQGYVALLGSDDQSWG ::::: : :.:.: ::::. : :: :: ::.:.:: ::.: . :.:::::...::: CCDS85 TDGARGKRGYSRGLHAWEISW--PLEQRGTHAVVGVATALAPLQTDHYAALLGSNSESWG 80 90 100 110 120 130 200 210 220 230 240 250 pF1KE3 WNLVDNNLLHNGEVNGS--FPQCNNAPKYQIGERIRVILDMEDKTLAFERGYEFLGVAFR :.. ..: :... :. .: ... . .. ::. :.::::. ::.. : .:: ::: CCDS85 WDIGRGKLYHQSKGPGAPQYPAGTQGEQLEVPERLLVVLDMEEGTLGYAIGGTYLGPAFR 140 150 160 170 180 190 260 270 280 pF1KE3 GLPKVCLYPAVSAVYGNTEVTLVYLGKPLDG :: ::::::::.:. .: . :::. CCDS85 GLKGRTLYPAVSAVWGQCQVRIRYLGERRAEPHSLLHLSRLCVRHNLGDTRLGQVSALPL 200 210 220 230 240 250 >>CCDS3115.1 SPSB4 gene_id:92369|Hs108|chr3 (273 aa) initn: 460 init1: 164 opt: 516 Z-score: 403.9 bits: 82.6 E(32554): 3.5e-16 Smith-Waterman score: 516; 42.5% identity (70.5% similar) in 193 aa overlap (93-280:36-227) 70 80 90 100 110 120 pF1KE3 CKHWYRCLHGDENSEVWRSLCARSLAEEALRTDILCNLPSYKAKIRAFQHAFSTNDCSRN : : : ..:. .. ..::.. .: : : CCDS31 SGSLKSVEVREPALRPAKRELRGAEPGRPARLDQLLDMPAAGLAVQ-LRHAWNPEDRSLN 10 20 30 40 50 60 130 140 150 160 170 180 pF1KE3 VYIKKNG-FTLHRNPIAQSTDGARTKIGFSEGRHAWEVWWEG-PLGTVAVIGIATKRAPM :..: . .:.::.:.:::::: : :.: ..: :::.. : . :: ::.:.:: :::. CCDS31 VFVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHAWQINWPARQRGTHAVVGVATARAPL 70 80 90 100 110 120 190 200 210 220 230 pF1KE3 QCQGYVALLGSDDQSWGWNLVDNNLLHNGEVNG--SFPQCNNAPK-YQIGERIRVILDME . ::.::.::: .::::.: . : :.:. . ..: . . . . . . :.:::. CCDS31 HSVGYTALVGSDAESWGWDLGRSRLYHDGKNQPGVAYPAFLGPDEAFALPDSLLVVLDMD 130 140 150 160 170 180 240 250 260 270 280 pF1KE3 DKTLAFERGYEFLGVAFRGLPKVCLYPAVSAVYGNTEVTLVYLGKPLDG . ::.: ..:::::::: :::.::::.:. :::. :. CCDS31 EGTLSFIVDGQYLGVAFRGLKGKKLYPVVSAVWGHCEVTMRYINGLDPEPLPLMDLCRRS 190 200 210 220 230 240 CCDS31 IRSALGRQRLQDISSLPLPQSLKNYLQYQ 250 260 270 >>CCDS102.1 SPSB1 gene_id:80176|Hs108|chr1 (273 aa) initn: 441 init1: 162 opt: 490 Z-score: 384.6 bits: 79.0 E(32554): 4.2e-15 Smith-Waterman score: 490; 39.4% identity (69.4% similar) in 193 aa overlap (93-280:36-227) 70 80 90 100 110 120 pF1KE3 CKHWYRCLHGDENSEVWRSLCARSLAEEALRTDILCNLPSYKAKIRAFQHAFSTNDCSRN : :.: ..: . .. . :....:: : : CCDS10 TGGIKTVDMRDPTYRPLKQELQGLDYCKPTRLDLLLDMPPVSYDVQ-LLHSWNNNDRSLN 10 20 30 40 50 60 130 140 150 160 170 180 pF1KE3 VYIKKNG-FTLHRNPIAQSTDGARTKIGFSEGRHAWEVWWEG-PLGTVAVIGIATKRAPM :..:.. . .::.:.:::::. : :.:...: :.:.. : :: ::.:.:: ::. CCDS10 VFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATADAPL 70 80 90 100 110 120 190 200 210 220 230 pF1KE3 QCQGYVALLGSDDQSWGWNLVDNNLLHNGEVNGS--FPQCNNAPK-YQIGERIRVILDME . ::..:.:.. .::::.: : : :.:. . : .: . . . . . . : :::. CCDS10 HSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVALDMD 130 140 150 160 170 180 240 250 260 270 280 pF1KE3 DKTLAFERGYEFLGVAFRGLPKVCLYPAVSAVYGNTEVTLVYLGKPLDG : ::.: ...::::::: :::.::::.:. :. . :: CCDS10 DGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMRYLNGLDPEPLPLMDLCRRS 190 200 210 220 230 240 CCDS10 VRLALGRERLGEIHTLPLPASLKAYLLYQ 250 260 270 286 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 10:30:06 2016 done: Sun Nov 6 10:30:07 2016 Total Scan time: 2.220 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]