Result of FASTA (ccds) for
pFN21AE6278
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6278, 228 aa
1>>>pF1KE6278 228 - 228 aa - 228 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4003+/-0.000753; mu= 12.8803+/- 0.045
mean_var=59.2712+/-12.121, 0's: 0 Z-trim(108.1): 168 B-trim: 0 in 0/49
Lambda= 0.166591
statistics sampled from 9797 (9972) to 9797 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.698), E-opt: 0.2 (0.306), width: 16
Scan time: 1.620
The best scores are: opt bits E(32554)
CCDS46815.1 PRSS45 gene_id:377047|Hs108|chr3 ( 228) 1620 397.4 3.9e-111
CCDS10478.1 PRSS21 gene_id:10942|Hs108|chr16 ( 314) 335 88.6 4.9e-18
CCDS10431.1 TPSAB1 gene_id:7177|Hs108|chr16 ( 275) 306 81.6 5.4e-16
CCDS2745.1 PRSS50 gene_id:29122|Hs108|chr3 ( 385) 297 79.5 3.3e-15
CCDS45469.1 PRSS8 gene_id:5652|Hs108|chr16 ( 343) 296 79.3 3.5e-15
CCDS10430.1 TPSG1 gene_id:25823|Hs108|chr16 ( 321) 292 78.3 6.4e-15
CCDS46816.1 PRSS42 gene_id:339906|Hs108|chr3 ( 293) 284 76.4 2.2e-14
CCDS58185.1 TMPRSS13 gene_id:84000|Hs108|chr11 ( 563) 281 75.7 6.7e-14
CCDS55788.1 TMPRSS13 gene_id:84000|Hs108|chr11 ( 532) 276 74.5 1.5e-13
CCDS41721.1 TMPRSS13 gene_id:84000|Hs108|chr11 ( 567) 276 74.5 1.5e-13
CCDS10476.1 PRSS27 gene_id:83886|Hs108|chr16 ( 290) 263 71.3 7.4e-13
CCDS42110.1 PRSS33 gene_id:260429|Hs108|chr16 ( 280) 262 71.1 8.4e-13
CCDS32490.1 CTRB1 gene_id:1504|Hs108|chr16 ( 263) 260 70.6 1.1e-12
CCDS10481.1 PRSS22 gene_id:64063|Hs108|chr16 ( 317) 261 70.8 1.1e-12
CCDS34120.1 KLKB1 gene_id:3818|Hs108|chr4 ( 638) 264 71.7 1.3e-12
CCDS10432.1 TPSD1 gene_id:23430|Hs108|chr16 ( 242) 258 70.1 1.4e-12
CCDS13571.1 TMPRSS15 gene_id:5651|Hs108|chr21 (1019) 255 69.6 8.7e-12
CCDS3518.1 TMPRSS11D gene_id:9407|Hs108|chr4 ( 418) 248 67.8 1.2e-11
CCDS32489.1 CTRB2 gene_id:440387|Hs108|chr16 ( 263) 245 67.0 1.4e-11
CCDS33564.1 TMPRSS2 gene_id:7113|Hs108|chr21 ( 492) 248 67.8 1.4e-11
CCDS54486.1 TMPRSS2 gene_id:7113|Hs108|chr21 ( 529) 248 67.8 1.5e-11
CCDS156.1 CTRC gene_id:11330|Hs108|chr1 ( 268) 244 66.7 1.6e-11
CCDS3709.1 PRSS12 gene_id:8492|Hs108|chr4 ( 875) 249 68.1 2e-11
CCDS76482.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 290) 243 66.5 2.1e-11
CCDS58452.1 PRSS36 gene_id:146547|Hs108|chr16 ( 752) 248 67.8 2.1e-11
CCDS58453.1 PRSS36 gene_id:146547|Hs108|chr16 ( 850) 248 67.9 2.4e-11
CCDS32436.1 PRSS36 gene_id:146547|Hs108|chr16 ( 855) 248 67.9 2.4e-11
CCDS53717.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 397) 243 66.5 2.7e-11
CCDS44743.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 432) 243 66.6 3e-11
CCDS53716.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 435) 243 66.6 3e-11
CCDS31684.1 TMPRSS4 gene_id:56649|Hs108|chr11 ( 437) 243 66.6 3e-11
CCDS5279.1 PLG gene_id:5340|Hs108|chr6 ( 810) 246 67.4 3.2e-11
CCDS44442.1 PLAU gene_id:5328|Hs108|chr10 ( 414) 241 66.1 4e-11
CCDS7339.1 PLAU gene_id:5328|Hs108|chr10 ( 431) 241 66.1 4.1e-11
CCDS157.1 CELA2A gene_id:63036|Hs108|chr1 ( 269) 237 65.0 5.2e-11
CCDS3847.1 F11 gene_id:2160|Hs108|chr4 ( 625) 241 66.1 5.7e-11
CCDS219.1 CELA3B gene_id:23436|Hs108|chr1 ( 270) 236 64.8 6.2e-11
CCDS47065.1 TMPRSS11A gene_id:339967|Hs108|chr4 ( 418) 238 65.4 6.6e-11
CCDS3519.1 TMPRSS11A gene_id:339967|Hs108|chr4 ( 421) 238 65.4 6.6e-11
CCDS45388.1 PRSS21 gene_id:10942|Hs108|chr16 ( 300) 236 64.8 6.8e-11
CCDS10852.1 CTRL gene_id:1506|Hs108|chr16 ( 264) 235 64.6 7.2e-11
>>CCDS46815.1 PRSS45 gene_id:377047|Hs108|chr3 (228 aa)
initn: 1620 init1: 1620 opt: 1620 Z-score: 2108.6 bits: 397.4 E(32554): 3.9e-111
Smith-Waterman score: 1620; 100.0% identity (100.0% similar) in 228 aa overlap (1-228:1-228)
10 20 30 40 50 60
pF1KE6 MTRHWPWEVSLRMENEHVCGGALIDPSWVVTAAHCIQGTKEYSVVLGTSKLQPMNFSRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MTRHWPWEVSLRMENEHVCGGALIDPSWVVTAAHCIQGTKEYSVVLGTSKLQPMNFSRAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 WVPVRDIIMHPKYWGRAFIMGDVALVHLQTPVTFSSTANSMLTPELQEAEVFIMDNKRCD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 WVPVRDIIMHPKYWGRAFIMGDVALVHLQTPVTFSSTANSMLTPELQEAEVFIMDNKRCD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 RHYKKSFFPPVVPLVLGDMICATNYGENLCYGDSGGPLACEVEGRWILAGVLSWEKACVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 RHYKKSFFPPVVPLVLGDMICATNYGENLCYGDSGGPLACEVEGRWILAGVLSWEKACVK
130 140 150 160 170 180
190 200 210 220
pF1KE6 AQNPGVYTRITKYTKWIKKQMSNGAFSGPCASACLLFLCWLLQPQMGS
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AQNPGVYTRITKYTKWIKKQMSNGAFSGPCASACLLFLCWLLQPQMGS
190 200 210 220
>>CCDS10478.1 PRSS21 gene_id:10942|Hs108|chr16 (314 aa)
initn: 428 init1: 223 opt: 335 Z-score: 437.3 bits: 88.6 E(32554): 4.9e-18
Smith-Waterman score: 463; 34.6% identity (57.9% similar) in 266 aa overlap (5-227:53-312)
10 20 30
pF1KE6 MTRHWPWEVSLRMENEHVCGGALIDPSWVVTAAH
:::. :::. . :::: .:.. :..::::
CCDS10 SQEAAPLSGPCGRRVITSRIVGGEDAELGRWPWQGSLRLWDSHVCGVSLLSHRWALTAAH
30 40 50 60 70 80
40 50 60 70 80
pF1KE6 CIQGTKEYS------VVLGTSKLQPMNFSRALWVP---VRDIIMHPKYWGRAFIMGDVAL
:.. .. : : .: .: .: . : .: . :.: : . :.::
CCDS10 CFETYSDLSDPSGWMVQFGQLTSMPSFWSLQAYYTRYFVSNIYLSPRYLGNSPY--DIAL
90 100 110 120 130 140
90 100 110
pF1KE6 VHLQTPVTFS----------ST-------------------ANSMLTPE-LQEAEVFIMD
:.:..:::.. :: ... .:. :::..: :..
CCDS10 VKLSAPVTYTKHIQPICLQASTFEFENRTDCWVTGWGYIKEDEALPSPHTLQEVQVAIIN
150 160 170 180 190 200
120 130 140 150 160 170
pF1KE6 NKRCDRHYKKSFFPPVVPLVLGDMICATNY--GENLCYGDSGGPLACEVEGRWILAGVLS
:. :.. . : : . .:::.:: : :.. :.:::::::::. .: : ::.:
CCDS10 NSMCNHLFLKYSFRKDI---FGDMVCAGNAQGGKDACFGDSGGPLACNKNGLWYQIGVVS
210 220 230 240 250
180 190 200 210 220
pF1KE6 WEKACVKAQNPGVYTRITKYTKWIKKQMSNGAFSGPCASACLLF--LCWLLQPQMGS
: .: . . ::::: :... .::.: :.....: : : ::: : : : : .:
CCDS10 WGVGCGRPNRPGVYTNISHHFEWIQKLMAQSGMSQPDPSWPLLFFPLLWAL-PLLGPV
260 270 280 290 300 310
>>CCDS10431.1 TPSAB1 gene_id:7177|Hs108|chr16 (275 aa)
initn: 517 init1: 269 opt: 306 Z-score: 400.6 bits: 81.6 E(32554): 5.4e-16
Smith-Waterman score: 493; 36.4% identity (61.8% similar) in 228 aa overlap (5-197:42-267)
10 20 30
pF1KE6 MTRHWPWEVSLRMENE---HVCGGALIDPSWVVT
:::.::::... : :::.:: :.::.:
CCDS10 LASRAYAAPAPGQALQRVGIVGGQEAPRSKWPWQVSLRVHGPYWMHFCGGSLIHPQWVLT
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE6 AAHCI-QGTKEYSVVLGTSKLQPMNFSRALWVPVRDIIMHPKYWGRAFIMGDVALVHLQT
::::. .:. ... . : . .. : .:: ::.::... : : .:.::..:.
CCDS10 AAHCVGPDVKDLAALRVQLREQHLYYQDQL-LPVSRIIVHPQFY-TAQIGADIALLELEE
80 90 100 110 120
100 110 120
pF1KE6 PVTFSSTANSMLTPE------------------------------LQEAEVFIMDNKRCD
::. :: .... : :....: ::.:. ::
CCDS10 PVNVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFPLKQVKVPIMENHICD
130 140 150 160 170 180
130 140 150 160 170
pF1KE6 RHYK-KSFFPPVVPLVLGDMICATNYGENLCYGDSGGPLACEVEGRWILAGVLSWEKACV
.:. .. : .: ::.:: : .. : :::::::.:.:.: :. :::.:: ..:.
CCDS10 AKYHLGAYTGDDVRIVRDDMLCAGNTRRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCA
190 200 210 220 230 240
180 190 200 210 220
pF1KE6 KAQNPGVYTRITKYTKWIKKQMSNGAFSGPCASACLLFLCWLLQPQMGS
. . ::.:::.: : ::
CCDS10 QPNRPGIYTRVTYYLDWIHHYVPKKP
250 260 270
>>CCDS2745.1 PRSS50 gene_id:29122|Hs108|chr3 (385 aa)
initn: 418 init1: 197 opt: 297 Z-score: 386.5 bits: 79.5 E(32554): 3.3e-15
Smith-Waterman score: 428; 30.4% identity (59.2% similar) in 250 aa overlap (6-217:125-373)
10 20 30
pF1KE6 MTRHWPWEVSLRMENEHVCGGALIDPSWVVTAAHC
:: ::.: .. :.:.:..: .::.:.:::
CCDS27 EGKVDPYRSCGFSYEQDPTLRDPEAVARRWPWMVSVRANGTHICAGTIIASQWVLTVAHC
100 110 120 130 140 150
40 50 60 70 80
pF1KE6 -IQGTKEYSVVLGTSKLQPMNFSRALWVPVRDIIMHPKY-----WGRAFIMGDVALVHLQ
: ::: .:. .. :. . : ::: ..::: .: :. . .:..:..:.
CCDS27 LIWRDVIYSVRVGSPWIDQMT-QTASDVPVLQVIMHSRYRAQRFWSWVGQANDIGLLKLK
160 170 180 190 200 210
90 100 110
pF1KE6 TPVTFSSTANSMLTP------------------------------ELQEAEVFIMDNKRC
. .:. . . : .:: ::.:..::.:
CCDS27 QELKYSNYVRPICLPGTDYVLKDHSRCTVTGWGLSKADGMWPQFRTIQEKEVIILNNKEC
220 230 240 250 260 270
120 130 140 150 160 170
pF1KE6 DRHYKK-SFFPPVVPLVLGDMICATN-YGENLCYGDSGGPLACEVEGRWILAGVLSWEKA
: :.. . .: .: .. ..:.:: . . :..:: .: ::.: .:: : :.:..:: .
CCDS27 DNFYHNFTKIPTLVQIIKSQMMCAEDTHREKFCYELTGEPLVCSMEGTWYLVGLVSWGAG
280 290 300 310 320 330
180 190 200 210 220
pF1KE6 CVKAQNPGVYTRITKYTKWIKKQMSNGAFSGPCASACLLFLCWLLQPQMGS
: :.. : .: ....: .:: ... :.. : : ::.
CCDS27 CQKSEAPPIYLQVSSYQHWIWDCLNGQALALPAPSRTLLLALPLPLSLLAAL
340 350 360 370 380
>>CCDS45469.1 PRSS8 gene_id:5652|Hs108|chr16 (343 aa)
initn: 500 init1: 208 opt: 296 Z-score: 386.0 bits: 79.3 E(32554): 3.5e-15
Smith-Waterman score: 484; 37.4% identity (63.4% similar) in 235 aa overlap (4-202:55-286)
10 20 30
pF1KE6 MTRHWPWEVSLRMENEHVCGGALIDPSWVVTAA
.:::.::. .:. :::::.:.. .::..::
CCDS45 RSGTGAEGAEAPCGVAPQARITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAA
30 40 50 60 70 80
40 50 60 70 80
pF1KE6 HCIQGT--KE-YSVVLGTSKLQPMNFSRALWVP-VRDIIMHPKYWGRAFIMGDVALVHLQ
::. . :: : : ::. .:. ..:. : ..::: ::.: .. .::.::..:.
CCDS45 HCFPSEHHKEAYEVKLGAHQLD--SYSEDAKVSTLKDIIPHPSYLQEGS-QGDIALLQLS
90 100 110 120 130 140
90 100 110
pF1KE6 TPVTFSS--------TAN---------------------SMLTPE-LQEAEVFIMDNKRC
:.::: .:: :.:::. ::. :: ... . :
CCDS45 RPITFSRYIRPICLPAANASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETC
150 160 170 180 190 200
120 130 140 150 160 170
pF1KE6 DRHYKKSFFPPVVPLVLGDMICA--TNYGENLCYGDSGGPLACEVEGRWILAGVLSWEKA
. :. . : .: ::.:: .. :.. : :::::::.: ::: : :.:..:: :
CCDS45 NCLYNIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDA
210 220 230 240 250 260
180 190 200 210 220
pF1KE6 CVKAQNPGVYTRITKYTKWIKKQMSNGAFSGPCASACLLFLCWLLQPQMGS
: . ::::: ..:..::.....
CCDS45 CGARNRPGVYTLASSYASWIQSKVTELQPRVVPQTQESQPDSNLCGSHLAFSSAPAQGLL
270 280 290 300 310 320
>>CCDS10430.1 TPSG1 gene_id:25823|Hs108|chr16 (321 aa)
initn: 507 init1: 213 opt: 292 Z-score: 381.3 bits: 78.3 E(32554): 6.4e-15
Smith-Waterman score: 504; 37.3% identity (61.8% similar) in 241 aa overlap (5-208:49-278)
10 20 30
pF1KE6 MTRHWPWEVSLRMENEHVCGGALIDPSWVVTAAH
:::..:::.. :::::.:..:.::.::::
CCDS10 LRTLQPGCGRPQVSDAGGRIVGGHAAPAGAWPWQASLRLRRVHVCGGSLLSPQWVLTAAH
20 30 40 50 60 70
40 50 60 70 80
pF1KE6 CIQGT---KEYSVVLGTSK--LQPMNFSRALWVPVRDIIMHPKYWGRAFIMGDVALVHLQ
:..:. ..:.: :: . :.: .:: ::.::.: . :. ::.:::.:.
CCDS10 CFSGSLNSSDYQVHLGELEITLSP-HFST-----VRQIILHSSPSGQPGTSGDIALVELS
80 90 100 110 120 130
90 100 110
pF1KE6 TPVTFSSTANSMLTPE------------------------------LQEAEVFIMDNKRC
.:::.:: . :: :.:..: ..:.. :
CCDS10 VPVTLSSRILPVCLPEASDDFCPGIRCWVTGWGYTREGEPLPPPYSLREVKVSVVDTETC
140 150 160 170 180 190
120 130 140 150 160 170
pF1KE6 DRHYKKSFFPPVVPLVLGDMICATNYGENLCYGDSGGPLACEVEGRWILAGVLSWEKACV
: : : .. ::.:: . :. : ::::::.:.:.: :. ::..:: ..:
CCDS10 RRDYPG----PGGSILQPDMLCARGPGDA-CQDDSGGPLVCQVNGAWVQAGTVSWGEGCG
200 210 220 230 240
180 190 200 210 220
pF1KE6 KAQNPGVYTRITKYTKWIKKQM--SNGAFSGPCASACLLFLCWLLQPQMGS
. . ::::::. :..::.... :.:. ::
CCDS10 RPNRPGVYTRVPAYVNWIRRHITASGGSESGYPRLPLLAGFFLPGLFLLLVSCVLLAKCL
250 260 270 280 290 300
CCDS10 LHPSADGTPFPAPD
310 320
>>CCDS46816.1 PRSS42 gene_id:339906|Hs108|chr3 (293 aa)
initn: 434 init1: 192 opt: 284 Z-score: 371.5 bits: 76.4 E(32554): 2.2e-14
Smith-Waterman score: 392; 30.9% identity (61.3% similar) in 204 aa overlap (5-178:91-291)
10 20 30
pF1KE6 MTRHWPWEVSLRMENEHVCGGALIDPSWVVTAAH
:::.::.: ...:.:::.:. .::.::.:
CCDS46 NLFTSFPGDSLLCGRTPLRIVGGVDAEEGRWPWQVSVRTKGRHICGGTLVTATWVLTAGH
70 80 90 100 110 120
40 50 60 70 80 90
pF1KE6 CIQGTKEYSVVLGTSKLQPMNFSRALWVPVRDIIMHPKYWGRAFIMGDVALVHLQTPVTF
::.. .::: .: .. .: . .. : :. ..:::. . : .:.::..:: ::.:
CCDS46 CISSRFHYSVKMGDRSV--YNENTSVVVSVQRAFVHPKFSTVTTIRNDLALLQLQHPVNF
130 140 150 160 170
100 110 120
pF1KE6 SSTANSMLTPE-----------------------------LQEAEVFIMDNKRCDRHYKK
.:. . . :. ::... .:: ..:.. .:
CCDS46 TSNIQPICIPQENFQVEGRTRCWVTGWGKTPEREKLASEILQDVDQYIMCYEECNKIIQK
180 190 200 210 220 230
130 140 150 160 170 180
pF1KE6 SFFPPVVPLVLGDMICA-TNYGENLCYGDSGGPLACEVEGRWILAGVLSWEKACVKAQNP
.. . ... :.:. . :.. : ::::: :::: . :. .:..:: .:
CCDS46 AL-SSTKDVIIKGMVCGYKEQGKDSCQGDSGGRLACEYNDTWVQVGIVSWGIGCGR
240 250 260 270 280 290
190 200 210 220
pF1KE6 GVYTRITKYTKWIKKQMSNGAFSGPCASACLLFLCWLLQPQMGS
>>CCDS58185.1 TMPRSS13 gene_id:84000|Hs108|chr11 (563 aa)
initn: 378 init1: 214 opt: 281 Z-score: 363.1 bits: 75.7 E(32554): 6.7e-14
Smith-Waterman score: 423; 33.6% identity (59.2% similar) in 238 aa overlap (5-205:337-562)
10 20 30
pF1KE6 MTRHWPWEVSLRMENEHVCGGALIDPSWVVTAAH
:::.:::.. . :.:::.::: .::.::::
CCDS58 QRYISLQCSHCGLRAMTGRIVGGALASDSKWPWQVSLHFGTTHICGGTLIDAQWVLTAAH
310 320 330 340 350 360
40 50 60 70 80
pF1KE6 CIQGTKE-----YSVVLGTSKLQPMNFSRALWVPVRDIIMHPKYWGRAFIMGDVALVHLQ
:. :.: ..: :::.:. . . . . .::.. .: . . :.::..:.
CCDS58 CFFVTREKVLEGWKVYAGTSNLHQLPEAAS----IAEIIINSNYTDEEDDY-DIALMRLS
370 380 390 400 410 420
90 100 110
pF1KE6 TPVTFSS-----------------------------TANSMLTPELQEAEVFIMDNKRC-
:.:.:. ... .: :.:..: ..: :.:
CCDS58 KPLTLSAHIHPACLPMHGQTFSLNETCWITGFGKTRETDDKTSPFLREVQVNLIDFKKCN
430 440 450 460 470 480
120 130 140 150 160 170
pF1KE6 DRHYKKSFFPPVVPLVLGDMICATNY--GENLCYGDSGGPLACEVEGRWILAGVLSWEKA
: :.. : :.:: . :.. : :::::::.:: ..:: :::: :: .
CCDS58 DYLVYDSYLTP-------RMMCAGDLRGGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGTG
490 500 510 520 530
180 190 200 210 220
pF1KE6 CVKAQNPGVYTRITKYTKWIKKQMSNGAFSGPCASACLLFLCWLLQPQMGS
: . ..:::::..:. :: ..: ..:
CCDS58 CGQRNKPGVYTKVTEVLPWIYSKMESSAG
540 550 560
>>CCDS55788.1 TMPRSS13 gene_id:84000|Hs108|chr11 (532 aa)
initn: 373 init1: 209 opt: 276 Z-score: 357.0 bits: 74.5 E(32554): 1.5e-13
Smith-Waterman score: 418; 33.8% identity (59.0% similar) in 234 aa overlap (5-201:302-523)
10 20 30
pF1KE6 MTRHWPWEVSLRMENEHVCGGALIDPSWVVTAAH
:::.:::.. . :.:::.::: .::.::::
CCDS55 QRYISLQCSHCGLRAMTGRIVGGALASDSKWPWQVSLHFGTTHICGGTLIDAQWVLTAAH
280 290 300 310 320 330
40 50 60 70 80
pF1KE6 CIQGTKE-----YSVVLGTSKLQPMNFSRALWVPVRDIIMHPKYWGRAFIMGDVALVHLQ
:. :.: ..: :::.:. . . . . .::.. .: . . :.::..:.
CCDS55 CFFVTREKVLEGWKVYAGTSNLHQLPEAAS----IAEIIINSNYTDEEDDY-DIALMRLS
340 350 360 370 380
90 100 110
pF1KE6 TPVTFSS-----------------------------TANSMLTPELQEAEVFIMDNKRC-
:.:.:. ... .: :.:..: ..: :.:
CCDS55 KPLTLSAHIHPACLPMHGQTFSLNETCWITGFGKTRETDDKTSPFLREVQVNLIDFKKCN
390 400 410 420 430 440
120 130 140 150 160 170
pF1KE6 DRHYKKSFFPPVVPLVLGDMICATNY--GENLCYGDSGGPLACEVEGRWILAGVLSWEKA
: :.. : :.:: . :.. : :::::::.:: ..:: :::: :: .
CCDS55 DYLVYDSYLTP-------RMMCAGDLRGGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGTG
450 460 470 480 490
180 190 200 210 220
pF1KE6 CVKAQNPGVYTRITKYTKWIKKQMSNGAFSGPCASACLLFLCWLLQPQMGS
: . ..:::::..:. :: ..:
CCDS55 CGQRNKPGVYTKVTEVLPWIYSKMESEVRFRKS
500 510 520 530
>>CCDS41721.1 TMPRSS13 gene_id:84000|Hs108|chr11 (567 aa)
initn: 373 init1: 209 opt: 276 Z-score: 356.5 bits: 74.5 E(32554): 1.5e-13
Smith-Waterman score: 418; 33.8% identity (59.0% similar) in 234 aa overlap (5-201:337-558)
10 20 30
pF1KE6 MTRHWPWEVSLRMENEHVCGGALIDPSWVVTAAH
:::.:::.. . :.:::.::: .::.::::
CCDS41 QRYISLQCSHCGLRAMTGRIVGGALASDSKWPWQVSLHFGTTHICGGTLIDAQWVLTAAH
310 320 330 340 350 360
40 50 60 70 80
pF1KE6 CIQGTKE-----YSVVLGTSKLQPMNFSRALWVPVRDIIMHPKYWGRAFIMGDVALVHLQ
:. :.: ..: :::.:. . . . . .::.. .: . . :.::..:.
CCDS41 CFFVTREKVLEGWKVYAGTSNLHQLPEAAS----IAEIIINSNYTDEEDDY-DIALMRLS
370 380 390 400 410 420
90 100 110
pF1KE6 TPVTFSS-----------------------------TANSMLTPELQEAEVFIMDNKRC-
:.:.:. ... .: :.:..: ..: :.:
CCDS41 KPLTLSAHIHPACLPMHGQTFSLNETCWITGFGKTRETDDKTSPFLREVQVNLIDFKKCN
430 440 450 460 470 480
120 130 140 150 160 170
pF1KE6 DRHYKKSFFPPVVPLVLGDMICATNY--GENLCYGDSGGPLACEVEGRWILAGVLSWEKA
: :.. : :.:: . :.. : :::::::.:: ..:: :::: :: .
CCDS41 DYLVYDSYLTP-------RMMCAGDLRGGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGTG
490 500 510 520 530
180 190 200 210 220
pF1KE6 CVKAQNPGVYTRITKYTKWIKKQMSNGAFSGPCASACLLFLCWLLQPQMGS
: . ..:::::..:. :: ..:
CCDS41 CGQRNKPGVYTKVTEVLPWIYSKMESEVRFRKS
540 550 560
228 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 11:43:33 2016 done: Tue Nov 8 11:43:33 2016
Total Scan time: 1.620 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]