FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6169, 63 aa 1>>>pF1KE6169 63 - 63 aa - 63 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.5011+/-0.000625; mu= 8.7228+/- 0.037 mean_var=34.9195+/- 6.890, 0's: 0 Z-trim(106.9): 4 B-trim: 0 in 0/47 Lambda= 0.217040 statistics sampled from 9250 (9252) to 9250 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.284), width: 16 Scan time: 1.040 The best scores are: opt bits E(32554) CCDS46680.1 UQCR10 gene_id:29796|Hs108|chr22 ( 63) 407 133.5 8.6e-33 CCDS46681.1 UQCR10 gene_id:29796|Hs108|chr22 ( 62) 311 103.4 9.4e-24 >>CCDS46680.1 UQCR10 gene_id:29796|Hs108|chr22 (63 aa) initn: 407 init1: 407 opt: 407 Z-score: 702.2 bits: 133.5 E(32554): 8.6e-33 Smith-Waterman score: 407; 100.0% identity (100.0% similar) in 63 aa overlap (1-63:1-63) 10 20 30 40 50 60 pF1KE6 MAAATLTSKLYSLLFRRTSTFALTIIVGVMFFERAFDQGADAIYDHINEGKLWKHIKHKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MAAATLTSKLYSLLFRRTSTFALTIIVGVMFFERAFDQGADAIYDHINEGKLWKHIKHKY 10 20 30 40 50 60 pF1KE6 ENK ::: CCDS46 ENK >>CCDS46681.1 UQCR10 gene_id:29796|Hs108|chr22 (62 aa) initn: 311 init1: 311 opt: 311 Z-score: 539.9 bits: 103.4 E(32554): 9.4e-24 Smith-Waterman score: 311; 100.0% identity (100.0% similar) in 50 aa overlap (1-50:1-50) 10 20 30 40 50 60 pF1KE6 MAAATLTSKLYSLLFRRTSTFALTIIVGVMFFERAFDQGADAIYDHINEGKLWKHIKHKY :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MAAATLTSKLYSLLFRRTSTFALTIIVGVMFFERAFDQGADAIYDHINEGVRACAIPDLG 10 20 30 40 50 60 pF1KE6 ENK CCDS46 PA 63 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:02:10 2016 done: Tue Nov 8 10:02:10 2016 Total Scan time: 1.040 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]