FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3116, 291 aa 1>>>pF1KE3116 291 - 291 aa - 291 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.5573+/-0.000862; mu= 11.5484+/- 0.052 mean_var=137.6285+/-27.179, 0's: 0 Z-trim(111.6): 18 B-trim: 248 in 1/52 Lambda= 0.109325 statistics sampled from 12515 (12530) to 12515 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.385), width: 16 Scan time: 2.480 The best scores are: opt bits E(32554) CCDS46392.1 ZC3H8 gene_id:84524|Hs108|chr2 ( 291) 2001 326.5 1.4e-89 CCDS46393.1 ZC3H6 gene_id:376940|Hs108|chr2 (1189) 840 144.0 5.2e-34 CCDS42582.1 ZC3H4 gene_id:23211|Hs108|chr19 (1303) 479 87.1 7.7e-17 >>CCDS46392.1 ZC3H8 gene_id:84524|Hs108|chr2 (291 aa) initn: 2001 init1: 2001 opt: 2001 Z-score: 1721.6 bits: 326.5 E(32554): 1.4e-89 Smith-Waterman score: 2001; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291) 10 20 30 40 50 60 pF1KE3 MDFENLFSKPPNPALGKTATDSDERIDDEIDTEVEETQEEKIKLECEQIPKKFRHSAISP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MDFENLFSKPPNPALGKTATDSDERIDDEIDTEVEETQEEKIKLECEQIPKKFRHSAISP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 KSSLHRKSRSKDYDVYSDNDICSQESEDNFAKELQQYIQAREMANAAQPEESTKKEGVKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 KSSLHRKSRSKDYDVYSDNDICSQESEDNFAKELQQYIQAREMANAAQPEESTKKEGVKD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 TPQAAKQKNKNLKAGHKNGKQKKMKRKWPGPGNKGSNALLRNSGSQEEDGKPKEKQQHLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 TPQAAKQKNKNLKAGHKNGKQKKMKRKWPGPGNKGSNALLRNSGSQEEDGKPKEKQQHLS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QAFINQHTVERKGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 QAFINQHTVERKGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENC 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 LYLHNEYPCKFYHTGTKCYQGEYCKFSHAPLTPETQELLAKVLDTEKKSCK ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LYLHNEYPCKFYHTGTKCYQGEYCKFSHAPLTPETQELLAKVLDTEKKSCK 250 260 270 280 290 >>CCDS46393.1 ZC3H6 gene_id:376940|Hs108|chr2 (1189 aa) initn: 887 init1: 744 opt: 840 Z-score: 724.0 bits: 144.0 E(32554): 5.2e-34 Smith-Waterman score: 869; 49.0% identity (72.4% similar) in 294 aa overlap (22-288:77-369) 10 20 30 40 pF1KE3 MDFENLFSKPPNPALGKTATDSDERIDDEIDTEVEETQEEKIK----LECE ::. : .:..::.:. . : . CCDS46 RKSRKKHKKEREKKKSKRRKREKHKHNSPSSDDSSDYSLDSDVEHTESSHKKRTGFYRDY 50 60 70 80 90 100 50 60 70 80 pF1KE3 QIPKKFR-H---SAISPKSSLH-RKSRSKDYD---VYSDNDICS----------QESEDN .:: : : : :. :.. : .: .::.:: .:::... . ::.:.. CCDS46 DIPFTQRGHISGSYITSKKGQHNKKFKSKEYDEYSTYSDDNFGNYSDDNFGNYGQETEED 110 120 130 140 150 160 90 100 110 120 130 140 pF1KE3 FAKELQQYIQAREMANAAQ----PEESTKKEGVKDTPQAAKQKNKNLKAGHKNGKQKKMK ::..:.:: ::.: .: : .:: ::. .: . :. .:. :....:. : ::.: CCDS46 FANQLKQYRQAKETSNIALGSSFSKESGKKQRMKGVQQGIEQRVKSFNVGRGRGLPKKIK 170 180 190 200 210 220 150 160 170 180 190 200 pF1KE3 RKWPGP-GNKGSNALLRNSGSQEEDGKPKEKQQHLSQAFINQHTVERKGKQICKYFLERK :: : ::: :.. .. :: . :: .: . ..: ::::::::.::::::::::: . CCDS46 RKERGGRTNKGPNVFSVSDDFQEYN-KPGKKWKVMTQEFINQHTVEHKGKQICKYFLEGR 230 240 250 260 270 280 210 220 230 240 250 260 pF1KE3 CIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGTKCYQGEYC ::::::::::::::.::.::.::::.:::::.::::.:.:::.::::::.:.:::::. : CCDS46 CIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGAKCYQGDNC 290 300 310 320 330 340 270 280 290 pF1KE3 KFSHAPLTPETQELLAKVLDTEKKSCK :::: :: ::..:: :::.:... CCDS46 KFSHDDLTKETKKLLDKVLNTDEELINEDERELEELRKRGITPLPKPPPGVGLLPTPPEH 350 360 370 380 390 400 >>CCDS42582.1 ZC3H4 gene_id:23211|Hs108|chr19 (1303 aa) initn: 566 init1: 435 opt: 479 Z-score: 415.8 bits: 87.1 E(32554): 7.7e-17 Smith-Waterman score: 479; 35.9% identity (68.0% similar) in 206 aa overlap (85-283:279-482) 60 70 80 90 100 110 pF1KE3 HSAISPKSSLHRKSRSKDYDVYSDNDICSQESEDNFAKELQQYIQAREMANAAQPEESTK :.:..: .: ..: ...: . . .: .: CCDS42 GRGSRGGSRGRGMGRGSRGRGRGSMGGDHPEDEEDFYEEEMDYGESEEPMGDDDYDEYSK 250 260 270 280 290 300 120 130 140 150 160 170 pF1KE3 KEGVKDTPQAAKQKNKNLKAGHKNGKQKKMKRKWPGPGNKGSNALLRNSGSQEEDGKPKE . ... .. .....:. :. :.. . : : : :: . . ..: .... : CCDS42 E--LNQYRRSKDSRGRGLSRGRGRGSRGRGKGMGRGRGRGGSRGGMNKGGMNDDEDFYDE 310 320 330 340 350 360 180 190 200 210 220 pF1KE3 KQ------QHLSQAFINQHT-VERKGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCK . .. :. . : ..::: :::::.: .: ::.:.:.:: :. ::.:.:: CCDS42 DMGDGGGGSYRSRDHDKPHQQSDKKGKVICKYFVEGRCTWGDHCNFSHDIELPKKRELCK 370 380 390 400 410 420 230 240 250 260 270 280 pF1KE3 FYVQGYCTRGENCLYLHNEYPCKFYHTGTKCYQGEYCKFSHAPLTPETQELLAKVLDTEK ::. :.:.:.::: :.:...:::.::: .: .:. : ::: ::: ::.::: :.: CCDS42 FYITGFCARAENCPYMHGDFPCKLYHTTGNCINGDDCMFSHDPLTEETRELLDKMLADDA 430 440 450 460 470 480 290 pF1KE3 KSCK CCDS42 EAGAEDEKEVEELKKQGINPLPKPPPGVGLLPTPPRPPGPQAPTSPNGRPMQGGPPPPPP 490 500 510 520 530 540 291 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 10:32:09 2016 done: Sun Nov 6 10:32:10 2016 Total Scan time: 2.480 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]