FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5639, 562 aa 1>>>pF1KE5639 562 - 562 aa - 562 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.8043+/-0.000921; mu= 4.0817+/- 0.055 mean_var=242.2698+/-49.519, 0's: 0 Z-trim(114.1): 37 B-trim: 129 in 2/50 Lambda= 0.082400 statistics sampled from 14622 (14638) to 14622 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.776), E-opt: 0.2 (0.45), width: 16 Scan time: 2.870 The best scores are: opt bits E(32554) CCDS46140.1 CCDC155 gene_id:147872|Hs108|chr19 ( 562) 3718 455.1 1e-127 >>CCDS46140.1 CCDC155 gene_id:147872|Hs108|chr19 (562 aa) initn: 3718 init1: 3718 opt: 3718 Z-score: 2406.5 bits: 455.1 E(32554): 1e-127 Smith-Waterman score: 3718; 99.8% identity (100.0% similar) in 562 aa overlap (1-562:1-562) 10 20 30 40 50 60 pF1KE5 MDLPEGPVGGPTAEMYLRERPEEARLGMPVSLEEQILNSTFEACDPQRTGTVAVAQVLAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MDLPEGPVGGPTAEMYLRERPEEARLGMPVSLEEQILNSTFEACDPQRTGTVAVAQVLAY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LEAVTGQGPQDARLQTLANSLDPNGEGPKATVDLDTFLVVMRDWIAACQLHGGLELEEET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LEAVTGQGPQDARLQTLANSLDPNGEGPKATVDLDTFLVVMRDWIAACQLHGGLELEEET 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 AFQGALTSQQLPSGCPEAEEPANLESFGGEDPRPELQATADLLSSLEDLELSNRRLVGEN ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 AFQGALTSRQLPSGCPEAEEPANLESFGGEDPRPELQATADLLSSLEDLELSNRRLVGEN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 AKLQRSMETAEEGSARLGEEILALRKQLHSTQQALQFAKAMDEELEDLKTLARSLEEQNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 AKLQRSMETAEEGSARLGEEILALRKQLHSTQQALQFAKAMDEELEDLKTLARSLEEQNR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 SLLAQARQAEKEQQHLVAEMETLQEENGKLLAERDGVKKRSQELAMEKDTLKRQLFECEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 SLLAQARQAEKEQQHLVAEMETLQEENGKLLAERDGVKKRSQELAMEKDTLKRQLFECEH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 LICQRDTILSERTRDVESLAQTLEEYRVTTQELRLEISRLEEQLSQTYEGPDELPEGAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LICQRDTILSERTRDVESLAQTLEEYRVTTQELRLEISRLEEQLSQTYEGPDELPEGAQL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 RRVGWTELLPPSLGLEIEAIRQKQEVATADLSNPLCGVWQWEEVIHETSEETEFPSEAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 RRVGWTELLPPSLGLEIEAIRQKQEVATADLSNPLCGVWQWEEVIHETSEETEFPSEAPA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 GGQRNFQGEPAHPEEGRKEPSMWLTRREEEEDAESQVTADLPVPLGAPRPGDIPENPPER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 GGQRNFQGEPAHPEEGRKEPSMWLTRREEEEDAESQVTADLPVPLGAPRPGDIPENPPER 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 PARRELQQALVPVMKKLVPVRRRAWGQLCLPPQRLRVTRHPLIPAPVLGLLLLLLLSVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 PARRELQQALVPVMKKLVPVRRRAWGQLCLPPQRLRVTRHPLIPAPVLGLLLLLLLSVLL 490 500 510 520 530 540 550 560 pF1KE5 LGPSPPPTWPHLQLCYLQPPPV :::::::::::::::::::::: CCDS46 LGPSPPPTWPHLQLCYLQPPPV 550 560 562 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:26:31 2016 done: Tue Nov 8 05:26:31 2016 Total Scan time: 2.870 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]