FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1211, 132 aa 1>>>pF1KE1211 132 - 132 aa - 132 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9757+/-0.000852; mu= 12.5057+/- 0.051 mean_var=58.1826+/-11.425, 0's: 0 Z-trim(106.6): 35 B-trim: 0 in 0/47 Lambda= 0.168143 statistics sampled from 9030 (9060) to 9030 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.65), E-opt: 0.2 (0.278), width: 16 Scan time: 1.380 The best scores are: opt bits E(32554) CCDS46135.1 BSPH1 gene_id:100131137|Hs108|chr19 ( 132) 963 241.4 1.2e-64 CCDS12708.1 ELSPBP1 gene_id:64100|Hs108|chr19 ( 223) 335 89.2 1.3e-18 >>CCDS46135.1 BSPH1 gene_id:100131137|Hs108|chr19 (132 aa) initn: 963 init1: 963 opt: 963 Z-score: 1274.2 bits: 241.4 E(32554): 1.2e-64 Smith-Waterman score: 963; 99.2% identity (99.2% similar) in 132 aa overlap (1-132:1-132) 10 20 30 40 50 60 pF1KE1 MGSLMLLFVETMRNSSACIFPVILNELSSTVETITHFPEVTDGECVFPFHYKNGTYYDCI ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MGSLMLLFVETTRNSSACIFPVILNELSSTVETITHFPEVTDGECVFPFHYKNGTYYDCI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 KSKARHKWCSLNKTYEGYWKFCSAEDFANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 KSKARHKWCSLNKTYEGYWKFCSAEDFANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTK 70 80 90 100 110 120 130 pF1KE1 NFNKDRIWKYCE :::::::::::: CCDS46 NFNKDRIWKYCE 130 >>CCDS12708.1 ELSPBP1 gene_id:64100|Hs108|chr19 (223 aa) initn: 335 init1: 335 opt: 335 Z-score: 447.5 bits: 89.2 E(32554): 1.3e-18 Smith-Waterman score: 335; 42.7% identity (70.8% similar) in 89 aa overlap (44-132:28-116) 20 30 40 50 60 70 pF1KE1 NSSACIFPVILNELSSTVETITHFPEVTDGECVFPFHYKNGTYYDCIKSKARHKWCSLNK :::::: ::...:. : . .. ::. CCDS12 MTRWSSYLLGWTTFLLYSYESSGGMHEECVFPFTYKGSVYFTCTHIHSLSPWCATRA 10 20 30 40 50 80 90 100 110 120 130 pF1KE1 TYEGYWKFCSAEDFANCVFPFWYRRLIYWECTDDGEAFGKKWCSLTKNFNKDRIWKYCE .:.: ::.:..::. :.::: :: : : ..: .:. :::.:. :.. . ::.:: CCDS12 VYNGQWKYCQSEDYPRCIFPFIYRGKAYNSCISQGSFLGSLWCSVTSVFDEKQQWKFCET 60 70 80 90 100 110 CCDS12 NEYGGNSLRKPCIFPSIYRNNVVSDCMEDESNKLWCPTTENMDKDGKWSFCADTRISALV 120 130 140 150 160 170 132 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 10:34:49 2016 done: Sun Nov 6 10:34:49 2016 Total Scan time: 1.380 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]