FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9602, 197 aa 1>>>pF1KE9602 197 - 197 aa - 197 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.1834+/-0.000982; mu= 0.6964+/- 0.059 mean_var=157.3542+/-31.097, 0's: 0 Z-trim(110.1): 18 B-trim: 95 in 1/52 Lambda= 0.102243 statistics sampled from 11329 (11338) to 11329 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.348), width: 16 Scan time: 2.280 The best scores are: opt bits E(32554) CCDS45974.1 SPC24 gene_id:147841|Hs108|chr19 ( 197) 1260 197.0 6.4e-51 >>CCDS45974.1 SPC24 gene_id:147841|Hs108|chr19 (197 aa) initn: 1260 init1: 1260 opt: 1260 Z-score: 1027.7 bits: 197.0 E(32554): 6.4e-51 Smith-Waterman score: 1260; 100.0% identity (100.0% similar) in 197 aa overlap (1-197:1-197) 10 20 30 40 50 60 pF1KE9 MAAFRDIEEVSQGLLSLLGANRAEAQQRRLLGRHEQVVERLLETQDGAEKQLREILTMEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MAAFRDIEEVSQGLLSLLGANRAEAQQRRLLGRHEQVVERLLETQDGAEKQLREILTMEK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 EVAQSLLNAKEQVHQGGVELQQLEAGLQEAGEEDTRLKASLLQLTRELEELKEIEADLER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 EVAQSLLNAKEQVHQGGVELQQLEAGLQEAGEEDTRLKASLLQLTRELEELKEIEADLER 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 QEKEVDEDTTVTIPSAVYVAQLYHQVSKIEWDYECEPGMVKGIHHGPSVAQPIHLDSTQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 QEKEVDEDTTVTIPSAVYVAQLYHQVSKIEWDYECEPGMVKGIHHGPSVAQPIHLDSTQL 130 140 150 160 170 180 190 pF1KE9 SRKFISDYLWSLVDTEW ::::::::::::::::: CCDS45 SRKFISDYLWSLVDTEW 190 197 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:29:57 2016 done: Sun Nov 6 06:29:57 2016 Total Scan time: 2.280 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]