FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3678, 317 aa 1>>>pF1KE3678 317 - 317 aa - 317 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.3099+/-0.00034; mu= 8.9981+/- 0.021 mean_var=177.9123+/-36.310, 0's: 0 Z-trim(121.2): 102 B-trim: 634 in 1/56 Lambda= 0.096155 statistics sampled from 37418 (37528) to 37418 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.776), E-opt: 0.2 (0.44), width: 16 Scan time: 8.340 The best scores are: opt bits E(85289) NP_006330 (OMIM: 605535) SWI/SNF-related matrix-as ( 317) 2100 302.9 5.8e-82 XP_016881633 (OMIM: 605535) PREDICTED: SWI/SNF-rel ( 316) 2082 300.4 3.3e-81 XP_011519460 (OMIM: 605534) PREDICTED: high mobili ( 347) 984 148.1 2.5e-35 NP_060670 (OMIM: 605534) high mobility group prote ( 347) 984 148.1 2.5e-35 NP_001291433 (OMIM: 605534) high mobility group pr ( 347) 984 148.1 2.5e-35 NP_001291434 (OMIM: 605534) high mobility group pr ( 234) 826 126.0 7.4e-29 XP_011521304 (OMIM: 611416) PREDICTED: TOX high mo ( 553) 247 46.0 0.00021 NP_001139660 (OMIM: 611416) TOX high mobility grou ( 571) 247 46.1 0.00021 XP_016878631 (OMIM: 611416) PREDICTED: TOX high mo ( 572) 247 46.1 0.00021 XP_005255949 (OMIM: 611416) PREDICTED: TOX high mo ( 575) 247 46.1 0.00021 NP_001073899 (OMIM: 611416) TOX high mobility grou ( 576) 247 46.1 0.00021 NP_001288158 (OMIM: 300193,300915) high mobility g ( 200) 234 43.8 0.00035 NP_005333 (OMIM: 300193,300915) high mobility grou ( 200) 234 43.8 0.00035 NP_001288157 (OMIM: 300193,300915) high mobility g ( 200) 234 43.8 0.00035 NP_001288160 (OMIM: 300193,300915) high mobility g ( 220) 234 43.9 0.00038 XP_016869574 (OMIM: 606863) PREDICTED: thymocyte s ( 504) 239 44.9 0.00042 NP_055544 (OMIM: 606863) thymocyte selection-assoc ( 526) 239 44.9 0.00043 NP_002119 (OMIM: 163905) high mobility group prote ( 215) 231 43.4 0.00049 NP_001300821 (OMIM: 163905) high mobility group pr ( 215) 231 43.4 0.00049 NP_001300822 (OMIM: 163905) high mobility group pr ( 215) 231 43.4 0.00049 NP_002120 (OMIM: 163906) high mobility group prote ( 209) 222 42.2 0.0011 NP_001124160 (OMIM: 163906) high mobility group pr ( 209) 222 42.2 0.0011 NP_001124161 (OMIM: 163906) high mobility group pr ( 209) 222 42.2 0.0011 NP_003104 (OMIM: 604585) nuclear autoantigen Sp-10 ( 879) 225 43.2 0.0024 NP_001092266 (OMIM: 611163) TOX high mobility grou ( 464) 216 41.7 0.0036 NP_116272 (OMIM: 611163) TOX high mobility group b ( 464) 216 41.7 0.0036 NP_001092267 (OMIM: 611163) TOX high mobility grou ( 506) 216 41.7 0.0038 XP_006723947 (OMIM: 611163) PREDICTED: TOX high mo ( 515) 216 41.7 0.0038 NP_001290452 (OMIM: 614032) TOX high mobility grou ( 598) 216 41.8 0.0043 NP_055643 (OMIM: 614032) TOX high mobility group b ( 621) 216 41.8 0.0044 NP_003070 (OMIM: 603111,607174,616938) SWI/SNF-rel ( 411) 206 40.2 0.0086 >>NP_006330 (OMIM: 605535) SWI/SNF-related matrix-associ (317 aa) initn: 2100 init1: 2100 opt: 2100 Z-score: 1592.5 bits: 302.9 E(85289): 5.8e-82 Smith-Waterman score: 2100; 100.0% identity (100.0% similar) in 317 aa overlap (1-317:1-317) 10 20 30 40 50 60 pF1KE3 MSHGPKQPGAAAAPAGGKAPGQHGGFVVTVKQERGEGPRAGEKGSHEEEPVKKRGWPKGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MSHGPKQPGAAAAPAGGKAPGQHGGFVVTVKQERGEGPRAGEKGSHEEEPVKKRGWPKGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 KRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 KRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DEAEREKQQYMKELRAYQQSEAYKMCTEKIQEKKIKKEDSSSGLMNTLLNGHKGGDCDGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 DEAEREKQQYMKELRAYQQSEAYKMCTEKIQEKKIKKEDSSSGLMNTLLNGHKGGDCDGF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 STFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQNAVLQRHTQSMSSARERLEQELAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 STFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQNAVLQRHTQSMSSARERLEQELAL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EERRTLALQQQLQAVRQALTASFASLPVPGTGETPTLGTLDFYMARLHGAIERDPAQHEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 EERRTLALQQQLQAVRQALTASFASLPVPGTGETPTLGTLDFYMARLHGAIERDPAQHEK 250 260 270 280 290 300 310 pF1KE3 LIVRIKEILAQVASEHL ::::::::::::::::: NP_006 LIVRIKEILAQVASEHL 310 >>XP_016881633 (OMIM: 605535) PREDICTED: SWI/SNF-related (316 aa) initn: 1093 init1: 1093 opt: 2082 Z-score: 1579.0 bits: 300.4 E(85289): 3.3e-81 Smith-Waterman score: 2082; 99.7% identity (99.7% similar) in 317 aa overlap (1-317:1-316) 10 20 30 40 50 60 pF1KE3 MSHGPKQPGAAAAPAGGKAPGQHGGFVVTVKQERGEGPRAGEKGSHEEEPVKKRGWPKGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSHGPKQPGAAAAPAGGKAPGQHGGFVVTVKQERGEGPRAGEKGSHEEEPVKKRGWPKGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 KRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DEAEREKQQYMKELRAYQQSEAYKMCTEKIQEKKIKKEDSSSGLMNTLLNGHKGGDCDGF ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: XP_016 DEAEREKQQYMKELRAYQQSEAYKMCTEKIQEKKIKK-DSSSGLMNTLLNGHKGGDCDGF 130 140 150 160 170 190 200 210 220 230 240 pF1KE3 STFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQNAVLQRHTQSMSSARERLEQELAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 STFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQNAVLQRHTQSMSSARERLEQELAL 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE3 EERRTLALQQQLQAVRQALTASFASLPVPGTGETPTLGTLDFYMARLHGAIERDPAQHEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EERRTLALQQQLQAVRQALTASFASLPVPGTGETPTLGTLDFYMARLHGAIERDPAQHEK 240 250 260 270 280 290 310 pF1KE3 LIVRIKEILAQVASEHL ::::::::::::::::: XP_016 LIVRIKEILAQVASEHL 300 310 >>XP_011519460 (OMIM: 605534) PREDICTED: high mobility g (347 aa) initn: 932 init1: 858 opt: 984 Z-score: 755.3 bits: 148.1 E(85289): 2.5e-35 Smith-Waterman score: 984; 48.4% identity (77.8% similar) in 320 aa overlap (1-312:31-345) 10 20 30 pF1KE3 MSHGPKQPGAAAAPAGGKAPGQHGGFVVTV ..: :. : ...: .. . : :: . XP_011 MENLMTSSTLPPLFADEDGSKESNDLATTGLNH-PEVPYSSGATSSTNNP----EFVEDL 10 20 30 40 50 40 50 60 70 80 pF1KE3 KQER---GEGPRA--GEKGSHEEEPVKKRG-WPKGKKRKKIL--PNGPKAPVTGYVRFLN .: . .:. : :.. ::.: .::: : ::.:::: : :.::.:.::::::.: XP_011 SQGQLLQSESSNAAEGNEQRHEDEQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMN 60 70 80 90 100 110 90 100 110 120 130 140 pF1KE3 ERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAEREKQQYMKELRAYQQSEA :::::.:...:..::::::.::: ::::: : :::::::::.:.:..:::::. ::..:: XP_011 ERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQKTEA 120 130 140 150 160 170 150 160 170 180 190 200 pF1KE3 YKMCTEKIQEKKIKKEDSSSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAE ::. ..: :... : ... .. . .: . :.::.::::::::...:::::: XP_011 YKVFSRKTQDRQKGKSHRQDAARQATHDHEKETEVKERSVFDIPIFTEEFLNHSKAREAE 180 190 200 210 220 230 210 220 230 240 250 260 pF1KE3 LRRLRKMNVAFEEQNAVLQRHTQSMSSARERLEQELALEERRTLALQQQLQAVRQALTAS ::.::: :. :::.::.::.:..:: .: :.:: .. :. :. .:::.:...::.::.: XP_011 LRQLRKSNMEFEERNAALQKHVESMRTAVEKLEVDVIQERSRNTVLQQHLETLRQVLTSS 240 250 260 270 280 290 270 280 290 300 310 pF1KE3 FASLPVPGTGETPTLGTLDFYMARLHGAIERDPAQHEKLIVRIKEILAQVASEHL :::.:.::.:::::. :.: :: :::. : .: ..:..:. ..:.. .. XP_011 FASMPLPGSGETPTVDTIDSYMNRLHSIILANPQDNENFIATVREVVNRLDR 300 310 320 330 340 >>NP_060670 (OMIM: 605534) high mobility group protein 2 (347 aa) initn: 932 init1: 858 opt: 984 Z-score: 755.3 bits: 148.1 E(85289): 2.5e-35 Smith-Waterman score: 984; 48.4% identity (77.8% similar) in 320 aa overlap (1-312:31-345) 10 20 30 pF1KE3 MSHGPKQPGAAAAPAGGKAPGQHGGFVVTV ..: :. : ...: .. . : :: . NP_060 MENLMTSSTLPPLFADEDGSKESNDLATTGLNH-PEVPYSSGATSSTNNP----EFVEDL 10 20 30 40 50 40 50 60 70 80 pF1KE3 KQER---GEGPRA--GEKGSHEEEPVKKRG-WPKGKKRKKIL--PNGPKAPVTGYVRFLN .: . .:. : :.. ::.: .::: : ::.:::: : :.::.:.::::::.: NP_060 SQGQLLQSESSNAAEGNEQRHEDEQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMN 60 70 80 90 100 110 90 100 110 120 130 140 pF1KE3 ERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAEREKQQYMKELRAYQQSEA :::::.:...:..::::::.::: ::::: : :::::::::.:.:..:::::. ::..:: NP_060 ERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQKTEA 120 130 140 150 160 170 150 160 170 180 190 200 pF1KE3 YKMCTEKIQEKKIKKEDSSSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAE ::. ..: :... : ... .. . .: . :.::.::::::::...:::::: NP_060 YKVFSRKTQDRQKGKSHRQDAARQATHDHEKETEVKERSVFDIPIFTEEFLNHSKAREAE 180 190 200 210 220 230 210 220 230 240 250 260 pF1KE3 LRRLRKMNVAFEEQNAVLQRHTQSMSSARERLEQELALEERRTLALQQQLQAVRQALTAS ::.::: :. :::.::.::.:..:: .: :.:: .. :. :. .:::.:...::.::.: NP_060 LRQLRKSNMEFEERNAALQKHVESMRTAVEKLEVDVIQERSRNTVLQQHLETLRQVLTSS 240 250 260 270 280 290 270 280 290 300 310 pF1KE3 FASLPVPGTGETPTLGTLDFYMARLHGAIERDPAQHEKLIVRIKEILAQVASEHL :::.:.::.:::::. :.: :: :::. : .: ..:..:. ..:.. .. NP_060 FASMPLPGSGETPTVDTIDSYMNRLHSIILANPQDNENFIATVREVVNRLDR 300 310 320 330 340 >>NP_001291433 (OMIM: 605534) high mobility group protei (347 aa) initn: 932 init1: 858 opt: 984 Z-score: 755.3 bits: 148.1 E(85289): 2.5e-35 Smith-Waterman score: 984; 48.4% identity (77.8% similar) in 320 aa overlap (1-312:31-345) 10 20 30 pF1KE3 MSHGPKQPGAAAAPAGGKAPGQHGGFVVTV ..: :. : ...: .. . : :: . NP_001 MENLMTSSTLPPLFADEDGSKESNDLATTGLNH-PEVPYSSGATSSTNNP----EFVEDL 10 20 30 40 50 40 50 60 70 80 pF1KE3 KQER---GEGPRA--GEKGSHEEEPVKKRG-WPKGKKRKKIL--PNGPKAPVTGYVRFLN .: . .:. : :.. ::.: .::: : ::.:::: : :.::.:.::::::.: NP_001 SQGQLLQSESSNAAEGNEQRHEDEQRSKRGGWSKGRKRKKPLRDSNAPKSPLTGYVRFMN 60 70 80 90 100 110 90 100 110 120 130 140 pF1KE3 ERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAEREKQQYMKELRAYQQSEA :::::.:...:..::::::.::: ::::: : :::::::::.:.:..:::::. ::..:: NP_001 ERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKELEQYQKTEA 120 130 140 150 160 170 150 160 170 180 190 200 pF1KE3 YKMCTEKIQEKKIKKEDSSSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAE ::. ..: :... : ... .. . .: . :.::.::::::::...:::::: NP_001 YKVFSRKTQDRQKGKSHRQDAARQATHDHEKETEVKERSVFDIPIFTEEFLNHSKAREAE 180 190 200 210 220 230 210 220 230 240 250 260 pF1KE3 LRRLRKMNVAFEEQNAVLQRHTQSMSSARERLEQELALEERRTLALQQQLQAVRQALTAS ::.::: :. :::.::.::.:..:: .: :.:: .. :. :. .:::.:...::.::.: NP_001 LRQLRKSNMEFEERNAALQKHVESMRTAVEKLEVDVIQERSRNTVLQQHLETLRQVLTSS 240 250 260 270 280 290 270 280 290 300 310 pF1KE3 FASLPVPGTGETPTLGTLDFYMARLHGAIERDPAQHEKLIVRIKEILAQVASEHL :::.:.::.:::::. :.: :: :::. : .: ..:..:. ..:.. .. NP_001 FASMPLPGSGETPTVDTIDSYMNRLHSIILANPQDNENFIATVREVVNRLDR 300 310 320 330 340 >>NP_001291434 (OMIM: 605534) high mobility group protei (234 aa) initn: 808 init1: 786 opt: 826 Z-score: 639.0 bits: 126.0 E(85289): 7.4e-29 Smith-Waterman score: 826; 51.7% identity (82.8% similar) in 232 aa overlap (81-312:1-232) 60 70 80 90 100 110 pF1KE3 VKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSK .::::::.:...:..::::::.::: :::: NP_001 MNERREQLRAKRPEVPFPEITRMLGNEWSK 10 20 30 120 130 140 150 160 170 pF1KE3 LQPTEKQRYLDEAEREKQQYMKELRAYQQSEAYKMCTEKIQEKKIKKEDSSSGLMNTLLN : : :::::::::.:.:..:::::. ::..::::. ..: :... : ... .. . NP_001 LPPEEKQRYLDEADRDKERYMKELEQYQKTEAYKVFSRKTQDRQKGKSHRQDAARQATHD 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE3 GHKGGDCDGFSTFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQNAVLQRHTQSMSSA .: . :.::.::::::::...::::::::.::: :. :::.::.::.:..:: .: NP_001 HEKETEVKERSVFDIPIFTEEFLNHSKAREAELRQLRKSNMEFEERNAALQKHVESMRTA 100 110 120 130 140 150 240 250 260 270 280 290 pF1KE3 RERLEQELALEERRTLALQQQLQAVRQALTASFASLPVPGTGETPTLGTLDFYMARLHGA :.:: .. :. :. .:::.:...::.::.::::.:.::.:::::. :.: :: :::. NP_001 VEKLEVDVIQERSRNTVLQQHLETLRQVLTSSFASMPLPGSGETPTVDTIDSYMNRLHSI 160 170 180 190 200 210 300 310 pF1KE3 IERDPAQHEKLIVRIKEILAQVASEHL : .: ..:..:. ..:.. .. NP_001 ILANPQDNENFIATVREVVNRLDR 220 230 >>XP_011521304 (OMIM: 611416) PREDICTED: TOX high mobili (553 aa) initn: 238 init1: 214 opt: 247 Z-score: 200.2 bits: 46.0 E(85289): 0.00021 Smith-Waterman score: 247; 29.2% identity (60.1% similar) in 178 aa overlap (4-172:169-342) 10 20 30 pF1KE3 MSHGPKQPGAAAAPAGGKAPGQHGGFVVTVKQE : ..: .. .: ..:. . .. ... XP_011 DAARSGVMPPAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSIN-EED 140 150 160 170 180 190 40 50 60 70 80 90 pF1KE3 RGEGPRA-GEKGSHEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRH :. :: ::: . . :: :: ::.: :: :. ::..:. :. . . :. .. XP_011 ADEANRAIGEKRAAPDSG-KKPKTPKKKKKKD--PNEPQKPVSAYALFFRDTQAAIKGQN 200 210 220 230 240 250 100 110 120 130 140 150 pF1KE3 PDLPFPEITKMLGAEWSKLQPTEKQRYLDEAEREKQQYMKELRAYQQSEAYKMCTEKIQE :. : :..:.... :..: .:: : ..: :..:.: : ::. : . : .:. . XP_011 PNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEA 260 270 280 290 300 310 160 170 180 190 200 pF1KE3 KKIKKED--------SSSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAELR . :.. . .:: :.:: :. : XP_011 QTIRSVQQTLASTNLTSSLLLNTPLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQI 320 330 340 350 360 370 >>NP_001139660 (OMIM: 611416) TOX high mobility group bo (571 aa) initn: 238 init1: 214 opt: 247 Z-score: 200.0 bits: 46.1 E(85289): 0.00021 Smith-Waterman score: 247; 29.2% identity (60.1% similar) in 178 aa overlap (4-172:187-360) 10 20 30 pF1KE3 MSHGPKQPGAAAAPAGGKAPGQHGGFVVTVKQE : ..: .. .: ..:. . .. ... NP_001 DAARSGVMPPAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSIN-EED 160 170 180 190 200 210 40 50 60 70 80 90 pF1KE3 RGEGPRA-GEKGSHEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRH :. :: ::: . . :: :: ::.: :: :. ::..:. :. . . :. .. NP_001 ADEANRAIGEKRAAPDSG-KKPKTPKKKKKKD--PNEPQKPVSAYALFFRDTQAAIKGQN 220 230 240 250 260 270 100 110 120 130 140 150 pF1KE3 PDLPFPEITKMLGAEWSKLQPTEKQRYLDEAEREKQQYMKELRAYQQSEAYKMCTEKIQE :. : :..:.... :..: .:: : ..: :..:.: : ::. : . : .:. . NP_001 PNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEA 280 290 300 310 320 330 160 170 180 190 200 pF1KE3 KKIKKED--------SSSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAELR . :.. . .:: :.:: :. : NP_001 QTIRSVQQTLASTNLTSSLLLNTPLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQI 340 350 360 370 380 390 >>XP_016878631 (OMIM: 611416) PREDICTED: TOX high mobili (572 aa) initn: 238 init1: 214 opt: 247 Z-score: 200.0 bits: 46.1 E(85289): 0.00021 Smith-Waterman score: 247; 29.2% identity (60.1% similar) in 178 aa overlap (4-172:188-361) 10 20 30 pF1KE3 MSHGPKQPGAAAAPAGGKAPGQHGGFVVTVKQE : ..: .. .: ..:. . .. ... XP_016 DAARSGVMPPAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSIN-EED 160 170 180 190 200 210 40 50 60 70 80 90 pF1KE3 RGEGPRA-GEKGSHEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRH :. :: ::: . . :: :: ::.: :: :. ::..:. :. . . :. .. XP_016 ADEANRAIGEKRAAPDSG-KKPKTPKKKKKKD--PNEPQKPVSAYALFFRDTQAAIKGQN 220 230 240 250 260 270 100 110 120 130 140 150 pF1KE3 PDLPFPEITKMLGAEWSKLQPTEKQRYLDEAEREKQQYMKELRAYQQSEAYKMCTEKIQE :. : :..:.... :..: .:: : ..: :..:.: : ::. : . : .:. . XP_016 PNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEA 280 290 300 310 320 330 160 170 180 190 200 pF1KE3 KKIKKED--------SSSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAELR . :.. . .:: :.:: :. : XP_016 QTIRSVQQTLASTNLTSSLLLNTPLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQI 340 350 360 370 380 390 >>XP_005255949 (OMIM: 611416) PREDICTED: TOX high mobili (575 aa) initn: 238 init1: 214 opt: 247 Z-score: 200.0 bits: 46.1 E(85289): 0.00021 Smith-Waterman score: 247; 29.2% identity (60.1% similar) in 178 aa overlap (4-172:191-364) 10 20 30 pF1KE3 MSHGPKQPGAAAAPAGGKAPGQHGGFVVTVKQE : ..: .. .: ..:. . .. ... XP_005 DAARSGVMPPAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPASKSATPSPSSSIN-EED 170 180 190 200 210 40 50 60 70 80 90 pF1KE3 RGEGPRA-GEKGSHEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRH :. :: ::: . . :: :: ::.: :: :. ::..:. :. . . :. .. XP_005 ADEANRAIGEKRAAPDSG-KKPKTPKKKKKKD--PNEPQKPVSAYALFFRDTQAAIKGQN 220 230 240 250 260 270 100 110 120 130 140 150 pF1KE3 PDLPFPEITKMLGAEWSKLQPTEKQRYLDEAEREKQQYMKELRAYQQSEAYKMCTEKIQE :. : :..:.... :..: .:: : ..: :..:.: : ::. : . : .:. . XP_005 PNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEA 280 290 300 310 320 330 160 170 180 190 200 pF1KE3 KKIKKED--------SSSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAELR . :.. . .:: :.:: :. : XP_005 QTIRSVQQTLASTNLTSSLLLNTPLSQHGTVSASPQTLQQSLPRSIAPKPLTMRLPMNQI 340 350 360 370 380 390 317 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 10:37:15 2016 done: Sun Nov 6 10:37:16 2016 Total Scan time: 8.340 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]