Result of FASTA (ccds) for pFN21AE1857
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1857, 378 aa
  1>>>pF1KE1857 378 - 378 aa - 378 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.6958+/-0.000799; mu= 14.7276+/- 0.048
 mean_var=71.4181+/-14.681, 0's: 0 Z-trim(106.9): 18  B-trim: 0 in 0/51
 Lambda= 0.151764
 statistics sampled from 9213 (9227) to 9213 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.664), E-opt: 0.2 (0.283), width:  16
 Scan time:  2.810

The best scores are:                                      opt bits E(32554)
CCDS45752.1 METTL2A gene_id:339175|Hs108|chr17     ( 378) 2594 577.1 8.7e-165
CCDS5803.2 METTL2B gene_id:55798|Hs108|chr7        ( 378) 2578 573.6 9.9e-164
CCDS2242.2 METTL8 gene_id:79828|Hs108|chr2         ( 407) 1328 299.9 2.6e-81
CCDS82532.1 METTL8 gene_id:79828|Hs108|chr2        ( 291)  820 188.6 5.9e-48
CCDS82531.1 METTL8 gene_id:79828|Hs108|chr2        ( 241)  716 165.8 3.6e-41
CCDS43056.1 METTL6 gene_id:131965|Hs108|chr3       ( 284)  597 139.8 2.9e-33
CCDS77706.1 METTL6 gene_id:131965|Hs108|chr3       ( 239)  425 102.1 5.4e-22


>>CCDS45752.1 METTL2A gene_id:339175|Hs108|chr17          (378 aa)
 initn: 2594 init1: 2594 opt: 2594  Z-score: 3071.9  bits: 577.1 E(32554): 8.7e-165
Smith-Waterman score: 2594; 99.7% identity (99.7% similar) in 378 aa overlap (1-378:1-378)

               10        20        30        40        50        60
pF1KE1 MAGSYPEGAPAVLADKRQQFGSRFLRDPARVFHHNAWDNVEWSEEQAAAAERKVQENSIQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MAGSYPEGAPAVLADKRQQFGSRFLRDPARVFHHNAWDNVEWSEEQAAAAERKVQENSIQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 RVCQEKQVDYEINAHKYWNDFYKIHENGFFKDRHWLFTEFPELAPSQNQNHLKDWFLENK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RVCQEKQVDYEINAHKYWNDFYKIHENGFFKDRHWLFTEFPELAPSQNQNHLKDWFLENK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 SEVPECRNNEDGPGLIMEEQHKCSSKSLEHKTQTPPVEENVTQKISDLEICADEFPGSSA
       :::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::
CCDS45 SEVPECRNNEDGPGLIMEEQHKCSSKSLEHKTQTLPVEENVTQKISDLEICADEFPGSSA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 TYRILEVGCGVGNTVFPILQTNNDPGLFVYCCDFSSTAIELVQTNSEYDPSRCFAFVHDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TYRILEVGCGVGNTVFPILQTNNDPGLFVYCCDFSSTAIELVQTNSEYDPSRCFAFVHDL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 CDEEKSYPVPKGSLDIIILIFVLSAIVPDKMQKAINRLSRLLKPGGMMLLRDYGRYDMAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 CDEEKSYPVPKGSLDIIILIFVLSAIVPDKMQKAINRLSRLLKPGGMMLLRDYGRYDMAQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 LRFKKGQCLSGNFYVRGDGTRVYFFTQEELDTLFTTAGLEKVQNLVDRRLQVNRGKQLTM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LRFKKGQCLSGNFYVRGDGTRVYFFTQEELDTLFTTAGLEKVQNLVDRRLQVNRGKQLTM
              310       320       330       340       350       360

              370        
pF1KE1 YRVWIQCKYCKPLLSSTS
       ::::::::::::::::::
CCDS45 YRVWIQCKYCKPLLSSTS
              370        

>>CCDS5803.2 METTL2B gene_id:55798|Hs108|chr7             (378 aa)
 initn: 2578 init1: 2578 opt: 2578  Z-score: 3053.0  bits: 573.6 E(32554): 9.9e-164
Smith-Waterman score: 2578; 98.7% identity (99.5% similar) in 378 aa overlap (1-378:1-378)

               10        20        30        40        50        60
pF1KE1 MAGSYPEGAPAVLADKRQQFGSRFLRDPARVFHHNAWDNVEWSEEQAAAAERKVQENSIQ
       :::::::::::.::::::::::::: ::::::::::::::::::::::::::::::::::
CCDS58 MAGSYPEGAPAILADKRQQFGSRFLSDPARVFHHNAWDNVEWSEEQAAAAERKVQENSIQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 RVCQEKQVDYEINAHKYWNDFYKIHENGFFKDRHWLFTEFPELAPSQNQNHLKDWFLENK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RVCQEKQVDYEINAHKYWNDFYKIHENGFFKDRHWLFTEFPELAPSQNQNHLKDWFLENK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 SEVPECRNNEDGPGLIMEEQHKCSSKSLEHKTQTPPVEENVTQKISDLEICADEFPGSSA
       ::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SEVCECRNNEDGPGLIMEEQHKCSSKSLEHKTQTPPVEENVTQKISDLEICADEFPGSSA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 TYRILEVGCGVGNTVFPILQTNNDPGLFVYCCDFSSTAIELVQTNSEYDPSRCFAFVHDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TYRILEVGCGVGNTVFPILQTNNDPGLFVYCCDFSSTAIELVQTNSEYDPSRCFAFVHDL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 CDEEKSYPVPKGSLDIIILIFVLSAIVPDKMQKAINRLSRLLKPGGMMLLRDYGRYDMAQ
       :::::::::::::::::::::::::.:::::::::::::::::::::.::::::::::::
CCDS58 CDEEKSYPVPKGSLDIIILIFVLSAVVPDKMQKAINRLSRLLKPGGMVLLRDYGRYDMAQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 LRFKKGQCLSGNFYVRGDGTRVYFFTQEELDTLFTTAGLEKVQNLVDRRLQVNRGKQLTM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LRFKKGQCLSGNFYVRGDGTRVYFFTQEELDTLFTTAGLEKVQNLVDRRLQVNRGKQLTM
              310       320       330       340       350       360

              370        
pF1KE1 YRVWIQCKYCKPLLSSTS
       ::::::::::::::::::
CCDS58 YRVWIQCKYCKPLLSSTS
              370        

>>CCDS2242.2 METTL8 gene_id:79828|Hs108|chr2              (407 aa)
 initn: 1317 init1: 797 opt: 1328  Z-score: 1573.3  bits: 299.9 E(32554): 2.6e-81
Smith-Waterman score: 1328; 55.4% identity (78.1% similar) in 361 aa overlap (20-373:31-390)

                          10        20        30        40         
pF1KE1            MAGSYPEGAPAVLADKRQQFGSRFLRDPARVFHHNAWDNVEWSEEQAAA
                                     .:::.: :::.::.:: ::...::.:. ::
CCDS22 MNMIWRNSISCLRLGKVPHRYQSGYHPVAPLGSRILTDPAKVFEHNMWDHMQWSKEEEAA
               10        20        30        40        50        60

      50        60        70        80        90       100         
pF1KE1 AERKVQENSIQRVCQEKQVDYEINAHKYWNDFYKIHENGFFKDRHWLFTEFPELAPSQNQ
       :..::.:::  ::  :.:: :: .: :::. :::::.: :::::.::. ::::. : ...
CCDS22 ARKKVKENSAVRVLLEEQVKYEREASKYWDTFYKIHKNKFFKDRNWLLREFPEILPVDQK
               70        80        90       100       110       120

     110           120       130       140        150       160    
pF1KE1 NHLK----DWFLENKSEVPECRNNEDGPGLIMEEQH-KCSSKSLEHKTQTPPVEENV-TQ
        . :    .:  . :. . .  .    : .  :..: . :: : : ...:     :. ..
CCDS22 PEEKARESSW-DHVKTSATNRFSRMHCPTVPDEKNHYEKSSGSSEGQSKTESDFSNLDSE
              130        140       150       160       170         

           170       180       190       200        210       220  
pF1KE1 KISDLEICADEFPGSSATYRILEVGCGVGNTVFPILQT-NNDPGLFVYCCDFSSTAIELV
       : .   . .  ::::.::.::::::::.::.:::::.: .:.:  :.:::::.: :.:::
CCDS22 KHKKGPMETGLFPGSNATFRILEVGCGAGNSVFPILNTLENSPESFLYCCDFASGAVELV
     180       190       200       210       220       230         

            230       240       250       260       270       280  
pF1KE1 QTNSEYDPSRCFAFVHDLCDEEKSYPVPKGSLDIIILIFVLSAIVPDKMQKAINRLSRLL
       ...: :  ..:::::::.::.   :: : : ::.:.:.::::.: ::.:: ..::::.::
CCDS22 KSHSSYRATQCFAFVHDVCDDGLPYPFPDGILDVILLVFVLSSIHPDRMQGVVNRLSKLL
     240       250       260       270       280       290         

            290       300       310       320       330       340  
pF1KE1 KPGGMMLLRDYGRYDMAQLRFKKGQCLSGNFYVRGDGTRVYFFTQEELDTLFTTAGLEKV
       :::::.:.::::::: .:::::::.::: ::::::::::.::::. :. ..:  :.:.. 
CCDS22 KPGGMLLFRDYGRYDKTQLRFKKGHCLSENFYVRGDGTRAYFFTKGEVHSMFCKASLDEK
     300       310       320       330       340       350         

            350       360       370                    
pF1KE1 QNLVDRRLQVNRGKQLTMYRVWIQCKYCKPLLSSTS            
       :::::::::::: ::. :.::::: :. :::                 
CCDS22 QNLVDRRLQVNRKKQVKMHRVWIQGKFQKPLHQTQNSSNMVSTLLSQD
     360       370       380       390       400       

>>CCDS82532.1 METTL8 gene_id:79828|Hs108|chr2             (291 aa)
 initn: 800 init1: 390 opt: 820  Z-score: 974.5  bits: 188.6 E(32554): 5.9e-48
Smith-Waterman score: 820; 49.2% identity (74.0% similar) in 258 aa overlap (20-270:31-287)

                          10        20        30        40         
pF1KE1            MAGSYPEGAPAVLADKRQQFGSRFLRDPARVFHHNAWDNVEWSEEQAAA
                                     .:::.: :::.::.:: ::...::.:. ::
CCDS82 MNMIWRNSISCLRLGKVPHRYQSGYHPVAPLGSRILTDPAKVFEHNMWDHMQWSKEEEAA
               10        20        30        40        50        60

      50        60        70        80        90       100         
pF1KE1 AERKVQENSIQRVCQEKQVDYEINAHKYWNDFYKIHENGFFKDRHWLFTEFPELAPSQNQ
       :..::.:::  ::  :.:: :: .: :::. :::::.: :::::.::. ::::. : ...
CCDS82 ARKKVKENSAVRVLLEEQVKYEREASKYWDTFYKIHKNKFFKDRNWLLREFPEILPVDQK
               70        80        90       100       110       120

     110           120       130       140        150       160    
pF1KE1 NHLK----DWFLENKSEVPECRNNEDGPGLIMEEQH-KCSSKSLEHKTQTPPVEENV-TQ
        . :    .:  . :. . .  .    : .  :..: . :: : : ...:     :. ..
CCDS82 PEEKARESSW-DHVKTSATNRFSRMHCPTVPDEKNHYEKSSGSSEGQSKTESDFSNLDSE
              130        140       150       160       170         

           170       180       190       200        210       220  
pF1KE1 KISDLEICADEFPGSSATYRILEVGCGVGNTVFPILQT-NNDPGLFVYCCDFSSTAIELV
       : .   . .  ::::.::.::::::::.::.:::::.: .:.:  :.:::::.: :.:::
CCDS82 KHKKGPMETGLFPGSNATFRILEVGCGAGNSVFPILNTLENSPESFLYCCDFASGAVELV
     180       190       200       210       220       230         

            230       240       250       260       270       280  
pF1KE1 QTNSEYDPSRCFAFVHDLCDEEKSYPVPKGSLDIIILIFVLSAIVPDKMQKAINRLSRLL
       ...: :  ..:::::::.::.   :: : : ::.:.:.::::.: ::.            
CCDS82 KSHSSYRATQCFAFVHDVCDDGLPYPFPDGILDVILLVFVLSSIHPDRTLFI        
     240       250       260       270       280       290         

            290       300       310       320       330       340  
pF1KE1 KPGGMMLLRDYGRYDMAQLRFKKGQCLSGNFYVRGDGTRVYFFTQEELDTLFTTAGLEKV

>>CCDS82531.1 METTL8 gene_id:79828|Hs108|chr2             (241 aa)
 initn: 694 init1: 284 opt: 716  Z-score: 852.7  bits: 165.8 E(32554): 3.6e-41
Smith-Waterman score: 716; 47.9% identity (72.7% similar) in 238 aa overlap (40-270:1-237)

      10        20        30        40        50        60         
pF1KE1 PAVLADKRQQFGSRFLRDPARVFHHNAWDNVEWSEEQAAAAERKVQENSIQRVCQEKQVD
                                     ..::.:. :::..::.:::  ::  :.:: 
CCDS82                               MQWSKEEEAAARKKVKENSAVRVLLEEQVK
                                             10        20        30

      70        80        90       100       110           120     
pF1KE1 YEINAHKYWNDFYKIHENGFFKDRHWLFTEFPELAPSQNQNHLK----DWFLENKSEVPE
       :: .: :::. :::::.: :::::.::. ::::. : ... . :    .:  . :. . .
CCDS82 YEREASKYWDTFYKIHKNKFFKDRNWLLREFPEILPVDQKPEEKARESSW-DHVKTSATN
               40        50        60        70        80          

         130       140        150       160        170       180   
pF1KE1 CRNNEDGPGLIMEEQH-KCSSKSLEHKTQTPPVEENV-TQKISDLEICADEFPGSSATYR
         .    : .  :..: . :: : : ...:     :. ..: .   . .  ::::.::.:
CCDS82 RFSRMHCPTVPDEKNHYEKSSGSSEGQSKTESDFSNLDSEKHKKGPMETGLFPGSNATFR
      90       100       110       120       130       140         

           190       200        210       220       230       240  
pF1KE1 ILEVGCGVGNTVFPILQT-NNDPGLFVYCCDFSSTAIELVQTNSEYDPSRCFAFVHDLCD
       :::::::.::.:::::.: .:.:  :.:::::.: :.:::...: :  ..:::::::.::
CCDS82 ILEVGCGAGNSVFPILNTLENSPESFLYCCDFASGAVELVKSHSSYRATQCFAFVHDVCD
     150       160       170       180       190       200         

            250       260       270       280       290       300  
pF1KE1 EEKSYPVPKGSLDIIILIFVLSAIVPDKMQKAINRLSRLLKPGGMMLLRDYGRYDMAQLR
       .   :: : : ::.:.:.::::.: ::.                                
CCDS82 DGLPYPFPDGILDVILLVFVLSSIHPDRTLFI                            
     210       220       230       240                             

>>CCDS43056.1 METTL6 gene_id:131965|Hs108|chr3            (284 aa)
 initn: 633 init1: 512 opt: 597  Z-score: 710.8  bits: 139.8 E(32554): 2.9e-33
Smith-Waterman score: 603; 38.2% identity (56.2% similar) in 322 aa overlap (51-372:19-269)

               30        40        50        60        70        80
pF1KE1 GSRFLRDPARVFHHNAWDNVEWSEEQAAAAERKVQENSIQRVCQEKQVDYEINAHKYWND
                                     :.:.....   : . ::   : .:.: :. 
CCDS43             MASLQRKGLQARILTSEEEEKLKRDQTL-VSDFKQQKLEQEAQKNWDL
                           10        20         30        40       

               90       100       110       120       130       140
pF1KE1 FYKIHENGFFKDRHWLFTEFPELAPSQNQNHLKDWFLENKSEVPECRNNEDGPGLIMEEQ
       ::: . ..:::::::   :: ::                .:    ::. ::         
CCDS43 FYKRNSTNFFKDRHWTTREFEEL----------------RS----CREFED---------
        50        60        70                                     

              150       160       170       180       190       200
pF1KE1 HKCSSKSLEHKTQTPPVEENVTQKISDLEICADEFPGSSATYRILEVGCGVGNTVFPILQ
                             ::..                 .::.:::::: .::.:.
CCDS43 ----------------------QKLT-----------------MLEAGCGVGNCLFPLLE
                             80                         90         

              210       220       230       240       250       260
pF1KE1 TNNDPGLFVYCCDFSSTAIELVQTNSEYDPSRCFAFVHDLCDEEKSYPVPKGSLDIIILI
         .::..:.: ::::  ::: :. :  ::  :: .:  ::  ..    ::  :.:...::
CCDS43 --EDPNIFAYACDFSPRAIEYVKQNPLYDTERCKVFQCDLTKDDLLDHVPPESVDVVMLI
       100       110       120       130       140       150       

              270       280       290       300       310       320
pF1KE1 FVLSAIVPDKMQKAINRLSRLLKPGGMMLLRDYGRYDMAQLRFKKGQCLSGNFYVRGDGT
       :::::. ::::. ... . ..::::  .:.:::: :: :.:::: .. :. ::::: :::
CCDS43 FVLSAVHPDKMHLVLQNIYKVLKPGKSVLFRDYGLYDHAMLRFKASSKLGENFYVRQDGT
       160       170       180       190       200       210       

              330       340       350       360       370          
pF1KE1 RVYFFTQEELDTLFTTAGLEKVQNLVDRRLQVNRGKQLTMYRVWIQCKYCKPLLSSTS  
       : ::::.. :  ::  .: :.: :    :  ::. . : . ::..: :. ::        
CCDS43 RSYFFTDDFLAQLFMDTGYEEVVNEYVFRETVNKKEGLCVPRVFLQSKFLKPPKNPSPVV
       220       230       240       250       260       270       

CCDS43 LGLDPKS
       280    

>>CCDS77706.1 METTL6 gene_id:131965|Hs108|chr3            (239 aa)
 initn: 425 init1: 425 opt: 425  Z-score: 508.4  bits: 102.1 E(32554): 5.4e-22
Smith-Waterman score: 425; 46.7% identity (68.0% similar) in 150 aa overlap (223-372:75-224)

            200       210       220       230       240       250  
pF1KE1 NTVFPILQTNNDPGLFVYCCDFSSTAIELVQTNSEYDPSRCFAFVHDLCDEEKSYPVPKG
                                     . :  ::  :: .:  ::  ..    ::  
CCDS77 WDLFYKRNSTNFFKDRHWTTREFEELRSCREQNPLYDTERCKVFQCDLTKDDLLDHVPPE
           50        60        70        80        90       100    

            260       270       280       290       300       310  
pF1KE1 SLDIIILIFVLSAIVPDKMQKAINRLSRLLKPGGMMLLRDYGRYDMAQLRFKKGQCLSGN
       :.:...:::::::. ::::. ... . ..::::  .:.:::: :: :.:::: .. :. :
CCDS77 SVDVVMLIFVLSAVHPDKMHLVLQNIYKVLKPGKSVLFRDYGLYDHAMLRFKASSKLGEN
          110       120       130       140       150       160    

            320       330       340       350       360       370  
pF1KE1 FYVRGDGTRVYFFTQEELDTLFTTAGLEKVQNLVDRRLQVNRGKQLTMYRVWIQCKYCKP
       :::: :::: ::::.. :  ::  .: :.: :    :  ::. . : . ::..: :. ::
CCDS77 FYVRQDGTRSYFFTDDFLAQLFMDTGYEEVVNEYVFRETVNKKEGLCVPRVFLQSKFLKP
          170       180       190       200       210       220    

                      
pF1KE1 LLSSTS         
                      
CCDS77 PKNPSPVVLGLDPKS
          230         




378 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 10:38:38 2016 done: Sun Nov  6 10:38:38 2016
 Total Scan time:  2.810 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com