FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9681, 121 aa 1>>>pF1KE9681 121 - 121 aa - 121 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1529+/-0.000879; mu= 6.6712+/- 0.053 mean_var=84.1153+/-16.859, 0's: 0 Z-trim(107.0): 23 B-trim: 0 in 0/53 Lambda= 0.139842 statistics sampled from 9301 (9304) to 9301 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.286), width: 16 Scan time: 1.390 The best scores are: opt bits E(32554) CCDS45747.1 SKA2 gene_id:348235|Hs108|chr17 ( 121) 763 163.1 3.8e-41 CCDS82175.1 SKA2 gene_id:348235|Hs108|chr17 ( 109) 620 134.2 1.7e-32 >>CCDS45747.1 SKA2 gene_id:348235|Hs108|chr17 (121 aa) initn: 763 init1: 763 opt: 763 Z-score: 852.2 bits: 163.1 E(32554): 3.8e-41 Smith-Waterman score: 763; 100.0% identity (100.0% similar) in 121 aa overlap (1-121:1-121) 10 20 30 40 50 60 pF1KE9 MEAEVDKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSVIKSRYQTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MEAEVDKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSVIKSRYQTL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 YARFKPVAVEQKESKSRICATVKKTMNMIQKLQKQTDLELSPLTKEEKTAAEQFKFHMPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 YARFKPVAVEQKESKSRICATVKKTMNMIQKLQKQTDLELSPLTKEEKTAAEQFKFHMPD 70 80 90 100 110 120 pF1KE9 L : CCDS45 L >>CCDS82175.1 SKA2 gene_id:348235|Hs108|chr17 (109 aa) initn: 620 init1: 620 opt: 620 Z-score: 697.0 bits: 134.2 E(32554): 1.7e-32 Smith-Waterman score: 620; 99.0% identity (100.0% similar) in 100 aa overlap (1-100:1-100) 10 20 30 40 50 60 pF1KE9 MEAEVDKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSVIKSRYQTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MEAEVDKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSVIKSRYQTL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 YARFKPVAVEQKESKSRICATVKKTMNMIQKLQKQTDLELSPLTKEEKTAAEQFKFHMPD :::::::::::::::::::::::::::::::::::::::. CCDS82 YARFKPVAVEQKESKSRICATVKKTMNMIQKLQKQTDLEVMLSVDSCHH 70 80 90 100 pF1KE9 L 121 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:30:34 2016 done: Tue Nov 8 10:30:34 2016 Total Scan time: 1.390 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]