FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4072, 379 aa 1>>>pF1KE4072 379 - 379 aa - 379 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 12.8208+/-0.00103; mu= -13.1091+/- 0.062 mean_var=608.1524+/-124.573, 0's: 0 Z-trim(119.2): 18 B-trim: 204 in 1/54 Lambda= 0.052008 statistics sampled from 20335 (20351) to 20335 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.853), E-opt: 0.2 (0.625), width: 16 Scan time: 3.910 The best scores are: opt bits E(32554) CCDS45661.1 C17orf96 gene_id:100170841|Hs108|chr17 ( 379) 2772 221.9 7.4e-58 >>CCDS45661.1 C17orf96 gene_id:100170841|Hs108|chr17 (379 aa) initn: 2772 init1: 2772 opt: 2772 Z-score: 1152.2 bits: 221.9 E(32554): 7.4e-58 Smith-Waterman score: 2772; 99.7% identity (99.7% similar) in 379 aa overlap (1-379:1-379) 10 20 30 40 50 60 pF1KE4 METLCPAPRLAVPASPRGSPCSPTPRKPCRGTQEFSPLCLRALAFCALAKPRASSLGPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 METLCPAPRLAVPASPRGSPCSPTPRKPCRGTQEFSPLCLRALAFCALAKPRASSLGPGP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 GELAARSPVLRGPQAPLRPGGWAPDGLKHLWAPTGRLGVPNTAAGEDADVAACPRRGEEE :::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::: CCDS45 GELAARSPVLRGPQAPLRPGGWAPDGLKHLWAPTGRPGVPNTAAGEDADVAACPRRGEEE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 EGGGGFPHFGVRSCAPPGRCPAPPHPRESTTSFASAPPRPAPGLEPQRGPAASPPQEPSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 EGGGGFPHFGVRSCAPPGRCPAPPHPRESTTSFASAPPRPAPGLEPQRGPAASPPQEPSS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 RPPSPPAGLSTEPAGPGTAPRPFLPGQPAEVDGNPPPAAPEAPAASPSTASPAPAAPGDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 RPPSPPAGLSTEPAGPGTAPRPFLPGQPAEVDGNPPPAAPEAPAASPSTASPAPAAPGDL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 RQEHFDRLIRRSKLWCYAKGFALDTPSLRRGPERPPAKGPARGAAKKRRLPAPPPRTAQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 RQEHFDRLIRRSKLWCYAKGFALDTPSLRRGPERPPAKGPARGAAKKRRLPAPPPRTAQP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 RRPAPTLPTTSTFSLLNCFPCPPALVVGEDGDLKPASSLRLQGDSKPPPAHPLWRWQMGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 RRPAPTLPTTSTFSLLNCFPCPPALVVGEDGDLKPASSLRLQGDSKPPPAHPLWRWQMGG 310 320 330 340 350 360 370 pF1KE4 PAVPEPPGLKFWGINMDES ::::::::::::::::::: CCDS45 PAVPEPPGLKFWGINMDES 370 379 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:13:46 2016 done: Sun Nov 6 04:13:47 2016 Total Scan time: 3.910 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]