FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0761, 337 aa 1>>>pF1KE0761 337 - 337 aa - 337 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3977+/-0.000758; mu= 12.6128+/- 0.046 mean_var=136.4288+/-26.334, 0's: 0 Z-trim(113.1): 102 B-trim: 53 in 1/53 Lambda= 0.109805 statistics sampled from 13626 (13755) to 13626 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.766), E-opt: 0.2 (0.423), width: 16 Scan time: 2.700 The best scores are: opt bits E(32554) CCDS45382.1 SLC9A3R2 gene_id:9351|Hs108|chr16 ( 337) 2305 376.1 2.2e-104 CCDS45383.1 SLC9A3R2 gene_id:9351|Hs108|chr16 ( 326) 1949 319.7 2e-87 CCDS58407.1 SLC9A3R2 gene_id:9351|Hs108|chr16 ( 226) 1362 226.6 1.6e-59 CCDS11705.1 SLC9A3R1 gene_id:9368|Hs108|chr17 ( 358) 999 169.3 4.4e-42 CCDS8417.1 PDZD3 gene_id:79849|Hs108|chr11 ( 491) 345 65.8 8.5e-11 CCDS53719.1 PDZD3 gene_id:79849|Hs108|chr11 ( 505) 345 65.8 8.6e-11 >>CCDS45382.1 SLC9A3R2 gene_id:9351|Hs108|chr16 (337 aa) initn: 2305 init1: 2305 opt: 2305 Z-score: 1987.5 bits: 376.1 E(32554): 2.2e-104 Smith-Waterman score: 2305; 100.0% identity (100.0% similar) in 337 aa overlap (1-337:1-337) 10 20 30 40 50 60 pF1KE0 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 GVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEMAQRGLPPAHDPWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEMAQRGLPPAHDPWE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 PKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 PGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSRSDLPGSDKDTEDGSAWKQDPFQESGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSRSDLPGSDKDTEDGSAWKQDPFQESGL 250 260 270 280 290 300 310 320 330 pF1KE0 HLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFSNF ::::::::::::::::::::::::::::::::::::: CCDS45 HLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFSNF 310 320 330 >>CCDS45383.1 SLC9A3R2 gene_id:9351|Hs108|chr16 (326 aa) initn: 2353 init1: 1948 opt: 1949 Z-score: 1682.8 bits: 319.7 E(32554): 2e-87 Smith-Waterman score: 2186; 96.7% identity (96.7% similar) in 337 aa overlap (1-337:1-326) 10 20 30 40 50 60 pF1KE0 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 GVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEMAQRGLPPAHDPWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEMAQRGLPPAHDPWE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 PKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 PGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSRSDLPGSDKDTEDGSAWKQDPFQESGL ::::::::::::::::::::::::::::::::::::::::::::: :::: CCDS45 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSRSDLPGSDKDTE-----------ESGL 250 260 270 280 310 320 330 pF1KE0 HLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFSNF ::::::::::::::::::::::::::::::::::::: CCDS45 HLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFSNF 290 300 310 320 >>CCDS58407.1 SLC9A3R2 gene_id:9351|Hs108|chr16 (226 aa) initn: 1353 init1: 1353 opt: 1362 Z-score: 1182.3 bits: 226.6 E(32554): 1.6e-59 Smith-Waterman score: 1362; 89.3% identity (91.0% similar) in 233 aa overlap (107-337:1-226) 80 90 100 110 120 130 pF1KE0 KAVEGQTRLLVVDQETDEELRRRQLTCTEEMAQRG--LPPAHDPWEPKPDWAHTGSHSSE ::. : :::. : : : . CCDS58 MARSGSATPPARAPGAP-P------RSPPQ 10 20 140 150 160 170 180 190 pF1KE0 AGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQD .:::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 RLVQDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQD 30 40 50 60 70 80 200 210 220 230 240 250 pF1KE0 RLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLRVTPTEEHVEGPLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 RLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLRVTPTEEHVEGPLPS 90 100 110 120 130 140 260 270 280 290 300 310 pF1KE0 PVTNGTSPAQLNGGSACSSRSDLPGSDKDTEDGSAWKQDPFQESGLHLSPTAAEAKEKAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 PVTNGTSPAQLNGGSACSSRSDLPGSDKDTEDGSAWKQDPFQESGLHLSPTAAEAKEKAR 150 160 170 180 190 200 320 330 pF1KE0 AMRVNKRAPQMDWNRKREIFSNF ::::::::::::::::::::::: CCDS58 AMRVNKRAPQMDWNRKREIFSNF 210 220 >>CCDS11705.1 SLC9A3R1 gene_id:9368|Hs108|chr17 (358 aa) initn: 1083 init1: 966 opt: 999 Z-score: 869.0 bits: 169.3 E(32554): 4.4e-42 Smith-Waterman score: 1104; 52.1% identity (72.0% similar) in 361 aa overlap (2-337:6-358) 10 20 30 40 50 pF1KE0 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRL :: :: :::: : .: .:::::::::::. ::.:: :::::::: :.: ::::: CCDS11 MSADAAAGAPL-PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRL 10 20 30 40 50 60 70 80 90 100 110 pF1KE0 VEVNGVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEM--AQRGLPP ::::: ::: :::.:::.::.:. . .:::::: ::::.:.. . ::. ::.. : CCDS11 VEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQKLGVQVREELLRAQEA-PG 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE0 AHDPWEPKPDWAHTGSHSSEAGKKDVSGP-LRELRPRLCHLRKGPQGYGFNLHSDKSRPG .: : .. ... .: . : : : :::::::: ..:::.:::::::::::.:: CCDS11 QAEP--PAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKGPSGYGFNLHSDKSKPG 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE0 QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETD :.:::::: ::: ::::::::..:::: .:: .:..::..:.: ::..::::: ::: CCDS11 QFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETD 180 190 200 210 220 230 240 250 260 270 pF1KE0 EHFKRLRVTPTEEHVEGPLPSPVTNGT------------------SPAQLNGGSACSSR- : ::. :: :..::..:::: : ::: :: . ..:. .:. CCDS11 EFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESPRPALVRSASSDTSEE 240 250 260 270 280 290 280 290 300 310 320 330 pF1KE0 ---SDLPGSDKDTEDGSAWKQDPFQESGLHLSPTAAEAKEKARAMRVNKRAPQMDWNRKR .: : .. .: .:. ..::. : .. . : :::.:. : .::::::::..: CCDS11 LNSQDSPPKQDSTAPSSTSSSDPI----LDFNISLAMAKERAHQKRSSKRAPQMDWSKKN 300 310 320 330 340 350 pF1KE0 EIFSNF :.:::. CCDS11 ELFSNL >>CCDS8417.1 PDZD3 gene_id:79849|Hs108|chr11 (491 aa) initn: 584 init1: 247 opt: 345 Z-score: 307.3 bits: 65.8 E(32554): 8.5e-11 Smith-Waterman score: 440; 37.1% identity (57.2% similar) in 264 aa overlap (7-265:153-365) 10 20 30 pF1KE0 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFI .:::::..:. : :.:: . .: .: : CCDS84 LLTVLARHAHDVARAQLGEDAHLCPTLGPGVRPRLCHIVKDEGGFGFSV--THGNQGPFW 130 140 150 160 170 180 40 50 60 70 80 90 pF1KE0 RRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEEL . :. :: :.. : ::.::::. :. :. :::. :..:. CCDS84 LVLSTGGAAERAGVPPGARLLEVNGLWQSGQ--------------QVTLLVAGPEVEEQC 190 200 210 220 100 110 120 130 140 150 pF1KE0 RRRQLTCTEEMAQRGLPPAHDPWEPKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRK : : ::: : : :: : . :: ::.: CCDS84 R-----------QLGLPLAAPLAE---GWAL---------------PTK---PRCLHLEK 230 240 250 160 170 180 190 200 210 pF1KE0 GPQGYGFNLHSDKS---RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVV ::::.:: :. .:. ::::.. :::: :: ..:..: :::. : :..:::: : :.: CCDS84 GPQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETV 260 270 280 290 300 310 220 230 240 250 260 270 pF1KE0 ASIKAREDEARLLVVDPETDEHFKRLRVTPTE--EHVEGPLPSPVTNGTSPAQLNGGSAC . :... . . : :::::.:. :. .:..: :..:.: :: :.: :.: CCDS84 SRIQGQGSCVSLTVVDPEADRFFSMVRLSPLLFLENTEAP-ASP--RGSSSASLVETEDP 320 330 340 350 360 370 280 290 300 310 320 330 pF1KE0 SSRSDLPGSDKDTEDGSAWKQDPFQESGLHLSPTAAEAKEKARAMRVNKRAPQMDWNRKR CCDS84 SLEDTSVPSVPLGSRQCFLYPGPGGSYGFRLSCVASGPRLFISQVTPGGSAARAGLQVGD 380 390 400 410 420 430 >>CCDS53719.1 PDZD3 gene_id:79849|Hs108|chr11 (505 aa) initn: 727 init1: 247 opt: 345 Z-score: 307.2 bits: 65.8 E(32554): 8.6e-11 Smith-Waterman score: 506; 39.0% identity (61.0% similar) in 264 aa overlap (7-265:153-379) 10 20 30 pF1KE0 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFI .:::::..:. : :.:: . .: .: : CCDS53 LLTVLARHAHDVARAQLGEDAHLCPTLGPGVRPRLCHIVKDEGGFGFSV--THGNQGPFW 130 140 150 160 170 180 40 50 60 70 80 90 pF1KE0 RRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEEL . :. :: :.. : ::.:::::.:: ::.:..... :. :::. :..:. CCDS53 LVLSTGGAAERAGVPPGARLLEVNGVSVEKFTHNQLTRKLWQSGQQVTLLVAGPEVEEQC 190 200 210 220 230 240 100 110 120 130 140 150 pF1KE0 RRRQLTCTEEMAQRGLPPAHDPWEPKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRK : : ::: : : :: : . :: ::.: CCDS53 R-----------QLGLPLAAPLAE---GWAL---------------PTK---PRCLHLEK 250 260 160 170 180 190 200 210 pF1KE0 GPQGYGFNLHSDKS---RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVV ::::.:: :. .:. ::::.. :::: :: ..:..: :::. : :..:::: : :.: CCDS53 GPQGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETV 270 280 290 300 310 320 220 230 240 250 260 270 pF1KE0 ASIKAREDEARLLVVDPETDEHFKRLRVTPTE--EHVEGPLPSPVTNGTSPAQLNGGSAC . :... . . : :::::.:. :. .:..: :..:.: :: :.: :.: CCDS53 SRIQGQGSCVSLTVVDPEADRFFSMVRLSPLLFLENTEAP-ASP--RGSSSASLVETEDP 330 340 350 360 370 380 280 290 300 310 320 330 pF1KE0 SSRSDLPGSDKDTEDGSAWKQDPFQESGLHLSPTAAEAKEKARAMRVNKRAPQMDWNRKR CCDS53 SLEDTSVPSVPLGSRQCFLYPGPGGSYGFRLSCVASGPRLFISQVTPGGSAARAGLQVGD 390 400 410 420 430 440 337 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 10:40:04 2016 done: Sun Nov 6 10:40:05 2016 Total Scan time: 2.700 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]