FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2227, 389 aa 1>>>pF1KE2227 389 - 389 aa - 389 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6173+/-0.000738; mu= 15.2825+/- 0.044 mean_var=65.3329+/-13.376, 0's: 0 Z-trim(109.5): 15 B-trim: 395 in 1/50 Lambda= 0.158675 statistics sampled from 10914 (10920) to 10914 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.713), E-opt: 0.2 (0.335), width: 16 Scan time: 2.930 The best scores are: opt bits E(32554) CCDS45280.1 MTFMT gene_id:123263|Hs108|chr15 ( 389) 2646 614.2 6.4e-176 >>CCDS45280.1 MTFMT gene_id:123263|Hs108|chr15 (389 aa) initn: 2646 init1: 2646 opt: 2646 Z-score: 3271.8 bits: 614.2 E(32554): 6.4e-176 Smith-Waterman score: 2646; 100.0% identity (100.0% similar) in 389 aa overlap (1-389:1-389) 10 20 30 40 50 60 pF1KE2 MRVLVRRCWGPPLAHGARRGRPSPQWRALARLGWEDCRDSRVREKPPWRVLFFGTDQFAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MRVLVRRCWGPPLAHGARRGRPSPQWRALARLGWEDCRDSRVREKPPWRVLFFGTDQFAR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 EALRALHAARENKEEELIDKLEVVTMPSPSPKGLPVKQYAVQSQLPVYEWPDVGSGEYDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 EALRALHAARENKEEELIDKLEVVTMPSPSPKGLPVKQYAVQSQLPVYEWPDVGSGEYDV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 GVVASFGRLLNEALILKFPYGILNVHPSCLPRWRGPAPVIHTVLHGDTVTGVTIMQIRPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GVVASFGRLLNEALILKFPYGILNVHPSCLPRWRGPAPVIHTVLHGDTVTGVTIMQIRPK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 RFDVGPILKQETVPVPPKSTAKELEAVLSRLGANMLISVLKNLPESLSNGRQQPMEGATY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 RFDVGPILKQETVPVPPKSTAKELEAVLSRLGANMLISVLKNLPESLSNGRQQPMEGATY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 APKISAGTSCIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLLDLVEVNSSVLADPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 APKISAGTSCIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLLDLVEVNSSVLADPK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 LTGQALIPGSVIYHKQSQILLVYCKDGWIGVRSVMLKKSLTATDFYNGYLHPWYQKNSQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LTGQALIPGSVIYHKQSQILLVYCKDGWIGVRSVMLKKSLTATDFYNGYLHPWYQKNSQA 310 320 330 340 350 360 370 380 pF1KE2 QPSQCRFQTLRLPTKKKQKKTVAMQQCIE ::::::::::::::::::::::::::::: CCDS45 QPSQCRFQTLRLPTKKKQKKTVAMQQCIE 370 380 389 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 10:42:14 2016 done: Sun Nov 6 10:42:15 2016 Total Scan time: 2.930 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]