FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6587, 175 aa 1>>>pF1KE6587 175 - 175 aa - 175 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.7618+/-0.000599; mu= 7.4794+/- 0.036 mean_var=116.4511+/-23.224, 0's: 0 Z-trim(116.5): 3 B-trim: 0 in 0/54 Lambda= 0.118851 statistics sampled from 17178 (17179) to 17178 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.849), E-opt: 0.2 (0.528), width: 16 Scan time: 1.800 The best scores are: opt bits E(32554) CCDS45229.1 C15orf62 gene_id:643338|Hs108|chr15 ( 175) 1185 212.6 1e-55 >>CCDS45229.1 C15orf62 gene_id:643338|Hs108|chr15 (175 aa) initn: 1185 init1: 1185 opt: 1185 Z-score: 1113.8 bits: 212.6 E(32554): 1e-55 Smith-Waterman score: 1185; 100.0% identity (100.0% similar) in 175 aa overlap (1-175:1-175) 10 20 30 40 50 60 pF1KE6 METWRKGSFRNASFFKQLSLGRPRRLRRQSSVLSQASTAGGDHEEYSNREVIRELQGRPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 METWRKGSFRNASFFKQLSLGRPRRLRRQSSVLSQASTAGGDHEEYSNREVIRELQGRPD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GRRLPLWGDEQPRATLLAPPKPPRLYRESSSCPNILEPPPAYTAAYSATLPSALSLSSAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 GRRLPLWGDEQPRATLLAPPKPPRLYRESSSCPNILEPPPAYTAAYSATLPSALSLSSAL 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 HQHSEKGLVDTPCFQRTPTPDLSDPFLSFKVDLGISLLEEVLQMLREQFPSEPSF ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 HQHSEKGLVDTPCFQRTPTPDLSDPFLSFKVDLGISLLEEVLQMLREQFPSEPSF 130 140 150 160 170 175 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:36:37 2016 done: Tue Nov 8 14:36:37 2016 Total Scan time: 1.800 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]