FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5233, 198 aa 1>>>pF1KE5233 198 - 198 aa - 198 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5619+/-0.000697; mu= 13.2703+/- 0.042 mean_var=81.2378+/-15.925, 0's: 0 Z-trim(110.8): 5 B-trim: 537 in 1/52 Lambda= 0.142297 statistics sampled from 11916 (11918) to 11916 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.74), E-opt: 0.2 (0.366), width: 16 Scan time: 2.100 The best scores are: opt bits E(32554) CCDS45003.1 DENR gene_id:8562|Hs108|chr12 ( 198) 1334 282.6 1.1e-76 >>CCDS45003.1 DENR gene_id:8562|Hs108|chr12 (198 aa) initn: 1334 init1: 1334 opt: 1334 Z-score: 1490.5 bits: 282.6 E(32554): 1.1e-76 Smith-Waterman score: 1334; 100.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198) 10 20 30 40 50 60 pF1KE5 MAADISESSGADCKGDPRNSAKLDADYPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MAADISESSGADCKGDPRNSAKLDADYPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FPNEFAKLTVENSPKQEAGISEGQGTAGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 FPNEFAKLTVENSPKQEAGISEGQGTAGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 PRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 PRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQE 130 140 150 160 170 180 190 pF1KE5 KWPEVDDDSIEDLGEVKK :::::::::::::::::: CCDS45 KWPEVDDDSIEDLGEVKK 190 198 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:44:31 2016 done: Mon Nov 7 22:44:31 2016 Total Scan time: 2.100 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]