FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2376, 517 aa 1>>>pF1KE2376 517 - 517 aa - 517 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.2420+/-0.000931; mu= -5.5040+/- 0.056 mean_var=459.5970+/-101.419, 0's: 0 Z-trim(116.9): 27 B-trim: 0 in 0/54 Lambda= 0.059825 statistics sampled from 17568 (17586) to 17568 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.806), E-opt: 0.2 (0.54), width: 16 Scan time: 4.370 The best scores are: opt bits E(32554) CCDS44841.1 AEBP2 gene_id:121536|Hs108|chr12 ( 517) 3453 312.2 9.1e-85 CCDS44842.1 AEBP2 gene_id:121536|Hs108|chr12 ( 503) 3369 304.9 1.4e-82 CCDS58215.1 AEBP2 gene_id:121536|Hs108|chr12 ( 301) 2006 187.0 2.5e-47 >>CCDS44841.1 AEBP2 gene_id:121536|Hs108|chr12 (517 aa) initn: 3453 init1: 3453 opt: 3453 Z-score: 1635.3 bits: 312.2 E(32554): 9.1e-85 Smith-Waterman score: 3453; 100.0% identity (100.0% similar) in 517 aa overlap (1-517:1-517) 10 20 30 40 50 60 pF1KE2 MAAAITDMADLEELSRLSPLPPGSPGSAARGRAEPPEEEEEEEEEEEEAEAEAVAALLLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MAAAITDMADLEELSRLSPLPPGSPGSAARGRAEPPEEEEEEEEEEEEAEAEAVAALLLN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 GGSGGGGGGGGGGVGGGEAETMSEPSPESASQAGEDEDEEEDDEEEEDESSSSGGGEEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 GGSGGGGGGGGGGVGGGEAETMSEPSPESASQAGEDEDEEEDDEEEEDESSSSGGGEEES 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 SAESLVGSSGGSSSDETRSLSPGAASSSSGDGDGKEGLEEPKGPRGSQGGGGGGSSSSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SAESLVGSSGGSSSDETRSLSPGAASSSSGDGDGKEGLEEPKGPRGSQGGGGGGSSSSSV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 VSSGGDEGYGTGGGGSSATSGGRRGSLEMSSDGEPLSRMDSEDSISSTIMDVDSTISSGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 VSSGGDEGYGTGGGGSSATSGGRRGSLEMSSDGEPLSRMDSEDSISSTIMDVDSTISSGR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 STPAMMNGQGSTTSSSKNIAYNCCWDQCQACFNSSPDLADHIRSIHVDGQRGGVFVCLWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 STPAMMNGQGSTTSSSKNIAYNCCWDQCQACFNSSPDLADHIRSIHVDGQRGGVFVCLWK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 GCKVYNTPSTSQSWLQRHMLTHSGDKPFKCVVGGCNASFASQGGLARHVPTHFSQQNSSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 GCKVYNTPSTSQSWLQRHMLTHSGDKPFKCVVGGCNASFASQGGLARHVPTHFSQQNSSK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 VSSQPKAKEESPSKAGMNKRRKLKNKRRRSLPRPHDFFDAQTLDAIRHRAICFNLSAHIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 VSSQPKAKEESPSKAGMNKRRKLKNKRRRSLPRPHDFFDAQTLDAIRHRAICFNLSAHIE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 SLGKGHSVVFHSTVIAKRKEDSGKIKLLLHWMPEDILPDVWVNESERHQLKTKVVHLSKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SLGKGHSVVFHSTVIAKRKEDSGKIKLLLHWMPEDILPDVWVNESERHQLKTKVVHLSKL 430 440 450 460 470 480 490 500 510 pF1KE2 PKDTALLLDPNIYRTMPQKRLKRTLIRKVFNLYLSKQ ::::::::::::::::::::::::::::::::::::: CCDS44 PKDTALLLDPNIYRTMPQKRLKRTLIRKVFNLYLSKQ 490 500 510 >>CCDS44842.1 AEBP2 gene_id:121536|Hs108|chr12 (503 aa) initn: 3369 init1: 3369 opt: 3369 Z-score: 1596.2 bits: 304.9 E(32554): 1.4e-82 Smith-Waterman score: 3369; 100.0% identity (100.0% similar) in 503 aa overlap (1-503:1-503) 10 20 30 40 50 60 pF1KE2 MAAAITDMADLEELSRLSPLPPGSPGSAARGRAEPPEEEEEEEEEEEEAEAEAVAALLLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MAAAITDMADLEELSRLSPLPPGSPGSAARGRAEPPEEEEEEEEEEEEAEAEAVAALLLN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 GGSGGGGGGGGGGVGGGEAETMSEPSPESASQAGEDEDEEEDDEEEEDESSSSGGGEEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 GGSGGGGGGGGGGVGGGEAETMSEPSPESASQAGEDEDEEEDDEEEEDESSSSGGGEEES 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 SAESLVGSSGGSSSDETRSLSPGAASSSSGDGDGKEGLEEPKGPRGSQGGGGGGSSSSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SAESLVGSSGGSSSDETRSLSPGAASSSSGDGDGKEGLEEPKGPRGSQGGGGGGSSSSSV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 VSSGGDEGYGTGGGGSSATSGGRRGSLEMSSDGEPLSRMDSEDSISSTIMDVDSTISSGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 VSSGGDEGYGTGGGGSSATSGGRRGSLEMSSDGEPLSRMDSEDSISSTIMDVDSTISSGR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 STPAMMNGQGSTTSSSKNIAYNCCWDQCQACFNSSPDLADHIRSIHVDGQRGGVFVCLWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 STPAMMNGQGSTTSSSKNIAYNCCWDQCQACFNSSPDLADHIRSIHVDGQRGGVFVCLWK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 GCKVYNTPSTSQSWLQRHMLTHSGDKPFKCVVGGCNASFASQGGLARHVPTHFSQQNSSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 GCKVYNTPSTSQSWLQRHMLTHSGDKPFKCVVGGCNASFASQGGLARHVPTHFSQQNSSK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 VSSQPKAKEESPSKAGMNKRRKLKNKRRRSLPRPHDFFDAQTLDAIRHRAICFNLSAHIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 VSSQPKAKEESPSKAGMNKRRKLKNKRRRSLPRPHDFFDAQTLDAIRHRAICFNLSAHIE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 SLGKGHSVVFHSTVIAKRKEDSGKIKLLLHWMPEDILPDVWVNESERHQLKTKVVHLSKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SLGKGHSVVFHSTVIAKRKEDSGKIKLLLHWMPEDILPDVWVNESERHQLKTKVVHLSKL 430 440 450 460 470 480 490 500 510 pF1KE2 PKDTALLLDPNIYRTMPQKRLKRTLIRKVFNLYLSKQ ::::::::::::::::::::::: CCDS44 PKDTALLLDPNIYRTMPQKRLKR 490 500 >>CCDS58215.1 AEBP2 gene_id:121536|Hs108|chr12 (301 aa) initn: 2006 init1: 2006 opt: 2006 Z-score: 963.2 bits: 187.0 E(32554): 2.5e-47 Smith-Waterman score: 2006; 100.0% identity (100.0% similar) in 294 aa overlap (224-517:8-301) 200 210 220 230 240 250 pF1KE2 GGSSATSGGRRGSLEMSSDGEPLSRMDSEDSISSTIMDVDSTISSGRSTPAMMNGQGSTT :::::::::::::::::::::::::::::: CCDS58 MYTRRYSSISSTIMDVDSTISSGRSTPAMMNGQGSTT 10 20 30 260 270 280 290 300 310 pF1KE2 SSSKNIAYNCCWDQCQACFNSSPDLADHIRSIHVDGQRGGVFVCLWKGCKVYNTPSTSQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 SSSKNIAYNCCWDQCQACFNSSPDLADHIRSIHVDGQRGGVFVCLWKGCKVYNTPSTSQS 40 50 60 70 80 90 320 330 340 350 360 370 pF1KE2 WLQRHMLTHSGDKPFKCVVGGCNASFASQGGLARHVPTHFSQQNSSKVSSQPKAKEESPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 WLQRHMLTHSGDKPFKCVVGGCNASFASQGGLARHVPTHFSQQNSSKVSSQPKAKEESPS 100 110 120 130 140 150 380 390 400 410 420 430 pF1KE2 KAGMNKRRKLKNKRRRSLPRPHDFFDAQTLDAIRHRAICFNLSAHIESLGKGHSVVFHST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 KAGMNKRRKLKNKRRRSLPRPHDFFDAQTLDAIRHRAICFNLSAHIESLGKGHSVVFHST 160 170 180 190 200 210 440 450 460 470 480 490 pF1KE2 VIAKRKEDSGKIKLLLHWMPEDILPDVWVNESERHQLKTKVVHLSKLPKDTALLLDPNIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 VIAKRKEDSGKIKLLLHWMPEDILPDVWVNESERHQLKTKVVHLSKLPKDTALLLDPNIY 220 230 240 250 260 270 500 510 pF1KE2 RTMPQKRLKRTLIRKVFNLYLSKQ :::::::::::::::::::::::: CCDS58 RTMPQKRLKRTLIRKVFNLYLSKQ 280 290 300 517 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 10:45:37 2016 done: Sun Nov 6 10:45:38 2016 Total Scan time: 4.370 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]