FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4061, 334 aa 1>>>pF1KE4061 334 - 334 aa - 334 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6108+/-0.000889; mu= 14.4755+/- 0.053 mean_var=73.5666+/-14.700, 0's: 0 Z-trim(105.9): 15 B-trim: 56 in 2/51 Lambda= 0.149532 statistics sampled from 8682 (8689) to 8682 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.267), width: 16 Scan time: 2.150 The best scores are: opt bits E(32554) CCDS44723.1 ELMOD1 gene_id:55531|Hs108|chr11 ( 334) 2269 498.8 2.5e-141 CCDS76472.1 ELMOD1 gene_id:55531|Hs108|chr11 ( 328) 2226 489.6 1.5e-138 CCDS44724.1 ELMOD1 gene_id:55531|Hs108|chr11 ( 326) 2195 482.9 1.6e-136 CCDS3752.1 ELMOD2 gene_id:255520|Hs108|chr4 ( 293) 712 162.9 2.9e-40 >>CCDS44723.1 ELMOD1 gene_id:55531|Hs108|chr11 (334 aa) initn: 2269 init1: 2269 opt: 2269 Z-score: 2650.8 bits: 498.8 E(32554): 2.5e-141 Smith-Waterman score: 2269; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334) 10 20 30 40 50 60 pF1KE4 MKHFLRMLIQVCLYFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MKHFLRMLIQVCLYFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 SKSKLLQTSVSVHPDAIEKTIEDIMELKKINPDVNPQLGISLQACLLQIVGYRNLIADVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SKSKLLQTSVSVHPDAIEKTIEDIMELKKINPDVNPQLGISLQACLLQIVGYRNLIADVE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 KLRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 KLRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LYNLQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIGYSFAIVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LYNLQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIGYSFAIVG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 INITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMDIMEFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 INITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMDIMEFN 250 260 270 280 290 300 310 320 330 pF1KE4 RVREKFRKRIIKQLQNPDMALCPHFAASEGLINM :::::::::::::::::::::::::::::::::: CCDS44 RVREKFRKRIIKQLQNPDMALCPHFAASEGLINM 310 320 330 >>CCDS76472.1 ELMOD1 gene_id:55531|Hs108|chr11 (328 aa) initn: 2226 init1: 2226 opt: 2226 Z-score: 2600.8 bits: 489.6 E(32554): 1.5e-138 Smith-Waterman score: 2226; 100.0% identity (100.0% similar) in 328 aa overlap (7-334:1-328) 10 20 30 40 50 60 pF1KE4 MKHFLRMLIQVCLYFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRD :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MLIQVCLYFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRD 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 SKSKLLQTSVSVHPDAIEKTIEDIMELKKINPDVNPQLGISLQACLLQIVGYRNLIADVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 SKSKLLQTSVSVHPDAIEKTIEDIMELKKINPDVNPQLGISLQACLLQIVGYRNLIADVE 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE4 KLRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 KLRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLG 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE4 LYNLQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIGYSFAIVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 LYNLQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIGYSFAIVG 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE4 INITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMDIMEFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 INITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMDIMEFN 240 250 260 270 280 290 310 320 330 pF1KE4 RVREKFRKRIIKQLQNPDMALCPHFAASEGLINM :::::::::::::::::::::::::::::::::: CCDS76 RVREKFRKRIIKQLQNPDMALCPHFAASEGLINM 300 310 320 >>CCDS44724.1 ELMOD1 gene_id:55531|Hs108|chr11 (326 aa) initn: 1443 init1: 1423 opt: 2195 Z-score: 2564.7 bits: 482.9 E(32554): 1.6e-136 Smith-Waterman score: 2195; 97.6% identity (97.6% similar) in 334 aa overlap (1-334:1-326) 10 20 30 40 50 60 pF1KE4 MKHFLRMLIQVCLYFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MKHFLRMLIQVCLYFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 SKSKLLQTSVSVHPDAIEKTIEDIMELKKINPDVNPQLGISLQACLLQIVGYRNLIADVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SKSKLLQTSVSVHPDAIEKTIEDIMELKKINPDVNPQLGISLQACLLQIVGYRNLIADVE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 KLRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 KLRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LYNLQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIGYSFAIVG ::::::::::::::::::::::::::: ::::::::::::::::::::::::: CCDS44 LYNLQYFAERDATAAQQVLSDSLHPKC--------SKFSKAEWEKKRMDKAIGYSFAIVG 190 200 210 220 230 250 260 270 280 290 300 pF1KE4 INITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMDIMEFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 INITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMDIMEFN 240 250 260 270 280 290 310 320 330 pF1KE4 RVREKFRKRIIKQLQNPDMALCPHFAASEGLINM :::::::::::::::::::::::::::::::::: CCDS44 RVREKFRKRIIKQLQNPDMALCPHFAASEGLINM 300 310 320 >>CCDS3752.1 ELMOD2 gene_id:255520|Hs108|chr4 (293 aa) initn: 1031 init1: 612 opt: 712 Z-score: 836.4 bits: 162.9 E(32554): 2.9e-40 Smith-Waterman score: 999; 49.5% identity (74.3% similar) in 315 aa overlap (7-321:1-289) 10 20 30 40 50 60 pF1KE4 MKHFLRMLIQVCLYFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSLRD :.:.. .:: .:. .:...:..::.:::::: ..: ::.:: .::.:: CCDS37 MFISLWEFFYGHFFRFWMKWLLRQMTGKCELQRI-FDTYVGAQRTHRIENSLTY 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 SKSKLLQTSVSVHPDAIEKTIEDIMELKKINPDVNPQLGISLQACLLQIVGYRNLIADVE ::.:.:: .. : . ..: ..:::. :.:::. . .. : .. :::::.::..: ::: CCDS37 SKNKVLQKATHVVQSEVDKYVDDIMKEKNINPEKDASFKICMKMCLLQITGYKQLYLDVE 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE4 KLRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLG ..:.. ::::: ::::.:.:::..: :. :..:::::: :::::::::::::::::.:: CCDS37 SVRKRPYDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILG 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE4 LYNLQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIGYSFAIVG : :: ::.: .. :.:.:: : ::: .:::.:::: CCDS37 LINLVYFSENYTSEAHQILSRSNHPK-------------------------LGYSYAIVG 180 190 200 250 260 270 280 290 300 pF1KE4 INITDLAYNLLVSGALKTHFYNIAPEAPTLSHFQQTFCYLMHEFHKFWIEEDPMDIMEFN ::.:..::.:: : ::: :.::..: ::. ::.: .:::..:: :::.::.: .:: :: CCDS37 INLTEMAYSLLKSEALKFHLYNLVPGIPTMEHFHQFYCYLVYEFDKFWFEEEPESIMYFN 210 220 230 240 250 260 310 320 330 pF1KE4 RVREKFRKRIIKQLQNPDMALCPHFAASEGLINM ::::...: : . ..:: CCDS37 LYREKFHEKIKGLLLDCNVALTLKV 270 280 290 334 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:14:57 2016 done: Sun Nov 6 04:14:58 2016 Total Scan time: 2.150 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]