FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6485, 622 aa
  1>>>pF1KE6485 622 - 622 aa - 622 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.0356+/-0.00129; mu= 10.1327+/- 0.076
 mean_var=140.6069+/-28.608, 0's: 0 Z-trim(105.2): 224  B-trim: 0 in 0/50
 Lambda= 0.108161
 statistics sampled from 8026 (8285) to 8026 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.613), E-opt: 0.2 (0.255), width:  16
 Scan time:  2.840

The best scores are:                                      opt bits E(32554)
CCDS44550.1 ZDHHC13 gene_id:54503|Hs108|chr11      ( 622) 4298 683.4 2.4e-196
CCDS44551.1 ZDHHC13 gene_id:54503|Hs108|chr11      ( 492) 3383 540.5 1.9e-153
CCDS44946.1 ZDHHC17 gene_id:23390|Hs108|chr12      ( 632) 2096 339.8 6.6e-93


>>CCDS44550.1 ZDHHC13 gene_id:54503|Hs108|chr11           (622 aa)
 initn: 4298 init1: 4298 opt: 4298  Z-score: 3638.6  bits: 683.4 E(32554): 2.4e-196
Smith-Waterman score: 4298; 100.0% identity (100.0% similar) in 622 aa overlap (1-622:1-622)

               10        20        30        40        50        60
pF1KE6 MEGPGLGSQCRNHSHGPHPPGFGRYGICAHENKELANAREALPLIEDSSNCDIVKATQYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MEGPGLGSQCRNHSHGPHPPGFGRYGICAHENKELANAREALPLIEDSSNCDIVKATQYG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 IFERCKELVEAGYDVRQPDKENVSLLHWAAINNRLDLVKFYISKGAVVDQLGGDLNSTPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 IFERCKELVEAGYDVRQPDKENVSLLHWAAINNRLDLVKFYISKGAVVDQLGGDLNSTPL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 HWAIRQGHLPMVILLLQHGADPTLIDGEGFSSIHLAVLFQHMPIIAYLISKGQSVNMTDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HWAIRQGHLPMVILLLQHGADPTLIDGEGFSSIHLAVLFQHMPIIAYLISKGQSVNMTDV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 NGQTPLMLSAHKVIGPEPTGFLLKFNPSLNVVDKIHQNTPLHWAVAAGNVNAVDKLLEAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NGQTPLMLSAHKVIGPEPTGFLLKFNPSLNVVDKIHQNTPLHWAVAAGNVNAVDKLLEAG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE6 SSLDIQNVKGETPLDMALQNKNQLIIHMLKTEAKMRANQKFRLWRWLQKCELFLLLMLSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SSLDIQNVKGETPLDMALQNKNQLIIHMLKTEAKMRANQKFRLWRWLQKCELFLLLMLSV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE6 ITMWAIGYILDFNSDSWLLKGCLLVTLFFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ITMWAIGYILDFNSDSWLLKGCLLVTLFFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE6 MTWFILFFPDLAGAPFYFSFIFSIVAFLYFFYKTWATDPGFTKASEEEKKVNIITLAETG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MTWFILFFPDLAGAPFYFSFIFSIVAFLYFFYKTWATDPGFTKASEEEKKVNIITLAETG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE6 SLDFRTFCTSCLIRKPLRSLHCHVCNCCVARYDQHCLWTGRCIGFGNHHYYIFFLFFLSM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SLDFRTFCTSCLIRKPLRSLHCHVCNCCVARYDQHCLWTGRCIGFGNHHYYIFFLFFLSM
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE6 VCGWIIYGSFIYLSSHCATTFKEDGLWTYLNQIVACSPWVLYILMLATFHFSWSTFLLLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VCGWIIYGSFIYLSSHCATTFKEDGLWTYLNQIVACSPWVLYILMLATFHFSWSTFLLLN
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE6 QLFQIAFLGLTSHERISLQKQSKHMKQTLSLRKTPYNLGFMQNLADFFQCGCFGLVKPCV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QLFQIAFLGLTSHERISLQKQSKHMKQTLSLRKTPYNLGFMQNLADFFQCGCFGLVKPCV
              550       560       570       580       590       600

              610       620  
pF1KE6 VDWTSQYTMVFHPAREKVLRSV
       ::::::::::::::::::::::
CCDS44 VDWTSQYTMVFHPAREKVLRSV
              610       620  

>>CCDS44551.1 ZDHHC13 gene_id:54503|Hs108|chr11           (492 aa)
 initn: 3383 init1: 3383 opt: 3383  Z-score: 2868.3  bits: 540.5 E(32554): 1.9e-153
Smith-Waterman score: 3383; 100.0% identity (100.0% similar) in 492 aa overlap (131-622:1-492)

              110       120       130       140       150       160
pF1KE6 YISKGAVVDQLGGDLNSTPLHWAIRQGHLPMVILLLQHGADPTLIDGEGFSSIHLAVLFQ
                                     ::::::::::::::::::::::::::::::
CCDS44                               MVILLLQHGADPTLIDGEGFSSIHLAVLFQ
                                             10        20        30

              170       180       190       200       210       220
pF1KE6 HMPIIAYLISKGQSVNMTDVNGQTPLMLSAHKVIGPEPTGFLLKFNPSLNVVDKIHQNTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HMPIIAYLISKGQSVNMTDVNGQTPLMLSAHKVIGPEPTGFLLKFNPSLNVVDKIHQNTP
               40        50        60        70        80        90

              230       240       250       260       270       280
pF1KE6 LHWAVAAGNVNAVDKLLEAGSSLDIQNVKGETPLDMALQNKNQLIIHMLKTEAKMRANQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LHWAVAAGNVNAVDKLLEAGSSLDIQNVKGETPLDMALQNKNQLIIHMLKTEAKMRANQK
              100       110       120       130       140       150

              290       300       310       320       330       340
pF1KE6 FRLWRWLQKCELFLLLMLSVITMWAIGYILDFNSDSWLLKGCLLVTLFFLTSLFPRFLVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 FRLWRWLQKCELFLLLMLSVITMWAIGYILDFNSDSWLLKGCLLVTLFFLTSLFPRFLVG
              160       170       180       190       200       210

              350       360       370       380       390       400
pF1KE6 YKNLVYLPTAFLLSSVFWIFMTWFILFFPDLAGAPFYFSFIFSIVAFLYFFYKTWATDPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 YKNLVYLPTAFLLSSVFWIFMTWFILFFPDLAGAPFYFSFIFSIVAFLYFFYKTWATDPG
              220       230       240       250       260       270

              410       420       430       440       450       460
pF1KE6 FTKASEEEKKVNIITLAETGSLDFRTFCTSCLIRKPLRSLHCHVCNCCVARYDQHCLWTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 FTKASEEEKKVNIITLAETGSLDFRTFCTSCLIRKPLRSLHCHVCNCCVARYDQHCLWTG
              280       290       300       310       320       330

              470       480       490       500       510       520
pF1KE6 RCIGFGNHHYYIFFLFFLSMVCGWIIYGSFIYLSSHCATTFKEDGLWTYLNQIVACSPWV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RCIGFGNHHYYIFFLFFLSMVCGWIIYGSFIYLSSHCATTFKEDGLWTYLNQIVACSPWV
              340       350       360       370       380       390

              530       540       550       560       570       580
pF1KE6 LYILMLATFHFSWSTFLLLNQLFQIAFLGLTSHERISLQKQSKHMKQTLSLRKTPYNLGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LYILMLATFHFSWSTFLLLNQLFQIAFLGLTSHERISLQKQSKHMKQTLSLRKTPYNLGF
              400       410       420       430       440       450

              590       600       610       620  
pF1KE6 MQNLADFFQCGCFGLVKPCVVDWTSQYTMVFHPAREKVLRSV
       ::::::::::::::::::::::::::::::::::::::::::
CCDS44 MQNLADFFQCGCFGLVKPCVVDWTSQYTMVFHPAREKVLRSV
              460       470       480       490  

>>CCDS44946.1 ZDHHC17 gene_id:23390|Hs108|chr12           (632 aa)
 initn: 2070 init1: 1025 opt: 2096  Z-score: 1781.5  bits: 339.8 E(32554): 6.6e-93
Smith-Waterman score: 2096; 51.3% identity (77.9% similar) in 571 aa overlap (45-611:53-621)

           20        30        40        50        60        70    
pF1KE6 HGPHPPGFGRYGICAHENKELANAREALPLIEDSSNCDIVKATQYGIFERCKELVEAGYD
                                     :.: :. ::::::::::.:::.::::::::
CCDS44 GCVPLLHPEEIKPQSHYNHGYGEPLGRKTHIDDYSTWDIVKATQYGIYERCRELVEAGYD
             30        40        50        60        70        80  

           80        90       100       110       120       130    
pF1KE6 VRQPDKENVSLLHWAAINNRLDLVKFYISKGAVVDQLGGDLNSTPLHWAIRQGHLPMVIL
       :::::::::.::::::::::.::::.::::::.:::::::::::::::: ::::: ::. 
CCDS44 VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQ
             90       100       110       120       130       140  

          140       150       160       170       180       190    
pF1KE6 LLQHGADPTLIDGEGFSSIHLAVLFQHMPIIAYLISKGQSVNMTDVNGQTPLMLSAHKVI
       :...::::.:::::: : ::::. : :  :.::::.:::.:.: : ::.:::: .:... 
CCDS44 LMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTH
            150       160       170       180       190       200  

          200       210       220       230       240       250    
pF1KE6 GPEPTGFLLKFNPSLNVVDKIHQNTPLHWAVAAGNVNAVDKLLEAGSSLDIQNVKGETPL
       . .:: .:: :: :.:. :: :.:: ::::: :::..... :::::...: ::.:::. :
CCDS44 SVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESAL
            210       220       230       240       250       260  

          260       270       280       290          300       310 
pF1KE6 DMALQNKNQLIIHMLKTEAKMRANQKFRLWRWLQKCELF---LLLMLSVITMWAIGYILD
       :.: : ::  .:. :.   . .. ..  . : :.  . :   ..:    ...: .:.: :
CCDS44 DLAKQRKNVWMINHLQEARQAKGYDNPSFLRKLKADKEFRQKVMLGTPFLVIWLVGFIAD
            270       280       290       300       310       320  

             320       330       340       350       360       370 
pF1KE6 FNSDSWLLKGCLLVTLFFLTSLFPRFLVGYKNLVYLPTAFLLSSVFWIFMTWFILFFPDL
       .: ::::.:: .   ..  .... . .  ..    :: .. :.. ::...:::. :. ::
CCDS44 LNIDSWLIKGLMYGGVWATVQFLSKSFFDHSMHSALPLGIYLATKFWMYVTWFFWFWNDL
            330       340       350       360       370       380  

             380       390       400       410       420       430 
pF1KE6 AGAPFYFSFIFSIVAFLYFFYKTWATDPGFTKASEEEKKVNIITLAETGSLDFRTFCTSC
           ... :. . ::..: : :.: .:::. ::.::.:: .:. ::::::::.  ::..:
CCDS44 NFLFIHLPFLANSVALFYNFGKSWKSDPGIIKATEEQKKKTIVELAETGSLDLSIFCSTC
            390       400       410       420       430       440  

             440       450       460       470        480       490
pF1KE6 LIRKPLRSLHCHVCNCCVARYDQHCLWTGRCIGFGNHHYYIFFLFFLS-MVCGWIIYGSF
       :::::.:: :: ::: :.:..:.:: :.: :.: :::.:.. .::::  :.: :.::: .
CCDS44 LIRKPVRSKHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYLFFLLFMIC-WMIYGCI
            450       460       470       480       490        500 

              500       510       520       530       540       550
pF1KE6 IYLSSHCATTFKEDGLWTYLNQIVACSPWVLYILMLATFHFSWSTFLLLNQLFQIAFLGL
        : . :: ::. .::.:::..::..::::...... ..::: : . ::. :..::. ::.
CCDS44 SYWGLHCETTYTKDGFWTYITQIATCSPWMFWMFLNSVFHFMWVAVLLMCQMYQISCLGI
             510       520       530       540       550       560 

              560       570       580       590       600       610
pF1KE6 TSHERISLQKQSKHMKQTLSLRKTPYNLGFMQNLADFFQCGCFGLVKPCVVDWTSQYTMV
       :..::.. ..  ::.: : .  ..:.: : ..:. :::.  : :: .: .:::: :::. 
CCDS44 TTNERMNARRY-KHFKVTTTSIESPFNHGCVRNIIDFFEFRCCGLFRPVIVDWTRQYTIE
             570        580       590       600       610       620

              620  
pF1KE6 FHPAREKVLRSV
       .           
CCDS44 YDQISGSGYQLV
              630  




622 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 13:45:46 2016 done: Tue Nov  8 13:45:47 2016
 Total Scan time:  2.840 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]