FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5129, 164 aa 1>>>pF1KE5129 164 - 164 aa - 164 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8324+/-0.00037; mu= 14.0308+/- 0.023 mean_var=57.5177+/-11.894, 0's: 0 Z-trim(111.9): 81 B-trim: 0 in 0/50 Lambda= 0.169112 statistics sampled from 20538 (20624) to 20538 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.629), E-opt: 0.2 (0.242), width: 16 Scan time: 4.980 The best scores are: opt bits E(85289) NP_001137504 (OMIM: 608608) peptidyl-prolyl cis-tr ( 164) 1074 270.2 1.1e-72 NP_066953 (OMIM: 123840) peptidyl-prolyl cis-trans ( 165) 966 243.8 9.1e-65 NP_005720 (OMIM: 604486) peptidyl-prolyl cis-trans ( 207) 778 198.0 7e-51 XP_016855541 (OMIM: 602435) PREDICTED: peptidyl-pr ( 217) 701 179.3 3.3e-45 NP_006103 (OMIM: 602435) peptidyl-prolyl cis-trans ( 301) 701 179.3 4.3e-45 XP_006710353 (OMIM: 602435) PREDICTED: peptidyl-pr ( 288) 698 178.6 6.9e-45 XP_011509880 (OMIM: 601181,608033) PREDICTED: E3 S (2281) 659 169.6 2.7e-41 XP_005264064 (OMIM: 601181,608033) PREDICTED: E3 S (2282) 659 169.6 2.7e-41 XP_011509878 (OMIM: 601181,608033) PREDICTED: E3 S (3199) 659 169.7 3.6e-41 NP_006258 (OMIM: 601181,608033) E3 SUMO-protein li (3224) 659 169.7 3.6e-41 XP_005264062 (OMIM: 601181,608033) PREDICTED: E3 S (3232) 659 169.7 3.7e-41 XP_005264061 (OMIM: 601181,608033) PREDICTED: E3 S (3232) 659 169.7 3.7e-41 XP_005264060 (OMIM: 601181,608033) PREDICTED: E3 S (3250) 659 169.7 3.7e-41 XP_011509877 (OMIM: 601181,608033) PREDICTED: E3 S (3257) 659 169.7 3.7e-41 XP_005264059 (OMIM: 601181,608033) PREDICTED: E3 S (3258) 659 169.7 3.7e-41 XP_011538803 (OMIM: 602435) PREDICTED: peptidyl-pr ( 230) 635 163.2 2.4e-40 NP_982281 (OMIM: 602435) peptidyl-prolyl cis-trans ( 296) 635 163.2 3e-40 NP_001181936 (OMIM: 602435) peptidyl-prolyl cis-tr ( 314) 635 163.3 3.1e-40 XP_016855540 (OMIM: 602435) PREDICTED: peptidyl-pr ( 314) 635 163.3 3.1e-40 NP_001306222 (OMIM: 602435) peptidyl-prolyl cis-tr ( 283) 632 162.5 4.8e-40 XP_006710352 (OMIM: 602435) PREDICTED: peptidyl-pr ( 301) 632 162.5 5e-40 NP_001287910 (OMIM: 123840) peptidyl-prolyl cis-tr ( 105) 622 159.8 1.2e-39 XP_005269436 (OMIM: 604486) PREDICTED: peptidyl-pr ( 201) 597 153.9 1.3e-37 NP_000933 (OMIM: 123841,259440) peptidyl-prolyl ci ( 216) 582 150.2 1.8e-36 NP_005029 (OMIM: 601753) peptidyl-prolyl cis-trans ( 370) 578 149.4 5.5e-36 NP_000934 (OMIM: 123842) peptidyl-prolyl cis-trans ( 212) 549 142.2 4.7e-34 XP_005270419 (OMIM: 606095) PREDICTED: peptidyl-pr ( 177) 544 140.9 9.5e-34 NP_006338 (OMIM: 606095) peptidyl-prolyl cis-trans ( 177) 544 140.9 9.5e-34 XP_016855546 (OMIM: 606095) PREDICTED: peptidyl-pr ( 177) 544 140.9 9.5e-34 XP_016860791 (OMIM: 606093) PREDICTED: peptidyl-pr ( 272) 461 120.8 1.7e-27 NP_004783 (OMIM: 606093) peptidyl-prolyl cis-trans ( 754) 461 121.0 3.9e-27 XP_005247024 (OMIM: 606093) PREDICTED: peptidyl-pr ( 754) 461 121.0 3.9e-27 XP_005247023 (OMIM: 606093) PREDICTED: peptidyl-pr ( 754) 461 121.0 3.9e-27 XP_016861963 (OMIM: 161565) PREDICTED: NK-tumor re (1435) 457 120.2 1.3e-26 XP_006713234 (OMIM: 161565) PREDICTED: NK-tumor re (1436) 457 120.2 1.3e-26 NP_005376 (OMIM: 161565) NK-tumor recognition prot (1462) 457 120.2 1.3e-26 XP_005265230 (OMIM: 161565) PREDICTED: NK-tumor re (1463) 457 120.2 1.3e-26 XP_016855547 (OMIM: 606095) PREDICTED: peptidyl-pr ( 134) 395 104.5 6.6e-23 NP_001317439 (OMIM: 606095) peptidyl-prolyl cis-tr ( 134) 395 104.5 6.6e-23 XP_016855548 (OMIM: 606095) PREDICTED: peptidyl-pr ( 134) 395 104.5 6.6e-23 NP_057143 (OMIM: 601301) peptidyl-prolyl cis-trans ( 166) 378 100.4 1.4e-21 XP_016859845 (OMIM: 615811) PREDICTED: peptidyl-pr ( 161) 342 91.6 6e-19 XP_016859844 (OMIM: 615811) PREDICTED: peptidyl-pr ( 161) 342 91.6 6e-19 XP_011509660 (OMIM: 615811) PREDICTED: peptidyl-pr ( 161) 342 91.6 6e-19 XP_005246709 (OMIM: 615811) PREDICTED: peptidyl-pr ( 161) 342 91.6 6e-19 NP_570981 (OMIM: 615811) peptidyl-prolyl cis-trans ( 161) 342 91.6 6e-19 XP_016884195 (OMIM: 607588) PREDICTED: peptidyl-pr ( 266) 320 86.4 3.7e-17 XP_016884194 (OMIM: 607588) PREDICTED: peptidyl-pr ( 362) 320 86.4 4.8e-17 XP_011528351 (OMIM: 607588) PREDICTED: peptidyl-pr ( 438) 320 86.5 5.6e-17 XP_011528352 (OMIM: 607588) PREDICTED: peptidyl-pr ( 438) 320 86.5 5.6e-17 >>NP_001137504 (OMIM: 608608) peptidyl-prolyl cis-trans (164 aa) initn: 1074 init1: 1074 opt: 1074 Z-score: 1426.2 bits: 270.2 E(85289): 1.1e-72 Smith-Waterman score: 1074; 97.6% identity (98.2% similar) in 164 aa overlap (1-164:1-164) 10 20 30 40 50 60 pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF ::::::::.:: ::::::::::::::::: :::::::::::::::::::::::::::::: NP_001 MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 70 80 90 100 110 120 130 140 150 160 pF1KE5 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF :::::::::::::::::::::::::::::::::::::::::::: NP_001 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF 130 140 150 160 >>NP_066953 (OMIM: 123840) peptidyl-prolyl cis-trans iso (165 aa) initn: 984 init1: 966 opt: 966 Z-score: 1283.8 bits: 243.8 E(85289): 9.1e-65 Smith-Waterman score: 966; 86.0% identity (95.1% similar) in 164 aa overlap (1-164:1-164) 10 20 30 40 50 60 pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF ::: .:::::.:::.::::.:..:::::. :::::::::::::::: ::::::::::::: NP_066 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE :::::::::::::: ::::::::.:::.: :::: ::::::::::::::::::::.:::: NP_066 MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE 70 80 90 100 110 120 130 140 150 160 pF1KE5 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF :::::::.:::::: .:::::::.:: ::.:::::::::::::. NP_066 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE 130 140 150 160 >>NP_005720 (OMIM: 604486) peptidyl-prolyl cis-trans iso (207 aa) initn: 767 init1: 748 opt: 778 Z-score: 1034.4 bits: 198.0 E(85289): 7e-51 Smith-Waterman score: 778; 66.7% identity (87.0% similar) in 162 aa overlap (3-164:45-206) 10 20 30 pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKT : .:..:. ..::::::. ..: :: . :: NP_005 SVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKT 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE5 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKH ::::::: :::::: :::: :::.::.::::.:::: ::::: ::::: .: :::. :: NP_005 AENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKH 80 90 100 110 120 130 100 110 120 130 140 150 pF1KE5 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT .: :.::::::::::::::::::. ::.:::::::.::.::: ...:. .: :: ....: NP_005 VGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRT 140 150 160 170 180 190 160 pF1KE5 SKKITIADCGQF ::::.:.::::. NP_005 SKKIVITDCGQLS 200 >>XP_016855541 (OMIM: 602435) PREDICTED: peptidyl-prolyl (217 aa) initn: 707 init1: 689 opt: 701 Z-score: 932.6 bits: 179.3 E(85289): 3.3e-45 Smith-Waterman score: 701; 61.7% identity (80.9% similar) in 162 aa overlap (3-164:55-216) 10 20 30 pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKT : :..:: . .:: :::.. : .: . : XP_016 TLEENKEEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMT 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE5 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKH ::::: : : :::: .::: :::::: ::::::::: ::::: :::::.::::::.: :: XP_016 AENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKH 90 100 110 120 130 140 100 110 120 130 140 150 pF1KE5 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT :: :.:::::.::::::::::. ::.:::::::.::.: : ..... .: : ...: XP_016 TGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKP 150 160 170 180 190 200 160 pF1KE5 SKKITIADCGQF ..:. :::::.. XP_016 KQKVIIADCGEYV 210 >>NP_006103 (OMIM: 602435) peptidyl-prolyl cis-trans iso (301 aa) initn: 707 init1: 689 opt: 701 Z-score: 930.5 bits: 179.3 E(85289): 4.3e-45 Smith-Waterman score: 701; 61.7% identity (80.9% similar) in 162 aa overlap (3-164:139-300) 10 20 30 pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKT : :..:: . .:: :::.. : .: . : NP_006 TLEENKEEEGSEPPKAETQEGEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMT 110 120 130 140 150 160 40 50 60 70 80 90 pF1KE5 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKH ::::: : : :::: .::: :::::: ::::::::: ::::: :::::.::::::.: :: NP_006 AENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKH 170 180 190 200 210 220 100 110 120 130 140 150 pF1KE5 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT :: :.:::::.::::::::::. ::.:::::::.::.: : ..... .: : ...: NP_006 TGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKP 230 240 250 260 270 280 160 pF1KE5 SKKITIADCGQF ..:. :::::.. NP_006 KQKVIIADCGEYV 290 300 >>XP_006710353 (OMIM: 602435) PREDICTED: peptidyl-prolyl (288 aa) initn: 707 init1: 689 opt: 698 Z-score: 926.8 bits: 178.6 E(85289): 6.9e-45 Smith-Waterman score: 698; 62.3% identity (81.8% similar) in 159 aa overlap (6-164:129-287) 10 20 30 pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKTAEN :..:: . .:: :::.. : .: . :::: XP_006 DDWLKKFSGKTLEENKEEEGSEPPKAETQEVYMDIKIGNKPAGRIQMLLRSDVVPMTAEN 100 110 120 130 140 150 40 50 60 70 80 90 pF1KE5 FRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGS :: : : :::: .::: :::::: ::::::::: ::::: :::::.::::::.: :::: XP_006 FRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGP 160 170 180 190 200 210 100 110 120 130 140 150 pF1KE5 GILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKK :.:::::.::::::::::. ::.:::::::.::.: : ..... .: : ...: ..: XP_006 GLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQK 220 230 240 250 260 270 160 pF1KE5 ITIADCGQF . :::::.. XP_006 VIIADCGEYV 280 >>XP_011509880 (OMIM: 601181,608033) PREDICTED: E3 SUMO- (2281 aa) initn: 659 init1: 659 opt: 659 Z-score: 862.2 bits: 169.6 E(85289): 2.7e-41 Smith-Waterman score: 659; 59.0% identity (82.6% similar) in 161 aa overlap (3-163:2120-2280) 10 20 30 pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKT : :::::. .::.:::::...::.. . .: XP_011 FKKTFEECQQNLMKLQKGHVSLAAELSKETNPVVFFDVCADGEPLGRITMELFSNIVPRT 2090 2100 2110 2120 2130 2140 40 50 60 70 80 90 pF1KE5 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKH ::::::: :::::: .:.: :::.:: :.:::::.:.:.::: .::::.::.:::. :: XP_011 AENFRALCTGEKGFGFKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKH 2150 2160 2170 2180 2190 2200 100 110 120 130 140 150 pF1KE5 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT :: :.::::: : :::.::: : :.: :: :::.:: ::. .. :. .: :: .... XP_011 TGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSV 2210 2220 2230 2240 2250 2260 160 pF1KE5 SKKITIADCGQF ..:::..::: XP_011 CRRITITECGQI 2270 2280 >>XP_005264064 (OMIM: 601181,608033) PREDICTED: E3 SUMO- (2282 aa) initn: 659 init1: 659 opt: 659 Z-score: 862.2 bits: 169.6 E(85289): 2.7e-41 Smith-Waterman score: 659; 59.0% identity (82.6% similar) in 161 aa overlap (3-163:2121-2281) 10 20 30 pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKT : :::::. .::.:::::...::.. . .: XP_005 FKKTFEECQQNLMKLQKGHVSLAAELSKETNPVVFFDVCADGEPLGRITMELFSNIVPRT 2100 2110 2120 2130 2140 2150 40 50 60 70 80 90 pF1KE5 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKH ::::::: :::::: .:.: :::.:: :.:::::.:.:.::: .::::.::.:::. :: XP_005 AENFRALCTGEKGFGFKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKH 2160 2170 2180 2190 2200 2210 100 110 120 130 140 150 pF1KE5 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT :: :.::::: : :::.::: : :.: :: :::.:: ::. .. :. .: :: .... XP_005 TGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSV 2220 2230 2240 2250 2260 2270 160 pF1KE5 SKKITIADCGQF ..:::..::: XP_005 CRRITITECGQI 2280 >>XP_011509878 (OMIM: 601181,608033) PREDICTED: E3 SUMO- (3199 aa) initn: 659 init1: 659 opt: 659 Z-score: 860.1 bits: 169.7 E(85289): 3.6e-41 Smith-Waterman score: 659; 59.0% identity (82.6% similar) in 161 aa overlap (3-163:3038-3198) 10 20 30 pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKT : :::::. .::.:::::...::.. . .: XP_011 FKKTFEECQQNLMKLQKGHVSLAAELSKETNPVVFFDVCADGEPLGRITMELFSNIVPRT 3010 3020 3030 3040 3050 3060 40 50 60 70 80 90 pF1KE5 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKH ::::::: :::::: .:.: :::.:: :.:::::.:.:.::: .::::.::.:::. :: XP_011 AENFRALCTGEKGFGFKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKH 3070 3080 3090 3100 3110 3120 100 110 120 130 140 150 pF1KE5 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT :: :.::::: : :::.::: : :.: :: :::.:: ::. .. :. .: :: .... XP_011 TGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSV 3130 3140 3150 3160 3170 3180 160 pF1KE5 SKKITIADCGQF ..:::..::: XP_011 CRRITITECGQI 3190 >>NP_006258 (OMIM: 601181,608033) E3 SUMO-protein ligase (3224 aa) initn: 659 init1: 659 opt: 659 Z-score: 860.0 bits: 169.7 E(85289): 3.6e-41 Smith-Waterman score: 659; 59.0% identity (82.6% similar) in 161 aa overlap (3-163:3063-3223) 10 20 30 pF1KE5 MVNSVVFFDITVDGKPLGRISIKLFADKILKT : :::::. .::.:::::...::.. . .: NP_006 FKKTFEECQQNLMKLQKGHVSLAAELSKETNPVVFFDVCADGEPLGRITMELFSNIVPRT 3040 3050 3060 3070 3080 3090 40 50 60 70 80 90 pF1KE5 AENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIRKH ::::::: :::::: .:.: :::.:: :.:::::.:.:.::: .::::.::.:::. :: NP_006 AENFRALCTGEKGFGFKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKH 3100 3110 3120 3130 3140 3150 100 110 120 130 140 150 pF1KE5 TGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKT :: :.::::: : :::.::: : :.: :: :::.:: ::. .. :. .: :: .... NP_006 TGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSV 3160 3170 3180 3190 3200 3210 160 pF1KE5 SKKITIADCGQF ..:::..::: NP_006 CRRITITECGQI 3220 164 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 07:19:26 2016 done: Tue Nov 8 07:19:27 2016 Total Scan time: 4.980 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]