FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB5753, 756 aa 1>>>pF1KB5753 756 - 756 aa - 756 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.1070+/-0.00116; mu= 3.2554+/- 0.070 mean_var=203.7262+/-40.254, 0's: 0 Z-trim(108.2): 22 B-trim: 0 in 0/53 Lambda= 0.089857 statistics sampled from 10066 (10074) to 10066 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.635), E-opt: 0.2 (0.309), width: 16 Scan time: 4.110 The best scores are: opt bits E(32554) CCDS44174.1 DNTTIP2 gene_id:30836|Hs108|chr1 ( 756) 4816 637.7 2e-182 >>CCDS44174.1 DNTTIP2 gene_id:30836|Hs108|chr1 (756 aa) initn: 4816 init1: 4816 opt: 4816 Z-score: 3388.7 bits: 637.7 E(32554): 2e-182 Smith-Waterman score: 4816; 99.9% identity (100.0% similar) in 756 aa overlap (1-756:1-756) 10 20 30 40 50 60 pF1KB5 MVVTRSARAKASIQAASAESSGQKSFAANGIQAHPESSTGSDARTTAESQTTGKQSLIPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MVVTRSARAKASIQAASAESSGQKSFAANGIQAHPESSTGSDARTTAESQTTGKQSLIPR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 TPKARKRKSRTTGSLPKGTEPSTDGETSEAESNYSVSEHHDTILRVTRRRQILIACSPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 TPKARKRKSRTTGSLPKGTEPSTDGETSEAESNYSVSEHHDTILRVTRRRQILIACSPVS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 SVRKKPKVTPTKESYTEEIVSEAESHVSGISRIVLPTEKTTGARRSKAKSLTDPSQESHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SVRKKPKVTPTKESYTEEIVSEAESHVSGISRIVLPTEKTTGARRSKAKSLTDPSQESHT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 EAISDAETSSSDISFSGIATRRTRSMQRKLKAQTEKKDSKIVPGNEKQIVGTPVNSEDSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EAISDAETSSSDISFSGIATRRTRSMQRKLKAQTEKKDSKIVPGNEKQIVGTPVNSEDSD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 TRQTSHLQARSLSEINKPNFYNNDFDDDFSHRSSENILTVHEQANVESLKETKQNCKDLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 TRQTSHLQARSLSEINKPNFYNNDFDDDFSHRSSENILTVHEQANVESLKETKQNCKDLD 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 EDANGITDDGKEINEKSSQLKNLSELQDTSLQQLVSQRHSTPQNKNAVSVHSNLNSEAVM ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EDANGITDEGKEINEKSSQLKNLSELQDTSLQQLVSQRHSTPQNKNAVSVHSNLNSEAVM 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 KSLTQTFATVEVGRWNNNKKSPIKASDLTKFGDCGGSDDEEESTVISVSEDMNSEGNVDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 KSLTQTFATVEVGRWNNNKKSPIKASDLTKFGDCGGSDDEEESTVISVSEDMNSEGNVDF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB5 ECDTKLYTSAPNTSQGKDNSVLLVLSSDESQQSENSENEEDTLCFVENSGQRESLSGDTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 ECDTKLYTSAPNTSQGKDNSVLLVLSSDESQQSENSENEEDTLCFVENSGQRESLSGDTG 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB5 SLSCDNALFVIDTTPGMSADKNFYLEEEDKASEVAIEEEKEEEEDEKSEEDSSDHDENED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SLSCDNALFVIDTTPGMSADKNFYLEEEDKASEVAIEEEKEEEEDEKSEEDSSDHDENED 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB5 EFSDEEDFLNSTKAKLLKLTSSSIDPGLSIKQLGGLYINFNADKLQSNKRTLTQIKEKKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EFSDEEDFLNSTKAKLLKLTSSSIDPGLSIKQLGGLYINFNADKLQSNKRTLTQIKEKKK 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB5 NELLQKAVITPDFEKNHCVPPYSESKYQLQKKRRKERQKTAGDGWFGMKAPEMTNELKND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 NELLQKAVITPDFEKNHCVPPYSESKYQLQKKRRKERQKTAGDGWFGMKAPEMTNELKND 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB5 LKALKMRASMDPKRFYKKNDRDGFPKYFQIGTIVDNPADFYHSRIPKKQRKRTIVEELLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LKALKMRASMDPKRFYKKNDRDGFPKYFQIGTIVDNPADFYHSRIPKKQRKRTIVEELLA 670 680 690 700 710 720 730 740 750 pF1KB5 DSEFRRYNRRKYSEIMAEKAANAAGKKFRKKKKFRN :::::::::::::::::::::::::::::::::::: CCDS44 DSEFRRYNRRKYSEIMAEKAANAAGKKFRKKKKFRN 730 740 750 756 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 10:48:31 2016 done: Sun Nov 6 10:48:32 2016 Total Scan time: 4.110 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]