FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1114, 160 aa 1>>>pF1KE1114 160 - 160 aa - 160 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4715+/-0.000587; mu= 12.9125+/- 0.036 mean_var=87.6567+/-17.170, 0's: 0 Z-trim(114.7): 11 B-trim: 0 in 0/54 Lambda= 0.136988 statistics sampled from 15206 (15216) to 15206 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.815), E-opt: 0.2 (0.467), width: 16 Scan time: 2.000 The best scores are: opt bits E(32554) CCDS75982.1 XAGE1B gene_id:653220|Hs108|chrX ( 81) 551 117.2 2.2e-27 CCDS48126.2 XAGE1E gene_id:653067|Hs108|chrX ( 81) 551 117.2 2.2e-27 >>CCDS75982.1 XAGE1B gene_id:653220|Hs108|chrX (81 aa) initn: 551 init1: 551 opt: 551 Z-score: 605.0 bits: 117.2 E(32554): 2.2e-27 Smith-Waterman score: 551; 100.0% identity (100.0% similar) in 81 aa overlap (80-160:1-81) 50 60 70 80 90 100 pF1KE1 FWTPQTGPGEGRHERHTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLR :::::::::::::::::::::::::::::: CCDS75 MESPKKKNQQLKVGILHLGSRQKKIRIQLR 10 20 30 110 120 130 140 150 160 pF1KE1 SQCATWKVICKSCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SQCATWKVICKSCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 40 50 60 70 80 >>CCDS48126.2 XAGE1E gene_id:653067|Hs108|chrX (81 aa) initn: 551 init1: 551 opt: 551 Z-score: 605.0 bits: 117.2 E(32554): 2.2e-27 Smith-Waterman score: 551; 100.0% identity (100.0% similar) in 81 aa overlap (80-160:1-81) 50 60 70 80 90 100 pF1KE1 FWTPQTGPGEGRHERHTQTQNHTASPRSPVMESPKKKNQQLKVGILHLGSRQKKIRIQLR :::::::::::::::::::::::::::::: CCDS48 MESPKKKNQQLKVGILHLGSRQKKIRIQLR 10 20 30 110 120 130 140 150 160 pF1KE1 SQCATWKVICKSCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 SQCATWKVICKSCISQTPGINLDLGSGVKVKIIPKEEHCKMPEAGEEQPQV 40 50 60 70 80 160 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 10:50:27 2016 done: Sun Nov 6 10:50:28 2016 Total Scan time: 2.000 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]