FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5807, 1406 aa 1>>>pF1KE5807 1406 - 1406 aa - 1406 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.2774+/-0.00132; mu= -2.2999+/- 0.079 mean_var=388.4303+/-83.625, 0's: 0 Z-trim(110.3): 151 B-trim: 479 in 2/53 Lambda= 0.065076 statistics sampled from 11348 (11476) to 11348 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.353), width: 16 Scan time: 5.590 The best scores are: opt bits E(32554) CCDS43789.1 CNTLN gene_id:54875|Hs108|chr9 (1406) 8805 842.4 0 CCDS47953.1 CNTLN gene_id:54875|Hs108|chr9 ( 391) 2429 243.3 1e-63 >>CCDS43789.1 CNTLN gene_id:54875|Hs108|chr9 (1406 aa) initn: 8805 init1: 8805 opt: 8805 Z-score: 4485.4 bits: 842.4 E(32554): 0 Smith-Waterman score: 8805; 100.0% identity (100.0% similar) in 1406 aa overlap (1-1406:1-1406) 10 20 30 40 50 60 pF1KE5 MAARSPPSPHPSPPARQLGPRSPRVGRGAEVHAMRSEASGFAGAAREVVADESDKIWVGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MAARSPPSPHPSPPARQLGPRSPRVGRGAEVHAMRSEASGFAGAAREVVADESDKIWVGE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EGSGGRRGPGGAAPAHAPLLSAPMGSRRLEGISVEEAMVTRTQLLEEELSSLKEELALCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EGSGGRRGPGGAAPAHAPLLSAPMGSRRLEGISVEEAMVTRTQLLEEELSSLKEELALCQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 ADKEFVWSLWKRLQVTNPDLTQVVSLVVEREKQKSEAKDRKVLEILQVKDAKIQEFEQRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ADKEFVWSLWKRLQVTNPDLTQVVSLVVEREKQKSEAKDRKVLEILQVKDAKIQEFEQRE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 SVLKQEINDLVKRKIAVDEENAFLRKEFSDLEKKFKDKSQEIKDTKECVQNKEEQNRLVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 SVLKQEINDLVKRKIAVDEENAFLRKEFSDLEKKFKDKSQEIKDTKECVQNKEEQNRLVI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 KNLEEENKKLSTRCTDLLNDLEKLRKQEAHLRKEKYSTDAKIKTFEDNLIEARKEVEVSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KNLEEENKKLSTRCTDLLNDLEKLRKQEAHLRKEKYSTDAKIKTFEDNLIEARKEVEVSQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 SKYNALSLQLSNKQTELIQKDMDITLVRKELQELQNLYKQNSTHTAQQAELIQQLQVLNM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 SKYNALSLQLSNKQTELIQKDMDITLVRKELQELQNLYKQNSTHTAQQAELIQQLQVLNM 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DTQKVLRNQEDVHTAESISYQKLYNELHICFETTKSNEAMLRQSVTNLQDQLLQKEQENA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 DTQKVLRNQEDVHTAESISYQKLYNELHICFETTKSNEAMLRQSVTNLQDQLLQKEQENA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 KLKEKLQESQGAPLPLPQESDPDYSAQVPHRPSLSSLETLMVSQKSEIEYLQEKLKIANE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KLKEKLQESQGAPLPLPQESDPDYSAQVPHRPSLSSLETLMVSQKSEIEYLQEKLKIANE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 KLSENISANKGFSRKSIMTSAEGKHKEPPVKRSRSLSPKSSFTDSEELQKLRKAERKIEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KLSENISANKGFSRKSIMTSAEGKHKEPPVKRSRSLSPKSSFTDSEELQKLRKAERKIEN 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 LEKALQLKSQENDELRDAHEKRKERLQMLQTNYRAVKEQLKQWEEGSGMTEIRKIKRADP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LEKALQLKSQENDELRDAHEKRKERLQMLQTNYRAVKEQLKQWEEGSGMTEIRKIKRADP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 QQLRQEDSDAVWNELAYFKRENQELMIQKMNLEEELDELKVHISIDKAAIQELNRCVAER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 QQLRQEDSDAVWNELAYFKRENQELMIQKMNLEEELDELKVHISIDKAAIQELNRCVAER 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE5 REEQLFRSGEDDEVKRSTPEKNGKEMLEQTLQKVTELENRLKSFEKRSRKLKEGNKKLMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 REEQLFRSGEDDEVKRSTPEKNGKEMLEQTLQKVTELENRLKSFEKRSRKLKEGNKKLMK 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE5 ENDFLKSLLKQQQEDTETREKELEQIIKGSKDVEKENTELQVKISELETEVTSLRRQVAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ENDFLKSLLKQQQEDTETREKELEQIIKGSKDVEKENTELQVKISELETEVTSLRRQVAE 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE5 ANALRNENEELINPMEKSHQSADRAKSEMATMKVRSGRYDCKTTMTKVKFKAAKKNCSVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ANALRNENEELINPMEKSHQSADRAKSEMATMKVRSGRYDCKTTMTKVKFKAAKKNCSVG 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE5 RHHTVLNHSIKVMSNVFENLSKDGWEDVSESSSDSEAQTSQTLGTIIVETSQKISPTEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 RHHTVLNHSIKVMSNVFENLSKDGWEDVSESSSDSEAQTSQTLGTIIVETSQKISPTEDG 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE5 KDQKESDPTEDSQTQGKEIVQTYLNIDGKTPKDYFHDKNAKKPTFQKKNCKMQKSSHTAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KDQKESDPTEDSQTQGKEIVQTYLNIDGKTPKDYFHDKNAKKPTFQKKNCKMQKSSHTAV 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE5 PTRVNREKYKNITAQKSSSNIILLRERIISLQQQNSVLQNAKKTAELSVKEYKEVNEKLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PTRVNREKYKNITAQKSSSNIILLRERIISLQQQNSVLQNAKKTAELSVKEYKEVNEKLL 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE5 HQQQVSDQRFQTSRQTIKKLNLDLAGLRKEKEDLLKKLESSSEITSLAEENSQVTFPRIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 HQQQVSDQRFQTSRQTIKKLNLDLAGLRKEKEDLLKKLESSSEITSLAEENSQVTFPRIQ 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE5 VTSLSPSRSMDLEMKQLQYKLKNATNELTKQSSNVKTLKFELLAKEEHIKEMHEKISRME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VTSLSPSRSMDLEMKQLQYKLKNATNELTKQSSNVKTLKFELLAKEEHIKEMHEKISRME 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KE5 RDITMKRHLIEDLKFRQKVNLESNKSFSEMLQNLDKKVKTLTEECSNKKVSIDSLKQRLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 RDITMKRHLIEDLKFRQKVNLESNKSFSEMLQNLDKKVKTLTEECSNKKVSIDSLKQRLN 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KE5 VAVKEKSQYEQMYQKSKEELEKKDLKLTLLVSRISETESAMAEIETAASKQLQELALQSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VAVKEKSQYEQMYQKSKEELEKKDLKLTLLVSRISETESAMAEIETAASKQLQELALQSE 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KE5 QVLEGAQKTLLLANEKVEEFTTFVKALAKELQNDVHVVRRQIRELKKMKKNRDACKTSTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 QVLEGAQKTLLLANEKVEEFTTFVKALAKELQNDVHVVRRQIRELKKMKKNRDACKTSTH 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KE5 KAQTLAASILNISRSDLEEILDTEDQVEIEKTKIDAENDKEWMLYIQKLLEGQLPFASYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KAQTLAASILNISRSDLEEILDTEDQVEIEKTKIDAENDKEWMLYIQKLLEGQLPFASYL 1330 1340 1350 1360 1370 1380 1390 1400 pF1KE5 LEAVLEKINEKKKLVEGYFTIMKDIR :::::::::::::::::::::::::: CCDS43 LEAVLEKINEKKKLVEGYFTIMKDIR 1390 1400 >>CCDS47953.1 CNTLN gene_id:54875|Hs108|chr9 (391 aa) initn: 2427 init1: 2427 opt: 2429 Z-score: 1257.6 bits: 243.3 E(32554): 1e-63 Smith-Waterman score: 2429; 98.2% identity (98.5% similar) in 391 aa overlap (1-391:1-385) 10 20 30 40 50 60 pF1KE5 MAARSPPSPHPSPPARQLGPRSPRVGRGAEVHAMRSEASGFAGAAREVVADESDKIWVGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MAARSPPSPHPSPPARQLGPRSPRVGRGAEVHAMRSEASGFAGAAREVVADESDKIWVGE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EGSGGRRGPGGAAPAHAPLLSAPMGSRRLEGISVEEAMVTRTQLLEEELSSLKEELALCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 EGSGGRRGPGGAAPAHAPLLSAPMGSRRLEGISVEEAMVTRTQLLEEELSSLKEELALCQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 ADKEFVWSLWKRLQVTNPDLTQVVSLVVEREKQKSEAKDRKVLEILQVKDAKIQEFEQRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ADKEFVWSLWKRLQVTNPDLTQVVSLVVEREKQKSEAKDRKVLEILQVKDAKIQEFEQRE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 SVLKQEINDLVKRKIAVDEENAFLRKEFSDLEKKFKDKSQEIKDTKECVQNKEEQNRLVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SVLKQEINDLVKRKIAVDEENAFLRKEFSDLEKKFKDKSQEIKDTKECVQNKEEQNRLVI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 KNLEEENKKLSTRCTDLLNDLEKLRKQEAHLRKEKYSTDAKIKTFEDNLIEARKEVEVSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 KNLEEENKKLSTRCTDLLNDLEKLRKQEAHLRKEKYSTDAKIKTFEDNLIEARKEVEVSQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 SKYNALSLQLSNKQTELIQKDMDITLVRKELQELQNLYKQNSTHTAQQAELIQQLQVLNM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SKYNALSLQLSNKQTELIQKDMDITLVRKELQELQNLYKQNSTHTAQQAELIQQLQVLNM 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DTQKVLRNQEDVHTAESISYQKLYNELHICFETTKSNEAMLRQSVTNLQDQLLQKEQENA :::::::::::::::::::::: .:: CCDS47 DTQKVLRNQEDVHTAESISYQK------VCFYSVIKM 370 380 390 430 440 450 460 470 480 pF1KE5 KLKEKLQESQGAPLPLPQESDPDYSAQVPHRPSLSSLETLMVSQKSEIEYLQEKLKIANE 1406 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 06:47:01 2016 done: Tue Nov 8 06:47:02 2016 Total Scan time: 5.590 Total Display time: 0.090 Function used was FASTA [36.3.4 Apr, 2011]