FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5012, 1001 aa 1>>>pF1KE5012 1001 - 1001 aa - 1001 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.0337+/-0.00131; mu= 0.6844+/- 0.079 mean_var=300.7612+/-63.068, 0's: 0 Z-trim(108.6): 75 B-trim: 138 in 1/52 Lambda= 0.073954 statistics sampled from 10284 (10340) to 10284 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.642), E-opt: 0.2 (0.318), width: 16 Scan time: 4.100 The best scores are: opt bits E(32554) CCDS43755.1 RBM12B gene_id:389677|Hs108|chr8 (1001) 7100 772.5 0 >>CCDS43755.1 RBM12B gene_id:389677|Hs108|chr8 (1001 aa) initn: 7100 init1: 7100 opt: 7100 Z-score: 4112.6 bits: 772.5 E(32554): 0 Smith-Waterman score: 7100; 100.0% identity (100.0% similar) in 1001 aa overlap (1-1001:1-1001) 10 20 30 40 50 60 pF1KE5 MAVVIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGEIGEAFIIFATDEDARRAISRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MAVVIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGEIGEAFIIFATDEDARRAISRS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSGTSGVDSLSNFIESVKEEASNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 GGFIKDSSVELFLSSKAEMQKTIEMKRTDRVGRGRPGSGTSGVDSLSNFIESVKEEASNS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 GYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 GYGSSINQDAGFHTNGTGHGNLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 DGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFGGNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 DGVIFLKHHDGRNNGDAIVKFASCVDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFGGNA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 VKEGDVLRRSEEHSPPRGINDRHFRKRSHSKSPRRTRSRSPLGFYVHLKNLSLSIDERDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VKEGDVLRRSEEHSPPRGINDRHFRKRSHSKSPRRTRSRSPLGFYVHLKNLSLSIDERDL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 RNFFRGTDLTDEQIRFLYKDENRTRYAFVMFKTLKDYNTALSLHKTVLQYRPVHIDPISR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 RNFFRGTDLTDEQIRFLYKDENRTRYAFVMFKTLKDYNTALSLHKTVLQYRPVHIDPISR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 KQMLKFIARYEKKRSGSLERDRPGHVSQKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KQMLKFIARYEKKRSGSLERDRPGHVSQKYSQEGNSGQKLCIYIRNFPFDVTKVEVQKFF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 ADFLLAEDDIYLLYDDKGVGLGEALVKFKSEEQAMKAERLNRRRFLGTEVLLRLISEAQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ADFLLAEDDIYLLYDDKGVGLGEALVKFKSEEQAMKAERLNRRRFLGTEVLLRLISEAQI 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 QEFGVNFSVMSSEKMQARSQSRERGDHSHLFDSKDPPIYSVGAFENFRHQLEDLRQLDNF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 QEFGVNFSVMSSEKMQARSQSRERGDHSHLFDSKDPPIYSVGAFENFRHQLEDLRQLDNF 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 KHPQRDFRQPDRHPPEDFRHSSEDFRFPPEDFRHSPEDFRRPREEDFRRPSEEDFRRPWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KHPQRDFRQPDRHPPEDFRHSSEDFRFPPEDFRHSPEDFRRPREEDFRRPSEEDFRRPWE 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 EDFRRPPEDDFRHPREEDWRRPLEEDWRRPLEEDFRRSPTEDFRQLPEEDFRQPPEEDLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EDFRRPPEDDFRHPREEDWRRPLEEDWRRPLEEDFRRSPTEDFRQLPEEDFRQPPEEDLR 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE5 WLPEEDFRRPPEEDWRRPPEEDFRRPLQGEWRRPPEDDFRRPPEEDFRHSPEEDFRQSPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 WLPEEDFRRPPEEDWRRPPEEDFRRPLQGEWRRPPEDDFRRPPEEDFRHSPEEDFRQSPQ 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE5 EHFRRPPQEHFRRPPPEHFRRPPPEHFRRPPPEHFRRPPPEHFRRPPPEHFRRPPPEHFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EHFRRPPQEHFRRPPPEHFRRPPPEHFRRPPPEHFRRPPPEHFRRPPPEHFRRPPPEHFR 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE5 RPPQEHFRRPPQEHFRRSREEDFRHPPDEDFRGPPDEDFRHPPDEDFRSPQEEDFRCPSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 RPPQEHFRRPPQEHFRRSREEDFRHPPDEDFRGPPDEDFRHPPDEDFRSPQEEDFRCPSD 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE5 EDFRQLPEEDLREAPEEDPRLPDNFRPPGEDFRSPPDDFRSHRPFVNFGRPEGGKFDFGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EDFRQLPEEDLREAPEEDPRLPDNFRPPGEDFRSPPDDFRSHRPFVNFGRPEGGKFDFGK 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE5 HNMGSFPEGRFMPDPKINCGSGRVTPIKIMNLPFKANVNEILDFFHGYRIIPDSVSIQYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 HNMGSFPEGRFMPDPKINCGSGRVTPIKIMNLPFKANVNEILDFFHGYRIIPDSVSIQYN 910 920 930 940 950 960 970 980 990 1000 pF1KE5 EQGLPTGEAIVAMINYNEAMAAIKDLNDRPVGPRKVKLTLL ::::::::::::::::::::::::::::::::::::::::: CCDS43 EQGLPTGEAIVAMINYNEAMAAIKDLNDRPVGPRKVKLTLL 970 980 990 1000 1001 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:08:40 2016 done: Tue Nov 8 04:08:41 2016 Total Scan time: 4.100 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]