FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5727, 707 aa 1>>>pF1KE5727 707 - 707 aa - 707 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.9136+/-0.000423; mu= -1.5142+/- 0.026 mean_var=693.2394+/-168.840, 0's: 0 Z-trim(124.2): 159 B-trim: 2665 in 1/58 Lambda= 0.048712 statistics sampled from 44963 (45441) to 44963 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.802), E-opt: 0.2 (0.533), width: 16 Scan time: 14.120 The best scores are: opt bits E(85289) NP_067633 (OMIM: 616741) PR domain zinc finger pro ( 707) 5006 367.5 9.7e-101 >>NP_067633 (OMIM: 616741) PR domain zinc finger protein (707 aa) initn: 5006 init1: 5006 opt: 5006 Z-score: 1929.6 bits: 367.5 E(85289): 9.7e-101 Smith-Waterman score: 5006; 100.0% identity (100.0% similar) in 707 aa overlap (1-707:1-707) 10 20 30 40 50 60 pF1KE5 MHGAARAPATSVSADCCIPAGLRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_067 MHGAARAPATSVSADCCIPAGLRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDES 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GGSPLEWIGLIRAARNSQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_067 GGSPLEWIGLIRAARNSQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 IPTTATPTHDEKGEERYICWYCWRTFRYPNSLKAHLRFHCVFSGGGGGAFLHHEHAARQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_067 IPTTATPTHDEKGEERYICWYCWRTFRYPNSLKAHLRFHCVFSGGGGGAFLHHEHAARQG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 AVPAADGLGLSPKPPAPDFAAPSQAGTLRPHPLGPPPVQACGAREGIKREASSAPSATSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_067 AVPAADGLGLSPKPPAPDFAAPSQAGTLRPHPLGPPPVQACGAREGIKREASSAPSATSP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 TPGKWGQPKKGKEQLDRALDMSGAARGQGHFLGIVGGSSAGVGSLAFYPGVRSAFKPAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_067 TPGKWGQPKKGKEQLDRALDMSGAARGQGHFLGIVGGSSAGVGSLAFYPGVRSAFKPAGL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 ARAAAAAHGDPYREESSSKQGAGLALGRLLGGGRACGRPGSGENSAAGGAGHHHHHHAHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_067 ARAAAAAHGDPYREESSSKQGAGLALGRLLGGGRACGRPGSGENSAAGGAGHHHHHHAHH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 HHHPKCLLAGDPPPPPPPGLPCSGALRGFPLLSVPPEEASAFKHVERAPPAAAALPGARY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_067 HHHPKCLLAGDPPPPPPPGLPCSGALRGFPLLSVPPEEASAFKHVERAPPAAAALPGARY 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 AQLPPAPGLPLERCALPPLDPGGLKAYPGGECSHLPAVMPAFTVYNGELLYGSPATTAYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_067 AQLPPAPGLPLERCALPPLDPGGLKAYPGGECSHLPAVMPAFTVYNGELLYGSPATTAYY 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 PLKLHFGGLLKYPESISYFSGPAAAALSPAELGSLASIDREIAMHNQQLSEMAAGKGRGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_067 PLKLHFGGLLKYPESISYFSGPAAAALSPAELGSLASIDREIAMHNQQLSEMAAGKGRGR 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 LDSGTLPPAVAAAGGTGGGGSGGSGAGKPKTGHLCLYCGKLYSRKYGLKIHMRTHTGYKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_067 LDSGTLPPAVAAAGGTGGGGSGGSGAGKPKTGHLCLYCGKLYSRKYGLKIHMRTHTGYKP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 LKCKVCLRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSLLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_067 LKCKVCLRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSLLA 610 620 630 640 650 660 670 680 690 700 pF1KE5 KAGDGPGAEPGYPPEPGDPKSDDSDVDVCFTDDQSDPEVGGGGERDL ::::::::::::::::::::::::::::::::::::::::::::::: NP_067 KAGDGPGAEPGYPPEPGDPKSDDSDVDVCFTDDQSDPEVGGGGERDL 670 680 690 700 707 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 06:07:27 2016 done: Tue Nov 8 06:07:29 2016 Total Scan time: 14.120 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]