Result of FASTA (ccds) for
pFN21AE1907
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1907, 442 aa
1>>>pF1KE1907 442 - 442 aa - 442 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5885+/-0.000854; mu= 16.1411+/- 0.051
mean_var=80.8874+/-16.353, 0's: 0 Z-trim(107.4): 84 B-trim: 68 in 1/48
Lambda= 0.142605
statistics sampled from 9478 (9563) to 9478 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.663), E-opt: 0.2 (0.294), width: 16
Scan time: 3.130
The best scores are: opt bits E(32554)
CCDS43437.1 F gene_id:3134|Hs108|chr6 ( 442) 3030 633.2 1.5e-181
CCDS43438.1 F gene_id:3134|Hs108|chr6 ( 346) 2353 493.9 1.1e-139
CCDS34373.1 A gene_id:3105|Hs108|chr6 ( 365) 1930 406.9 1.7e-113
CCDS34394.1 B gene_id:3106|Hs108|chr6 ( 362) 1886 397.8 9.2e-111
CCDS4668.1 G gene_id:3135|Hs108|chr6 ( 338) 1847 389.8 2.3e-108
CCDS34393.1 C gene_id:3107|Hs108|chr6 ( 366) 1832 386.7 2.1e-107
CCDS34379.1 E gene_id:3133|Hs108|chr6 ( 358) 1732 366.1 3.1e-101
CCDS43439.1 F gene_id:3134|Hs108|chr6 ( 254) 1380 293.6 1.5e-79
CCDS1342.1 MR1 gene_id:3140|Hs108|chr1 ( 341) 773 168.8 7.5e-42
CCDS4578.1 HFE gene_id:3077|Hs108|chr6 ( 348) 715 156.9 3e-38
CCDS75412.1 HFE gene_id:3077|Hs108|chr6 ( 337) 707 155.2 9.1e-38
CCDS47387.1 HFE gene_id:3077|Hs108|chr6 ( 325) 668 147.2 2.3e-35
CCDS5680.1 AZGP1 gene_id:563|Hs108|chr7 ( 298) 652 143.9 2.1e-34
CCDS4580.1 HFE gene_id:3077|Hs108|chr6 ( 260) 572 127.4 1.7e-29
CCDS12770.1 FCGRT gene_id:2217|Hs108|chr19 ( 365) 505 113.7 3.1e-25
CCDS56412.1 MICA gene_id:100507436|Hs108|chr6 ( 332) 501 112.8 5.1e-25
CCDS53440.1 MR1 gene_id:3140|Hs108|chr1 ( 249) 480 108.4 8.2e-24
CCDS53441.1 MR1 gene_id:3140|Hs108|chr1 ( 214) 474 107.2 1.7e-23
CCDS43449.1 MICB gene_id:4277|Hs108|chr6 ( 383) 476 107.7 2e-23
CCDS75423.1 MICB gene_id:4277|Hs108|chr6 ( 351) 442 100.7 2.4e-21
CCDS53442.1 MR1 gene_id:3140|Hs108|chr1 ( 296) 439 100.1 3.2e-21
CCDS4581.1 HFE gene_id:3077|Hs108|chr6 ( 168) 398 91.5 7.1e-19
CCDS4579.1 HFE gene_id:3077|Hs108|chr6 ( 256) 395 91.0 1.5e-18
CCDS75421.1 MICA gene_id:100507436|Hs108|chr6 ( 235) 389 89.7 3.4e-18
CCDS47386.1 HFE gene_id:3077|Hs108|chr6 ( 242) 365 84.8 1.1e-16
CCDS54975.1 HFE gene_id:3077|Hs108|chr6 ( 246) 363 84.4 1.4e-16
CCDS54974.1 HFE gene_id:3077|Hs108|chr6 ( 334) 363 84.5 1.8e-16
CCDS75422.1 MICB gene_id:4277|Hs108|chr6 ( 340) 319 75.4 9.8e-14
CCDS1174.1 CD1A gene_id:909|Hs108|chr1 ( 327) 301 71.7 1.2e-12
>>CCDS43437.1 F gene_id:3134|Hs108|chr6 (442 aa)
initn: 3030 init1: 3030 opt: 3030 Z-score: 3372.8 bits: 633.2 E(32554): 1.5e-181
Smith-Waterman score: 3030; 99.8% identity (99.8% similar) in 442 aa overlap (1-442:1-442)
10 20 30 40 50 60
pF1KE1 MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 GCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEFRTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEFRTY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATLRCWALGFYPAEITLTWQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATLRCWALGFYPAEITLTWQR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 DGEEQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPQPLILRWEQSPQ
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS43 DGEEQTQDTELVETRPAGDGTFQKWAAVVVPPGEEQRYTCHVQHEGLPQPLILRWEQSPQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 PTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAAAYSVVSGNLMITWWS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAAAYSVVSGNLMITWWS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE1 SLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGFGFRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGFGFRR
370 380 390 400 410 420
430 440
pF1KE1 GRSFLLRSWHHLMKRVQIKIFD
::::::::::::::::::::::
CCDS43 GRSFLLRSWHHLMKRVQIKIFD
430 440
>>CCDS43438.1 F gene_id:3134|Hs108|chr6 (346 aa)
initn: 2353 init1: 2353 opt: 2353 Z-score: 2621.5 bits: 493.9 E(32554): 1.1e-139
Smith-Waterman score: 2353; 99.7% identity (99.7% similar) in 345 aa overlap (1-345:1-345)
10 20 30 40 50 60
pF1KE1 MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 GCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEFRTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEFRTY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATLRCWALGFYPAEITLTWQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATLRCWALGFYPAEITLTWQR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 DGEEQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPQPLILRWEQSPQ
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS43 DGEEQTQDTELVETRPAGDGTFQKWAAVVVPPGEEQRYTCHVQHEGLPQPLILRWEQSPQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 PTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAAAYSVVSGNLMITWWS
:::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAAV
310 320 330 340
370 380 390 400 410 420
pF1KE1 SLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGFGFRR
>>CCDS34373.1 A gene_id:3105|Hs108|chr6 (365 aa)
initn: 1956 init1: 1930 opt: 1930 Z-score: 2150.9 bits: 406.9 E(32554): 1.7e-113
Smith-Waterman score: 1930; 79.0% identity (91.5% similar) in 353 aa overlap (1-353:4-356)
10 20 30 40 50
pF1KE1 MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRF
::::.::::::::::::.:::::::.::: :.::::::::::.::: :::::::.::
CCDS34 MAVMAPRTLLLLLSGALALTQTWAGSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DSDAAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQ
::::: ::::: ::.:::::.::. : .::..::::: : .: ::::::::::.:
CCDS34 DSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 GMNGCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEF
: :::.: :::.::::.: ::::::::.:::::::::::: .::::.: .:: . ::..
CCDS34 IMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 RTYLEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATLRCWALGFYPAEITLT
:.::.: :.: ::::::::::::::.::::.:..::::::::::::::::::::::::::
CCDS34 RAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEATLRCWALGFYPAEITLT
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 WQRDGEEQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPQPLILRWEQ
::::::.::::::::::::::::::::::::::::::::::::::::::::.:: ::::
CCDS34 WQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEL
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE1 SPQPTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAAAYSVVSGNLMIT
: :::::::::.::::.::::.:::::::::::.:::::. :::.:::. . ..:.
CCDS34 SSQPTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRKGGSYTQAASSDSAQGSDVSL
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE1 WWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGFG
CCDS34 TACKV
>>CCDS34394.1 B gene_id:3106|Hs108|chr6 (362 aa)
initn: 1882 init1: 1882 opt: 1886 Z-score: 2102.0 bits: 397.8 E(32554): 9.2e-111
Smith-Waterman score: 1886; 78.5% identity (90.4% similar) in 353 aa overlap (1-353:4-356)
10 20 30 40 50
pF1KE1 MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRF
::::..:::::.:::::.:::::::.::: :.::::::::::.:.: :::::::.::
CCDS34 MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DSDAAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQ
::::: :: ::: ::.:::::.::. .: ::.::::: .:::: ::::::::::::
CCDS34 DSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 GMNGCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEF
.: :::.:::::::::. :.::::::::.:::::::::::::.:::::: .:: . ::.
CCDS34 SMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 RTYLEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATLRCWALGFYPAEITLT
:.::::::.: :::::::::. :.::::::.::.::::::::::::::::::::::::::
CCDS34 RAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLT
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 WQRDGEEQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPQPLILRWEQ
::::::.::::::::::::::: ::::::::::::::::::::::::::::.:: ::::
CCDS34 WQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE1 SPQPTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAAAYSVVSGNLMIT
: : :.:::::::::.::..:: :::::::: :.::: . ::::::: . ..:.
CCDS34 SSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSYSQAACSDSAQGSDVSL
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE1 WWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGFG
CCDS34 TA
>>CCDS4668.1 G gene_id:3135|Hs108|chr6 (338 aa)
initn: 1847 init1: 1847 opt: 1847 Z-score: 2059.1 bits: 389.8 E(32554): 2.3e-108
Smith-Waterman score: 1847; 79.4% identity (92.2% similar) in 335 aa overlap (1-335:4-338)
10 20 30 40 50
pF1KE1 MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRF
::::.:.:::::::.::.:::::::.::::.:::::::::::.::. :::::::.::
CCDS46 MVVMAPRTLFLLLSGALTLTETWAGSHSMRYFSAAVSRPGRGEPRFIAMGYVDDTQFVRF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DSDAAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQ
:::.: :::::: ::::::::.::: : .::.:::::. :..: ::::::.:::::
CCDS46 DSDSACPRMEPRAPWVEQEGPEYWEEETRNTKAHAQTDRMNLQTLRGYYNQSEASSHTLQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 GMNGCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEF
: :::.: ::::::::.:.:::::::..:::::::::::::.:::..: :: . ::.
CCDS46 WMIGCDLGSDGRLLRGYEQYAYDGKDYLALNEDLRSWTAADTAAQISKRKCEAANVAEQR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 RTYLEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATLRCWALGFYPAEITLT
:.:::: :.: :.:::::::: ::::::::.::.:::. :.:::::::::::::::: ::
CCDS46 RAYLEGTCVEWLHRYLENGKEMLQRADPPKTHVTHHPVFDYEATLRCWALGFYPAEIILT
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 WQRDGEEQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPQPLILRWEQ
::::::.::::.:::::::::::::::::::::::::::::::::::::::.::.:::.:
CCDS46 WQRDGEDQTQDVELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLMLRWKQ
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE1 SPQPTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAAAYSVVSGNLMIT
: :::::.:::::::::.::::::.::::.:::::::
CCDS46 SSLPTIPIMGIVAGLVVLAAVVTGAAVAAVLWRKKSSD
310 320 330
360 370 380 390 400 410
pF1KE1 WWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGFG
>>CCDS34393.1 C gene_id:3107|Hs108|chr6 (366 aa)
initn: 1949 init1: 1783 opt: 1832 Z-score: 2041.9 bits: 386.7 E(32554): 2.1e-107
Smith-Waterman score: 1832; 76.8% identity (88.7% similar) in 354 aa overlap (1-353:4-357)
10 20 30 40 50
pF1KE1 MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRF
::::.:::::::.::::.::: :::.:::.::::::::::::.:.: :::::::.::
CCDS34 MRVMAPRALLLLLSGGLALTETWACSHSMRYFDTAVSRPGRGEPRFISVGYVDDTQFVRF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DSDAAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQ
::::: :: ::: ::::::::.::. : : .::.:::.:::: ::::: ::::::
CCDS34 DSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRNLRGYYNQSEDGSHTLQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 GMNGCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEF
:.:::.:::::::::: : ::::::::.:::::::::::::.:::::: :: . ::..
CCDS34 RMSGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKLEAARAAEQL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 RTYLEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATLRCWALGFYPAEITLT
:.:::: :.: :::::::::::::::.:::.::.:::.::::::::::::::::::::::
CCDS34 RAYLEGTCVEWLRRYLENGKETLQRAEPPKTHVTHHPLSDHEATLRCWALGFYPAEITLT
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 WQRDGEEQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPQPLILRWEQ
::::::.:::::::::::::::::::::::::::::.:::::::.::::: .:: : ::
CCDS34 WQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHMQHEGLQEPLTLSWEP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE1 SPQPTIPIVGIVAGLVVLGAV-VTGAVVAAVMWRKKSSDRNRGSYSQAAAYSVVSGNLMI
: ::::::.::::::.:: .. : ::::.:.: :.::: . :: :::: . ..:.
CCDS34 SSQPTIPIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSSGGKGGSCSQAACSNSAQGSDES
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE1 TWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF
CCDS34 LITCKA
>>CCDS34379.1 E gene_id:3133|Hs108|chr6 (358 aa)
initn: 1790 init1: 1724 opt: 1732 Z-score: 1930.8 bits: 366.1 E(32554): 3.1e-101
Smith-Waterman score: 1732; 72.3% identity (87.6% similar) in 354 aa overlap (1-353:1-353)
10 20 30 40 50 60
pF1KE1 MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSD
:. .:::::: :::::.::::::::.:: :.::::::::::.:.: :::::::.:::.:
CCDS34 MVDGTLLLLLSEALALTQTWAGSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDND
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMN
:: ::: :: ::.:::: .::. : :. .:: :: ::.: :::::::::::: :.
CCDS34 AASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMH
70 80 90 100 110 120
130 140 150 160 170
pF1KE1 GCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQIT-QRFYEAEEYAEEFRT
::..:::::.::::.: :::::::..::::::::::.::.:::. :. .: : ::. :.
CCDS34 GCELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASE-AEHQRA
130 140 150 160 170
180 190 200 210 220 230
pF1KE1 YLEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATLRCWALGFYPAEITLTWQ
::: :.: :..:::.::::: . .:::.::.::::::::::::::::::::::::::::
CCDS34 YLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 RDGEEQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPQPLILRWEQSP
.::: .:::::::::::::::::::::::::::::::::::::::::::.:. :::. .
CCDS34 QDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPAS
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE1 QPTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAAAYSVVSGNLMITWW
:::::::::.::::.::.::.:::::::.:::::: . ::::.: . ..:.
CCDS34 QPTIPIVGIIAGLVLLGSVVSGAVVAAVIWRKKSSGGKGGSYSKAEWSDSAQGSESHSL
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE1 SSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGFGFR
>>CCDS43439.1 F gene_id:3134|Hs108|chr6 (254 aa)
initn: 1380 init1: 1380 opt: 1380 Z-score: 1541.6 bits: 293.6 E(32554): 1.5e-79
Smith-Waterman score: 1499; 73.3% identity (73.3% similar) in 345 aa overlap (1-345:1-253)
10 20 30 40 50 60
pF1KE1 MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDSD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQGMN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 GCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEFRTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEFRTY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 LEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATLRCWALGFYPAEITLTWQR
:::::::::::::::::::::::
CCDS43 LEGECLELLRRYLENGKETLQRA-------------------------------------
190 200
250 260 270 280 290 300
pF1KE1 DGEEQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPQPLILRWEQSPQ
:::::
CCDS43 -------------------------------------------------------EQSPQ
310 320 330 340 350 360
pF1KE1 PTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAAAYSVVSGNLMITWWS
:::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAAV
210 220 230 240 250
370 380 390 400 410 420
pF1KE1 SLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGFGFRR
>>CCDS1342.1 MR1 gene_id:3140|Hs108|chr1 (341 aa)
initn: 609 init1: 368 opt: 773 Z-score: 864.9 bits: 168.8 E(32554): 7.5e-42
Smith-Waterman score: 773; 38.4% identity (66.9% similar) in 341 aa overlap (5-341:6-335)
10 20 30 40 50
pF1KE1 MAPRSLLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLRFDS
..:: : .: . . . .:::::: .:: : .: :..:.: :::. . .::
CCDS13 MGELMAFLLPLIIVLMVKHSDSRTHSLRYFRLGVSDPIHGVPEFISVGYVDSHPITTYDS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DAAIPRM-EPREPWV-EQEGPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHTLQ
. :. ::: ::. :. .:..:: : .. : .: :. : :.::.: :::: :
CCDS13 ---VTRQKEPRAPWMAENLAPDHWERYTQLLRGWQQMFKVELKRLQRHYNHS--GSHTYQ
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 GMNGCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEYAEEF
: ::.. :: :. :.::::.:.. .:.: :: :.:.::. .. .::... .
CCDS13 RMIGCELLEDGSTT-GFLQYAYDGQDFLIFNKDTLSWLAVDNVAHTIKQAWEANQHELLY
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 -RTYLEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATLRCWALGFYPAEITL
...:: ::. :.:.:: ::.::::..:: ..: .. ..: : : :::: :: .
CCDS13 QKNWLEEECIAWLKRFLEYGKDTLQRTEPPLVRVNRKETFPGVTALFCKAHGFYPPEIYM
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 TWQRDGEEQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPQPLILRWE
::...::: .:. . . :.::::.: ::.. . . :.:::.: :. ..:.
CCDS13 TWMKNGEEIVQEIDYGDILPSGDGTYQAWASIELDPQSSNLYSCHVEHCGV--HMVLQVP
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE1 QSPQPTIPIV-GIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAAAYSVVSGNLM
: . :::.: :.: .:: :..: :....::.. ..: . :
CCDS13 QESE-TIPLVMKAVSGSIVLVIVLAG--VGVLVWRRRPREQNGAIYLPTPDR
300 310 320 330 340
360 370 380 390 400 410
pF1KE1 ITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFG
>>CCDS4578.1 HFE gene_id:3077|Hs108|chr6 (348 aa)
initn: 499 init1: 293 opt: 715 Z-score: 800.2 bits: 156.9 E(32554): 3e-38
Smith-Waterman score: 715; 35.4% identity (65.2% similar) in 353 aa overlap (1-344:1-345)
10 20 30 40 50
pF1KE1 MAPRS----LLLLLSGALALTDTWAGSHSLRYFSTAVSRPGRGEPRYIAVEYVDDTQFLR
:.::. :::.: . .: ::::.:. ..:. : . :. :::: :.
CCDS45 MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 FDSDAAIPRMEPREPWVEQE-GPQYWEWTTGYAKANAQTDRVALRNLLRRYNQSEAGSHT
.: .. :.::: ::: .. . :.: . :. . : . .... .:.:. :::
CCDS45 YDHESR--RVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKE-SHT
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 LQGMNGCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEAEEY-A
:: . ::.: :. .:: ...:::.:.. . : .: ::. : :. .: .. :
CCDS45 LQVILGCEMQEDNST-EGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRA
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 EEFRTYLEGECLELLRRYLENGKETLQRADPPKAHVAHHPISDHEATLRCWALGFYPAEI
.. :.::: .: :.. :: :. .:.. :: ..:.:: ... .:::: ::..:: .:
CCDS45 RQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHH-VTSSVTTLRCRALNYYPQNI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE1 TLTWQRDGEEQTQDTELVETR---PAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPQPL
:. : .: .: .:.. : . : ::::.: : ...:: ::::::::.:.: :: :::
CCDS45 TMKWLKD--KQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYTCQVEHPGLDQPL
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE1 ILRWEQSPQPTIPIVGIVAGLVVLGAVVTGAVVAAVMWRKKSSDRNRGSYSQAAAYSVVS
:. :: ::. :. ..:...:..:. ... ... .. ....: : : :
CCDS45 IVIWEPSPSGTL-VIGVISGIAVFVVILFIGILFIILRKRQGSRGAMGHYVLAERE
300 310 320 330 340
360 370 380 390 400 410
pF1KE1 GNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQS
442 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 10:57:23 2016 done: Sun Nov 6 10:57:24 2016
Total Scan time: 3.130 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]