FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1630, 147 aa 1>>>pF1KE1630 147 - 147 aa - 147 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9513+/-0.000553; mu= 13.7437+/- 0.034 mean_var=61.6172+/-12.275, 0's: 0 Z-trim(112.8): 69 B-trim: 0 in 0/51 Lambda= 0.163389 statistics sampled from 13478 (13549) to 13478 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.792), E-opt: 0.2 (0.416), width: 16 Scan time: 1.780 The best scores are: opt bits E(32554) CCDS43369.1 UBE2D2 gene_id:7322|Hs108|chr5 ( 147) 1039 252.3 7.6e-68 CCDS3660.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 147) 1016 246.9 3.3e-66 CCDS3661.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 148) 1012 246.0 6.3e-66 CCDS5474.1 UBE2D4 gene_id:51619|Hs108|chr7 ( 147) 987 240.1 3.7e-64 CCDS3659.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 149) 983 239.1 7.3e-64 CCDS7252.1 UBE2D1 gene_id:7321|Hs108|chr10 ( 147) 955 232.5 7e-62 CCDS47275.1 UBE2D2 gene_id:7322|Hs108|chr5 ( 118) 835 204.2 1.9e-53 CCDS75172.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 118) 827 202.3 7.1e-53 CCDS73139.1 UBE2D1 gene_id:7321|Hs108|chr10 ( 109) 700 172.4 6.8e-44 CCDS2282.1 UBE2E3 gene_id:10477|Hs108|chr2 ( 207) 668 165.0 2.1e-41 CCDS2638.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 193) 663 163.8 4.6e-41 CCDS2637.1 UBE2E2 gene_id:7325|Hs108|chr3 ( 201) 663 163.8 4.7e-41 CCDS56244.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 160) 657 162.3 1e-40 CCDS2639.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 176) 581 144.4 2.8e-35 CCDS31875.1 UBE2N gene_id:7334|Hs108|chr12 ( 152) 460 115.9 9.6e-27 CCDS14580.1 UBE2A gene_id:7319|Hs108|chrX ( 152) 440 111.2 2.5e-25 CCDS4174.1 UBE2B gene_id:7320|Hs108|chr5 ( 152) 434 109.7 6.7e-25 CCDS1425.1 UBE2T gene_id:29089|Hs108|chr1 ( 197) 432 109.3 1.1e-24 CCDS33976.1 UBE2K gene_id:3093|Hs108|chr4 ( 200) 405 103.0 9.5e-23 CCDS13790.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 154) 399 101.5 2.1e-22 CCDS58795.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 212) 389 99.2 1.4e-21 CCDS78500.1 UBE2A gene_id:7319|Hs108|chrX ( 119) 377 96.2 6.1e-21 CCDS33114.1 UBE2S gene_id:27338|Hs108|chr19 ( 222) 374 95.7 1.6e-20 CCDS58796.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 122) 360 92.2 1e-19 CCDS7960.1 UBE2L6 gene_id:9246|Hs108|chr11 ( 153) 359 92.1 1.4e-19 CCDS47043.1 UBE2K gene_id:3093|Hs108|chr4 ( 157) 355 91.1 2.8e-19 CCDS10433.1 UBE2I gene_id:7329|Hs108|chr16 ( 158) 349 89.7 7.4e-19 CCDS13370.1 UBE2C gene_id:11065|Hs108|chr20 ( 179) 347 89.3 1.1e-18 CCDS13374.1 UBE2C gene_id:11065|Hs108|chr20 ( 140) 327 84.5 2.4e-17 CCDS12987.1 UBE2M gene_id:9040|Hs108|chr19 ( 183) 327 84.6 3e-17 CCDS627.1 UBE2U gene_id:148581|Hs108|chr1 ( 226) 319 82.7 1.3e-16 CCDS5814.1 UBE2H gene_id:7328|Hs108|chr7 ( 183) 309 80.3 5.8e-16 CCDS13714.1 UBE2G2 gene_id:7327|Hs108|chr21 ( 165) 298 77.7 3.2e-15 CCDS32532.1 UBE2G1 gene_id:7326|Hs108|chr17 ( 170) 297 77.5 3.9e-15 CCDS13372.1 UBE2C gene_id:11065|Hs108|chr20 ( 150) 294 76.7 5.7e-15 CCDS2523.1 UBE2F gene_id:140739|Hs108|chr2 ( 185) 275 72.3 1.5e-13 CCDS63175.1 UBE2F gene_id:140739|Hs108|chr2 ( 161) 268 70.6 4.2e-13 CCDS47874.2 UBE2W gene_id:55284|Hs108|chr8 ( 180) 266 70.2 6.4e-13 CCDS47875.2 UBE2W gene_id:55284|Hs108|chr8 ( 191) 266 70.2 6.7e-13 CCDS47044.1 UBE2K gene_id:3093|Hs108|chr4 ( 149) 257 68.0 2.4e-12 CCDS11540.2 UBE2Z gene_id:65264|Hs108|chr17 ( 354) 249 66.4 1.8e-11 CCDS6546.1 UBE2R2 gene_id:54926|Hs108|chr9 ( 238) 246 65.6 2.1e-11 CCDS33586.1 UBE2G2 gene_id:7327|Hs108|chr21 ( 137) 241 64.2 3e-11 CCDS63177.1 UBE2F gene_id:140739|Hs108|chr2 ( 153) 237 63.3 6.4e-11 CCDS14.1 UBE2J2 gene_id:118424|Hs108|chr1 ( 259) 239 63.9 7.1e-11 CCDS5021.1 UBE2J1 gene_id:51465|Hs108|chr6 ( 318) 238 63.7 9.8e-11 >>CCDS43369.1 UBE2D2 gene_id:7322|Hs108|chr5 (147 aa) initn: 1039 init1: 1039 opt: 1039 Z-score: 1331.5 bits: 252.3 E(32554): 7.6e-68 Smith-Waterman score: 1039; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:1-147) 10 20 30 40 50 60 pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 70 80 90 100 110 120 130 140 pF1KE1 PEIARIYKTDREKYNRIAREWTQKYAM ::::::::::::::::::::::::::: CCDS43 PEIARIYKTDREKYNRIAREWTQKYAM 130 140 >>CCDS3660.1 UBE2D3 gene_id:7323|Hs108|chr4 (147 aa) initn: 1016 init1: 1016 opt: 1016 Z-score: 1302.2 bits: 246.9 E(32554): 3.3e-66 Smith-Waterman score: 1016; 97.3% identity (100.0% similar) in 147 aa overlap (1-147:1-147) 10 20 30 40 50 60 pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY ::::::.:::.::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 70 80 90 100 110 120 130 140 pF1KE1 PEIARIYKTDREKYNRIAREWTQKYAM :::::::::::.:::::.::::::::: CCDS36 PEIARIYKTDRDKYNRISREWTQKYAM 130 140 >>CCDS3661.1 UBE2D3 gene_id:7323|Hs108|chr4 (148 aa) initn: 1012 init1: 1012 opt: 1012 Z-score: 1297.0 bits: 246.0 E(32554): 6.3e-66 Smith-Waterman score: 1012; 96.6% identity (100.0% similar) in 147 aa overlap (1-147:1-147) 10 20 30 40 50 60 pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY ::::::.:::.::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 MALKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 70 80 90 100 110 120 130 140 pF1KE1 PEIARIYKTDREKYNRIAREWTQKYAM :::::::::::.::::.:::::.:::: CCDS36 PEIARIYKTDRDKYNRLAREWTEKYAML 130 140 >>CCDS5474.1 UBE2D4 gene_id:51619|Hs108|chr7 (147 aa) initn: 987 init1: 987 opt: 987 Z-score: 1265.2 bits: 240.1 E(32554): 3.7e-64 Smith-Waterman score: 987; 93.2% identity (98.6% similar) in 147 aa overlap (1-147:1-147) 10 20 30 40 50 60 pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY ::::::.:::.:: :::::::::::::::.:::::::::::::::::::::::::::::: CCDS54 MALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV :::::::::::.::::::::::::::::::::::::::.::::::::::::::::::::: CCDS54 PFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV 70 80 90 100 110 120 130 140 pF1KE1 PEIARIYKTDREKYNRIAREWTQKYAM ::::. ::.:::::::.:::::::::: CCDS54 PEIAHTYKADREKYNRLAREWTQKYAM 130 140 >>CCDS3659.1 UBE2D3 gene_id:7323|Hs108|chr4 (149 aa) initn: 983 init1: 983 opt: 983 Z-score: 1260.0 bits: 239.1 E(32554): 7.3e-64 Smith-Waterman score: 983; 95.8% identity (98.6% similar) in 144 aa overlap (4-147:6-149) 10 20 30 40 50 pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPT : . :::.::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 MLSNRKCLSKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPT 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDP 70 80 90 100 110 120 120 130 140 pF1KE1 LVPEIARIYKTDREKYNRIAREWTQKYAM :::::::::::::.:::::.::::::::: CCDS36 LVPEIARIYKTDRDKYNRISREWTQKYAM 130 140 >>CCDS7252.1 UBE2D1 gene_id:7321|Hs108|chr10 (147 aa) initn: 955 init1: 955 opt: 955 Z-score: 1224.5 bits: 232.5 E(32554): 7e-62 Smith-Waterman score: 955; 89.1% identity (97.3% similar) in 147 aa overlap (1-147:1-147) 10 20 30 40 50 60 pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY ::::::.:::.:: :::::.:::::::::.:::::::::: :: :::::::::.:::::: CCDS72 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV ::::::.::::.::::::::::::::::::::::::::.::::::::::::::::::::: CCDS72 PFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV 70 80 90 100 110 120 130 140 pF1KE1 PEIARIYKTDREKYNRIAREWTQKYAM :.::.:::.:.::::: :::::::::: CCDS72 PDIAQIYKSDKEKYNRHAREWTQKYAM 130 140 >>CCDS47275.1 UBE2D2 gene_id:7322|Hs108|chr5 (118 aa) initn: 835 init1: 835 opt: 835 Z-score: 1073.0 bits: 204.2 E(32554): 1.9e-53 Smith-Waterman score: 835; 100.0% identity (100.0% similar) in 118 aa overlap (30-147:1-118) 10 20 30 40 50 60 pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY ::::::::::::::::::::::::::::::: CCDS47 MFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 10 20 30 70 80 90 100 110 120 pF1KE1 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 40 50 60 70 80 90 130 140 pF1KE1 PEIARIYKTDREKYNRIAREWTQKYAM ::::::::::::::::::::::::::: CCDS47 PEIARIYKTDREKYNRIAREWTQKYAM 100 110 >>CCDS75172.1 UBE2D3 gene_id:7323|Hs108|chr4 (118 aa) initn: 827 init1: 827 opt: 827 Z-score: 1062.8 bits: 202.3 E(32554): 7.1e-53 Smith-Waterman score: 827; 98.3% identity (100.0% similar) in 118 aa overlap (30-147:1-118) 10 20 30 40 50 60 pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDY ::::::::::::::::::::::::::::::: CCDS75 MFHWQATIMGPNDSPYQGGVFFLTIHFPTDY 10 20 30 70 80 90 100 110 120 pF1KE1 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLV 40 50 60 70 80 90 130 140 pF1KE1 PEIARIYKTDREKYNRIAREWTQKYAM :::::::::::.:::::.::::::::: CCDS75 PEIARIYKTDRDKYNRISREWTQKYAM 100 110 >>CCDS73139.1 UBE2D1 gene_id:7321|Hs108|chr10 (109 aa) initn: 697 init1: 697 opt: 700 Z-score: 901.5 bits: 172.4 E(32554): 6.8e-44 Smith-Waterman score: 700; 89.1% identity (96.4% similar) in 110 aa overlap (38-147:1-109) 10 20 30 40 50 60 pF1KE1 KELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKV : : :: :::::::::.::::::::::::. CCDS73 MTP-DSAYQGGVFFLTVHFPTDYPFKPPKI 10 20 70 80 90 100 110 120 pF1KE1 AFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIY ::::.::::::::::::::::::::::::::.::::::::::::::::::::::.::.:: CCDS73 AFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIY 30 40 50 60 70 80 130 140 pF1KE1 KTDREKYNRIAREWTQKYAM :.:.::::: :::::::::: CCDS73 KSDKEKYNRHAREWTQKYAM 90 100 >>CCDS2282.1 UBE2E3 gene_id:10477|Hs108|chr2 (207 aa) initn: 668 init1: 668 opt: 668 Z-score: 856.7 bits: 165.0 E(32554): 2.1e-41 Smith-Waterman score: 668; 66.4% identity (84.6% similar) in 143 aa overlap (4-146:64-206) 10 20 30 pF1KE1 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHW :::.::: ... ::: .::::: ::....: CCDS22 EQEERKPSATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEW 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE1 QATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQW ..::.:: : :.:::::: : : .:::::::::.: ::::: ::::.: ::::::...: CCDS22 RSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNW 100 110 120 130 140 150 100 110 120 130 140 pF1KE1 SPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM ::::::::::::::::: : :: :::: :: : :.: ...::::.::..:: CCDS22 SPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYAT 160 170 180 190 200 147 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 10:57:57 2016 done: Sun Nov 6 10:57:57 2016 Total Scan time: 1.780 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]