FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1956, 513 aa 1>>>pF1KE1956 513 - 513 aa - 513 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1512+/-0.00101; mu= 15.9009+/- 0.060 mean_var=129.1260+/-26.378, 0's: 0 Z-trim(108.8): 19 B-trim: 40 in 2/48 Lambda= 0.112867 statistics sampled from 10460 (10467) to 10460 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.685), E-opt: 0.2 (0.322), width: 16 Scan time: 2.680 The best scores are: opt bits E(32554) CCDS43218.1 ZCCHC4 gene_id:29063|Hs108|chr4 ( 513) 3621 601.3 8.7e-172 >>CCDS43218.1 ZCCHC4 gene_id:29063|Hs108|chr4 (513 aa) initn: 3621 init1: 3621 opt: 3621 Z-score: 3197.6 bits: 601.3 E(32554): 8.7e-172 Smith-Waterman score: 3621; 99.6% identity (99.8% similar) in 513 aa overlap (1-513:1-513) 10 20 30 40 50 60 pF1KE1 MAASRNGFEAVEAEGSAGCRGSSGMEVVLPLDPAVPAPLCPHGPTLLFVKVTQGKEETRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MAASRNGFEAVEAEGSAGCRGSSGMEVVLPLDPAVPAPLCPHGPTLLFVKVTQGKEETRR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 FYACSACRDRKDCNFFQWEDEKLSGARLAAREAHNRRCQPPLSRTQCVERYLKFIELPLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 FYACSACRDRKDCNFFQWEDEKLSGARLAAREAHNRRCQPPLSRTQCVERYLKFIELPLT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 QRKFCQTCQQLLLPDDWGQHSEHQVLGNVSITQLRRPSQLLYPLENKKTNAQYLFADRSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 QRKFCQTCQQLLLPDDWGQHSEHQVLGNVSITQLRRPSQLLYPLENKKTNAQYLFADRSC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QFLVDLLSALGFRRVLCVGTPRLHELIKLTASGDKKSNIKSLLLDIDFRYSQFYMEDSFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 QFLVDLLSALGFRRVLCVGTPRLHELIKLTASGDKKSNIKSLLLDIDFRYSQFYMEDSFC 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RYNMFNHHFFDGKTALEVCRAFLQEDKGEGIIMVTDPPFGGLVEPLAITFKKLIAMWKEG .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 HYNMFNHHFFDGKTALEVCRAFLQEDKGEGIIMVTDPPFGGLVEPLAITFKKLIAMWKEG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QSQDDSHKELPIFWIFPYFFESRICQFFPSFQMLDYQVDYDNHALYKHGKTGRKQSPVRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 QSQDDSHKELPIFWIFPYFFESRICQFFPSFQMLDYQVDYDNHALYKHGKTGRKQSPVRI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 FTNIPPNKIILPTEEGYRFCSPCQRYVSLENQHCEHCNSCTSKDGRKWNHCFLCKKCVKP ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: CCDS43 FTNIPPNKIILPTEEGYRFCSPCQRYVSLENQHCELCNSCTSKDGRKWNHCFLCKKCVKP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 SWIHCSICNHCAVPDHSCEGPKHGCFICGELDHKRSTCPNIATSKRANKAVRKQKQRKSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 SWIHCSICNHCAVPDHSCEGPKHGCFICGELDHKRSTCPNIATSKRANKAVRKQKQRKSN 430 440 450 460 470 480 490 500 510 pF1KE1 KMKMETTKGQSMNHTSATRRKKRRERAHQYLGS ::::::::::::::::::::::::::::::::: CCDS43 KMKMETTKGQSMNHTSATRRKKRRERAHQYLGS 490 500 510 513 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:43:05 2016 done: Sun Nov 6 05:43:05 2016 Total Scan time: 2.680 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]