FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9458, 731 aa 1>>>pF1KE9458 731 - 731 aa - 731 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.5804+/-0.000899; mu= 15.0995+/- 0.055 mean_var=108.7388+/-22.563, 0's: 0 Z-trim(109.0): 47 B-trim: 519 in 1/50 Lambda= 0.122993 statistics sampled from 10558 (10600) to 10558 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.326), width: 16 Scan time: 2.970 The best scores are: opt bits E(32554) CCDS43162.1 GPR149 gene_id:344758|Hs108|chr3 ( 731) 4828 867.8 0 >>CCDS43162.1 GPR149 gene_id:344758|Hs108|chr3 (731 aa) initn: 4828 init1: 4828 opt: 4828 Z-score: 4632.6 bits: 867.8 E(32554): 0 Smith-Waterman score: 4828; 100.0% identity (100.0% similar) in 731 aa overlap (1-731:1-731) 10 20 30 40 50 60 pF1KE9 MSLFLSNLSTNDSSLWKENHNSTDLLNPPGTLNIYLFCLTCLMTFAALVGSIYSLISLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MSLFLSNLSTNDSSLWKENHNSTDLLNPPGTLNIYLFCLTCLMTFAALVGSIYSLISLLK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 MQNRTVVSMLVASWSVDDLMSVLSVTIFMFLQWPNEVPGYFQFLCTTSALMYLCQGLSSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MQNRTVVSMLVASWSVDDLMSVLSVTIFMFLQWPNEVPGYFQFLCTTSALMYLCQGLSSN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 LKATLLVSYNFYTMHRGVGSQTASRRSGQVLGVVLTVWAASLLLSALPLCGWGAFVRTPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LKATLLVSYNFYTMHRGVGSQTASRRSGQVLGVVLTVWAASLLLSALPLCGWGAFVRTPW 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 GCLVDCSSSYVLFLSIVYALAFGLLVGLSVPLTHRLLCSEEPPRLHSNYQEISRGASIPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 GCLVDCSSSYVLFLSIVYALAFGLLVGLSVPLTHRLLCSEEPPRLHSNYQEISRGASIPG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 TPPTAGRVVSLSPEDAPGPSLRRSGGCSPSSDTVFGPGAPAAAGAEACRRENRGTLYGTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 TPPTAGRVVSLSPEDAPGPSLRRSGGCSPSSDTVFGPGAPAAAGAEACRRENRGTLYGTR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 SFTVSVAQKRFALILALTKVVLWLPMMMHMVVQNVVGFQSLPLETFSFLLTLLATTVTPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 SFTVSVAQKRFALILALTKVVLWLPMMMHMVVQNVVGFQSLPLETFSFLLTLLATTVTPV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE9 FVLSKRWTHLPCGCIINCRQNAYAVASDGKKIKRKGFEFNLSFQKSYGIYKIAHEDYYDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 FVLSKRWTHLPCGCIINCRQNAYAVASDGKKIKRKGFEFNLSFQKSYGIYKIAHEDYYDD 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE9 DENSIFYHNLMNSECETTKDPQRDNRNIFNAIKVEISTTPSLDSSTQRGINKCTNTDITE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 DENSIFYHNLMNSECETTKDPQRDNRNIFNAIKVEISTTPSLDSSTQRGINKCTNTDITE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE9 AKQDSNNKKDAFSDKTGGDINYEETTFSEGPERRLSHEESQKPDLSDWEWCRSKSERTPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 AKQDSNNKKDAFSDKTGGDINYEETTFSEGPERRLSHEESQKPDLSDWEWCRSKSERTPR 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE9 QRSGYALAIPLCAFQGTVSLHAPTGKTLSLSTYEVSAEGQKITPASKKIEVYRSKSVGHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 QRSGYALAIPLCAFQGTVSLHAPTGKTLSLSTYEVSAEGQKITPASKKIEVYRSKSVGHE 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE9 PNSEDSSSTFVDTSVKIHLEVLEICDNEEALDTVSIISNISQSSTQVRSPSLRYSRKENR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PNSEDSSSTFVDTSVKIHLEVLEICDNEEALDTVSIISNISQSSTQVRSPSLRYSRKENR 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE9 FVSCDLGETASYSLFLPTSNPDGDINISIPDTVEAHRQNSKRQHQERDGYQEEIQLLNKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 FVSCDLGETASYSLFLPTSNPDGDINISIPDTVEAHRQNSKRQHQERDGYQEEIQLLNKA 670 680 690 700 710 720 730 pF1KE9 YRKREEESKGS ::::::::::: CCDS43 YRKREEESKGS 730 731 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:47:38 2016 done: Sun Nov 6 06:47:38 2016 Total Scan time: 2.970 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]